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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:74.9 nTPM
HPA Brain:62.0 nTPM
GTEx:74.9 nTPM
FANTOM5:144.8 Scaled Tags Per Million
Mouse:277.3 nTPM
Allen mouse:0.2 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA027101Antibody HPA027135Antibody HPA027317
Glial cells LowLowNot detected
Neuronal cells MediumLowLow







BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

62.0
Sample id Sample description nTPM
Caudate nucleus
nTPM: 56.8
2481 Female, age 94, left hemisphere 84.6
1857 Female, age 85, left hemisphere 68.5
2288 Male, age 75, left hemisphere 61.9
1854 Male, age 80, left hemisphere 54.7
2846 Female, age 79, unknown 51.7
2290 Female, age 72, unknown 50.9
2289 Male, age 61, right hemisphere 42.2
1781 Male, age 74, unknown 40.1
Globus pallidus, externus
nTPM: 58.7
2395 Male, age 75, both hemispheres 74.6
1996 Male, age 80, right hemisphere 70.0
2772 Female, age 79, unknown 67.8
2646 Male, age 61, right hemisphere 46.7
2567 Female, age 72, unknown 34.4
Globus pallidus, internus
nTPM: 62.0
2483 Female, age 94, right hemisphere 74.9
1818 Male, age 74, unknown 69.1
2037 Male, age 80, right hemisphere 65.5
2778 Female, age 91, both hemispheres 64.7
2287 Male, age 75, right hemisphere 64.2
2111 Female, age 85, right hemisphere 53.4
2566 Female, age 72, unknown 42.4
Nucleus accumbens
nTPM: 52.9
2391 Female, age 94, left hemisphere 66.6
2286 Male, age 75, left hemisphere 62.7
1806 Female, age 85, left hemisphere 52.8
1856 Female, age 91, right hemisphere 52.8
2698 Female, age 72, unknown 49.2
2732 Male, age 80, right hemisphere 48.3
2824 Male, age 61, right hemisphere 47.3
1783 Male, age 74, unknown 43.7
Nucleus basalis of Meynert
nTPM: 53.2
2484 Female, age 94, left hemisphere 57.3
2393 Male, age 80, right hemisphere 54.4
2569 Male, age 61, both hemispheres 51.5
2821 Male, age 75, both hemispheres 49.5
Nucleus of the diagonal band
nTPM: 45.0
1812 Female, age 91, both hemispheres 58.1
2029 Male, age 61, right hemisphere 44.8
2775 Male, age 80, right hemisphere 44.1
1979 Male, age 74, unknown 41.6
2195 Female, age 85, both hemispheres 36.4
Putamen
nTPM: 52.4
2482 Female, age 94, left hemisphere 74.9
1937 Female, age 91, right hemisphere 55.5
1829 Male, age 74, unknown 52.9
1838 Male, age 80, right hemisphere 50.9
2466 Female, age 79, unknown 48.2
2489 Female, age 72, unknown 44.7
2647 Male, age 75, left hemisphere 39.8
Septal nuclei
nTPM: 45.3
2199 Male, age 80, right hemisphere 51.7
2031 Female, age 72, unknown 48.8
2009 Female, age 91, both hemispheres 48.3
2394 Male, age 61, left hemisphere 47.7
2059 Female, age 85, both hemispheres 42.4
1960 Male, age 74, unknown 40.6
2629 Female, age 94, right hemisphere 37.5
Stria terminalis, bed nucleus
nTPM: 40.1
1974 Female, age 91, both hemispheres 45.7
2201 Male, age 74, unknown 39.0
2486 Female, age 94, both hemispheres 35.4

