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SOS1
HPA
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  • SOS1
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

SOS1
Synonyms GF1, GINGF, HGF
Gene descriptioni

Full gene name according to HGNC.

SOS Ras/Rac guanine nucleotide exchange factor 1
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Cancer-related genes
Disease related genes
Human disease related genes
Plasma proteins
RAS pathway related proteins
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 2
Cytoband p22.1
Chromosome location (bp) 38962206 - 39124345
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

7
Ensembl ENSG00000115904 (version 109)
Entrez gene 6654
HGNC HGNC:11187
UniProt Q07889 (UniProt - Evidence at protein level)
neXtProt NX_Q07889
GeneCards SOS1
Antibodypedia SOS1 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Promotes the exchange of Ras-bound GDP by GTP 1. Probably by promoting Ras activation, regulates phosphorylation of MAP kinase MAPK3 in response to EGF 2. Catalytic component of a trimeric complex that participates in transduction of signals from Ras to Rac by promoting the Rac-specific guanine nucleotide exchange factor (GEF) activity (By similarity).... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Guanine-nucleotide releasing factor
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes a protein that is a guanine nucleotide exchange factor for RAS proteins, membrane proteins that bind guanine nucleotides and participate in signal transduction pathways. GTP binding activates and GTP hydrolysis inactivates RAS proteins. The product of this gene may regulate RAS proteins by facilitating the exchange of GTP for GDP. Mutations in this gene are associated with gingival fibromatosis 1 and Noonan syndrome type 4. [provided by RefSeq, Jul 2008]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
SOS1-201
ENSP00000378479
ENST00000395038
G5E9C8
[Direct mapping] Son of sevenless homolog 1; Son of sevenless homolog 1 (Drosophila), isoform CRA_d
Show all
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
RAS pathway related proteins
Cancer-related genes
   Mutated cancer genes
   Mutational cancer driver genes
Human disease related genes
   Congenital malformations
   Other congenital malformations
   Digestive system diseases
   Mouth and dental diseases
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005085 [guanyl-nucleotide exchange factor activity]
GO:0007264 [small GTPase mediated signal transduction]
GO:0046982 [protein heterodimerization activity]
Show all
1318 aa
150.9 kDa
No 0
SOS1-202
ENSP00000384675
ENST00000402219
Q07889
[Direct mapping] Son of sevenless homolog 1
Show all
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
RAS pathway related proteins
Cancer-related genes
   Mutated cancer genes
   Mutational cancer driver genes
Disease related genes
Human disease related genes
   Congenital malformations
   Other congenital malformations
   Digestive system diseases
   Mouth and dental diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001782 [B cell homeostasis]
GO:0001942 [hair follicle development]
GO:0002260 [lymphocyte homeostasis]
GO:0002931 [response to ischemia]
GO:0003007 [heart morphogenesis]
GO:0003209 [cardiac atrium morphogenesis]
GO:0003344 [pericardium morphogenesis]
GO:0005085 [guanyl-nucleotide exchange factor activity]
GO:0005096 [GTPase activator activity]
GO:0005154 [epidermal growth factor receptor binding]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0005886 [plasma membrane]
GO:0006357 [regulation of transcription by RNA polymerase II]
GO:0007165 [signal transduction]
GO:0007173 [epidermal growth factor receptor signaling pathway]
GO:0007264 [small GTPase mediated signal transduction]
GO:0007265 [Ras protein signal transduction]
GO:0007296 [vitellogenesis]
GO:0007411 [axon guidance]
GO:0008286 [insulin receptor signaling pathway]
GO:0008543 [fibroblast growth factor receptor signaling pathway]
GO:0014069 [postsynaptic density]
GO:0017124 [SH3 domain binding]
GO:0019221 [cytokine-mediated signaling pathway]
GO:0033081 [regulation of T cell differentiation in thymus]
GO:0035264 [multicellular organism growth]
GO:0038095 [Fc-epsilon receptor signaling pathway]
