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PCYOX1
HPA
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  • SUMMARY

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  • PCYOX1
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

PCYOX1
Synonyms KIAA0908, PCL1
Gene descriptioni

Full gene name according to HGNC.

Prenylcysteine oxidase 1
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Enzymes
Metabolic proteins
Plasma proteins
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 2
Cytoband p13.3
Chromosome location (bp) 70257386 - 70281185
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

5
Ensembl ENSG00000116005 (version 109)
Entrez gene 51449
HGNC HGNC:20588
UniProt Q9UHG3 (UniProt - Evidence at protein level)
neXtProt NX_Q9UHG3
GeneCards PCYOX1
Antibodypedia PCYOX1 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Prenylcysteine oxidase that cleaves the thioether bond of prenyl-L-cysteines, such as farnesylcysteine and geranylgeranylcysteine 1, 2, 3. Only active against free prenylcysteines and not prenylcysteine residues within prenylated proteins or peptides (By similarity). Involved in the final step in the degradation of prenylated proteins, by degrading prenylcysteines after the protein has been degraded 4.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Oxidoreductase
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

FAD, Flavoprotein
Gene summary (Entrez)i

Useful information about the gene from Entrez

Prenylcysteine is released during the degradation of prenylated proteins. PCYOX1 catalyzes the degradation of prenylcysteine to yield free cysteines and a hydrophobic isoprenoid product (Tschantz et al., 1999).[supplied by OMIM, Mar 2008]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
PCYOX1-201
ENSP00000264441
ENST00000264441
F8W8W4
[Direct mapping] Prenylcysteine oxidase 1
Show all
Metabolic proteins
   MEMSAT3 predicted membrane proteins
   THUMBUP predicted membrane proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
   DeepSig predicted secreted proteins
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001735 [prenylcysteine oxidase activity]
GO:0016491 [oxidoreductase activity]
GO:0016670 [oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor]
GO:0030328 [prenylcysteine catabolic process]
Show all
293 aa
32.3 kDa
Yes 0
PCYOX1-202
ENSP00000413178
ENST00000414812
C9K055
[Direct mapping] Prenylcysteine oxidase 1
Show all
Metabolic proteins
   MEMSAT3 predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001735 [prenylcysteine oxidase activity]
GO:0016491 [oxidoreductase activity]
GO:0016670 [oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor]
GO:0030328 [prenylcysteine catabolic process]
Show all
209 aa
23.4 kDa
No 0
PCYOX1-203
ENSP00000404327
ENST00000422380
C9JGT6
[Direct mapping] Prenylcysteine oxidase 1
Show all
Metabolic proteins
   MEMSAT3 predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001735 [prenylcysteine oxidase activity]
GO:0016491 [oxidoreductase activity]
GO:0016670 [oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor]
GO:0030328 [prenylcysteine catabolic process]
Show all
129 aa
14.9 kDa
No 0
PCYOX1-204
ENSP00000387654
ENST00000433351
Q9UHG3
[Direct mapping] Prenylcysteine oxidase 1
Show all
Enzymes
   ENZYME proteins
   Oxidoreductases
Metabolic proteins
   MEMSAT3 predicted membrane proteins
   THUMBUP predicted membrane proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
   DeepSig predicted secreted proteins
Predicted intracellular proteins
Plasma proteins
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001735 [prenylcysteine oxidase activity]
GO:0005515 [protein binding]
GO:0005764 [lysosome]
GO:0005886 [plasma membrane]
GO:0016491 [oxidoreductase activity]
GO:0016670 [oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor]
GO:0030327 [prenylated protein catabolic process]
GO:0030328 [prenylcysteine catabolic process]
GO:0034361 [very-low-density lipoprotein particle]
GO:0070062 [extracellular exosome]
GO:0071949 [FAD binding]
GO:0102149 [farnesylcysteine lyase activity]
GO:1902476 [chloride transmembrane transport]
Show all
505 aa
56.6 kDa
Yes 0
PCYOX1-205
ENSP00000408751
ENST00000451279
C9JM55
[Direct mapping] Prenylcysteine oxidase 1
Show all
Metabolic proteins
   MEMSAT3 predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001735 [prenylcysteine oxidase activity]
GO:0016491 [oxidoreductase activity]
GO:0016670 [oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor]
GO:0030328 [prenylcysteine catabolic process]
Show all
154 aa
17.7 kDa
No 0

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