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

74.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 74.3
Samples: 246

Max nTPM: 146.8
Min nTPM: 44.1
Std nTPM: 15.8
Median nTPM: 71.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 146.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 137.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 120.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 118.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 115.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 110.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 110.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 109.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 109.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 108.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 106.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 106.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 104.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 103.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 103.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 102.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 100.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 99.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 98.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 97.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 97.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 96.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 96.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 96.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 95.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 95.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 95.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 94.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 94.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 93.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 93.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 93.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 91.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 91.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 90.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 90.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 89.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 89.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 89.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 88.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 88.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 88.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 88.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 87.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 87.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 87.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 86.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 86.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 86.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 86.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 86.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 86.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 85.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 85.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 84.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 84.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 84.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 83.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 83.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 83.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 83.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 82.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 82.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 82.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 82.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 81.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 81.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 81.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 81.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 81.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 80.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 80.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 80.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 80.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 80.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 79.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 79.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 79.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 79.4
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 79.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 79.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 79.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 79.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 78.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 78.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 78.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 78.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 78.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 78.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 77.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 77.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 76.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 76.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 76.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 76.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 76.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 76.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 76.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 76.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 75.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 75.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 75.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 74.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 74.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 74.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 74.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 73.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 73.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 73.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 73.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 73.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 72.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 72.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 72.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 72.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 72.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 72.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 71.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 71.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 71.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 71.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 71.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 71.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 71.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 71.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 71.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 70.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 70.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 70.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 70.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 70.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 70.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 69.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 69.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 69.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 69.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 69.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 68.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 68.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 68.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 68.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 67.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 67.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 67.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 67.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 67.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 66.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 66.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 66.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 66.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 66.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 66.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 66.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 66.0
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 65.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 65.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 65.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 65.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 65.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 65.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 64.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 64.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 64.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 64.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 64.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 64.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 64.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 64.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 64.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 64.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 64.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 64.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 64.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 64.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 63.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 63.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 63.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 63.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 63.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 62.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 62.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 62.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 62.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 62.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 62.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 62.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 62.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 61.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 61.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 61.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 61.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 61.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 61.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 61.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 61.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 61.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 61.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 61.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 61.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 61.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 61.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 61.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 61.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 61.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 60.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 60.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 60.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 60.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 59.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 59.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 59.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 59.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 59.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 59.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 59.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 59.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 58.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 58.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 58.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 58.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 58.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 57.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 57.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 57.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 57.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 57.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 56.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 56.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 56.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 56.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 55.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 55.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 55.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 54.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 54.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 54.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 53.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 53.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 53.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 53.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 52.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 52.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 51.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 48.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 46.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 44.1
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 66.5
Samples: 246

Max nTPM: 169.6
Min nTPM: 36.7
Std nTPM: 17.2
Median nTPM: 62.5
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 169.6
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 149.3
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 118.1
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 111.6
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 105.4
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 104.6
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 103.7
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 101.6
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 100.5
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 99.4
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 98.9
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 97.7
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 96.1
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 95.3
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 94.8
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 94.4
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 93.7
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 93.1
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 91.8
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 91.5
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 91.4
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 89.7
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 89.1
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 88.9
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 88.8
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 88.8
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 88.2
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 88.2
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 87.9
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 87.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 86.3
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 85.7
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 85.0
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 84.4
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 83.9
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 83.6
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 83.4
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 83.4
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 83.0
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 82.7
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 81.7
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 81.4
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 81.0
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 81.0
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 80.8
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 80.4
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 80.3
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 80.3
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 79.9
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 79.7
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 79.2
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 79.0
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 78.4
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 78.0
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 77.8
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 77.7
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 77.4
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 77.3
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 77.2
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 77.1
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 76.7
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 76.4
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 75.7
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 75.6
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 74.9
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 74.3
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 74.3
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 73.5
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 73.3
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 72.9
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 72.8
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 72.3
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 72.1
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 72.0
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 71.4
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 71.4
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 71.2
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 71.0
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 70.8
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 70.7
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 70.7
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 70.1
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 70.1
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 69.7
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 69.6
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 69.4
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 69.3
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 69.1
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 68.6
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 68.1
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 67.5
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 67.4
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 67.0
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 66.9
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 66.9
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 66.3
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 66.0
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 65.8
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 65.8
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 65.5
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 65.4
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 65.0
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 65.0
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 64.9
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 64.4
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 64.4
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 64.3
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 64.1
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 63.9
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 63.8
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 63.7
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 63.4
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 63.4
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 63.3
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 63.2
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 63.2
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 63.2
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 63.1
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 63.1
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 63.1
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 62.6
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 62.6
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 62.5
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 62.4
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 62.2
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 62.2
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 62.1
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 61.6
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 61.6
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 61.6
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 61.5
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 61.5
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 61.5
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 61.4
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 61.4
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 61.3
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 60.8
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 60.8
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 60.4
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 60.4
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 60.1
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 59.8
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 59.7
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 59.3
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 59.2
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 59.2
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 59.1
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 59.0
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 58.9
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 58.8
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 58.8
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 58.6
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 58.3
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 58.2
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 58.1
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 58.0
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 58.0
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 57.9
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 57.9
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 57.6
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 57.5
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 57.1
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 56.9
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 56.9
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 56.7
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 56.6
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 56.6
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 56.4
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 56.4
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 56.4
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 56.3
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 56.0
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 55.6
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 55.6
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 55.6
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 55.2
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 55.0
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 54.9
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 54.9
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 54.8
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 54.7
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 54.6
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 54.4
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 54.3
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 54.3
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 54.1
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 54.0
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 53.9
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 53.5
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 53.2
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 53.2
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 53.0
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 53.0
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 52.9
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 52.8
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 52.8
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 52.4
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 52.3
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 52.3
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 52.3
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 52.2
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 52.0
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 52.0
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 51.9
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 51.8
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 51.8
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 51.8
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 51.6
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 51.5
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 51.4
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 51.4
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 51.3
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 51.2
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 50.8
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 50.7
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 50.7
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 50.5
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 50.3
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 50.1
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 49.9
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 49.9
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 49.8
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 49.7
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 49.6
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 49.5
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 49.4
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 49.3
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 49.2
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 49.1
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 49.0
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 48.8
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 48.5
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 47.9
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 47.9
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 47.7
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 47.2
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 47.1
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 46.9
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 45.4
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 44.6
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 44.5
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 44.1
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 44.1
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 40.0
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 39.0
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 36.7
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Brain - Putamen (basal ganglia)
Average nTPM: 74.9
Samples: 205