GO:0042127 [regulation of cell population proliferation]
GO:0042129 [regulation of T cell proliferation]
GO:0043025 [neuronal cell body]
GO:0043405 [regulation of MAP kinase activity]
GO:0043539 [protein serine/threonine kinase activator activity]
GO:0043547 [positive regulation of GTPase activity]
GO:0045742 [positive regulation of epidermal growth factor receptor signaling pathway]
GO:0046982 [protein heterodimerization activity]
GO:0048009 [insulin-like growth factor receptor signaling pathway]
GO:0048011 [neurotrophin TRK receptor signaling pathway]
GO:0048514 [blood vessel morphogenesis]
GO:0050853 [B cell receptor signaling pathway]
GO:0050900 [leukocyte migration]
GO:0051057 [positive regulation of small GTPase mediated signal transduction]
GO:0060021 [roof of mouth development]
GO:0061029 [eyelid development in camera-type eye]
GO:0061384 [heart trabecula morphogenesis]
GO:1904693 [midbrain morphogenesis]
GO:1905360 [GTPase complex]
GO:2000973 [regulation of pro-B cell differentiation]
Show all
1333 aa
152.5 kDa
No 0
SOS1-203
ENSP00000393899
ENST00000451331
C9K0N6
[Direct mapping] Son of sevenless homolog 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
RAS pathway related proteins
Cancer-related genes
   Mutated cancer genes
   Mutational cancer driver genes
Human disease related genes
   Congenital malformations
   Other congenital malformations
   Digestive system diseases
   Mouth and dental diseases
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005085 [guanyl-nucleotide exchange factor activity]
GO:0007264 [small GTPase mediated signal transduction]
GO:0046982 [protein heterodimerization activity]
Show all
102 aa
11.8 kDa
No 0
SOS1-208
ENSP00000509424
ENST00000685279
A0A8I5KY52
[Direct mapping] Son of sevenless homolog 1
Show all
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
RAS pathway related proteins
Cancer-related genes
   Mutated cancer genes
   Mutational cancer driver genes
Human disease related genes
   Congenital malformations
   Other congenital malformations
   Digestive system diseases
   Mouth and dental diseases
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005085 [guanyl-nucleotide exchange factor activity]
GO:0007264 [small GTPase mediated signal transduction]
Show all
922 aa
105.3 kDa
No 0
SOS1-217
ENSP00000510437
ENST00000691229
A0A8I5KWL0
[Direct mapping] Son of sevenless homolog 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
RAS pathway related proteins
Cancer-related genes
   Mutated cancer genes
   Mutational cancer driver genes
Human disease related genes
   Congenital malformations
   Other congenital malformations
   Digestive system diseases
   Mouth and dental diseases
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005085 [guanyl-nucleotide exchange factor activity]
GO:0007264 [small GTPase mediated signal transduction]
GO:0046982 [protein heterodimerization activity]
Show all
1086 aa
125.4 kDa
No 0
SOS1-218
ENSP00000508626
ENST00000692089
A0A8I5QJ77
[Direct mapping] Son of sevenless homolog 1
Show all
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
RAS pathway related proteins
Cancer-related genes
   Mutated cancer genes
   Mutational cancer driver genes
Human disease related genes
   Congenital malformations
   Other congenital malformations
   Digestive system diseases
   Mouth and dental diseases
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005085 [guanyl-nucleotide exchange factor activity]
GO:0007264 [small GTPase mediated signal transduction]
GO:0046982 [protein heterodimerization activity]
Show all
1147 aa
132 kDa
No 0
SOS1-219
ENSP00000509138
ENST00000692227
A0A8I5QJD1
[Direct mapping] Son of sevenless homolog 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
RAS pathway related proteins
Cancer-related genes
   Mutated cancer genes
   Mutational cancer driver genes
Human disease related genes
   Congenital malformations
   Other congenital malformations
   Digestive system diseases
   Mouth and dental diseases
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005085 [guanyl-nucleotide exchange factor activity]
GO:0007264 [small GTPase mediated signal transduction]
Show all
404 aa
45.9 kDa
No 0

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