Max nTPM: 162.4
Min nTPM: 46.6
Std nTPM: 17.9
Median nTPM: 71.1
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 162.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 150.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 135.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 119.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 113.5
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 110.6
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 108.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 108.2
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 107.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 106.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 106.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 105.8
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 104.3
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 103.7
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 103.3
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 102.9
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 102.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 101.7
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 101.3
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 101.2
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 101.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 101.0
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 99.9
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 98.7
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 98.6
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 95.9
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 95.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 94.5
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 94.0
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 93.1
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 92.1
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 91.9
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 91.8
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 91.7
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 91.3
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 91.2
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 91.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 90.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 88.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 87.9
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 87.8
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 87.4
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 86.4
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 86.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 85.3
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 85.2
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 85.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 84.9
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 84.1
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 84.1
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 83.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 83.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 83.3
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 83.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 82.5
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 82.2
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 82.0
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 81.8
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 81.2
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 81.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 81.0
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 80.9
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 79.7
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 79.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 79.7
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 79.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 79.4
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 79.3
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 78.8
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 78.6
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 78.5
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 78.1
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 77.9
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 77.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 77.6
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 77.2
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 76.8
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 76.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 76.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 76.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 75.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 75.5
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 75.4
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 75.2
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 74.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 74.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 74.4
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 74.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 73.7
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 73.6
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 73.0
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 72.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 72.8
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 72.7
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 72.3
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 72.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 71.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 71.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 71.6
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 71.4
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 71.4
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 71.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 71.1
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 71.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 71.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 71.0
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 70.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 70.6
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 70.6
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 70.5
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 69.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 69.6
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 69.4
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 68.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 68.7
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 68.7
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 68.6
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 68.0
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 67.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 67.8
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 67.7
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 67.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 66.8
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 66.6
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 66.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 66.3
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 66.1
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 65.8
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 65.8
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 65.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 65.7
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 65.6
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 65.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 65.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 65.3
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 65.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 65.1
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 65.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 64.9
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 64.8
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 64.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 64.7
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 64.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 64.4
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 64.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 64.3
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 64.3
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 64.1
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 64.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 64.0
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 63.9
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 63.5
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 63.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 62.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 62.6
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 62.5
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 62.3
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 61.6
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 61.6
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 61.6
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 61.2
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 61.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 61.1
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 60.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 60.7
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 60.7
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 60.7
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 60.6
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 60.5
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 59.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 59.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 59.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 58.8
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 58.8
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 58.3
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 58.2
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 58.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 57.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 57.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 57.5
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 57.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 57.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 56.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 56.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 56.0
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 56.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 55.6
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 55.2
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 54.9
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 54.3
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 53.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 53.2
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 53.0
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 52.1
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 52.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 51.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 51.6
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 51.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 50.8
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 50.7
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 50.1
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 50.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 47.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 47.4
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 46.6
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

144.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 136.5
FF:10164-103B2 76 years, female 136.5
Nucleus accumbens
Scaled Tags Per Million: 105.9
FF:10037-101F1 23-56 years, mixed 105.9
Putamen
Scaled Tags Per Million: 132.0
FF:10176-103C5 60 years, female 132.0
Globus pallidus
Scaled Tags Per Million: 144.8
FF:10175-103C4 60 years, female 163.2
FF:10161-103A8 76 years, female 126.5

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

277.3
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 277.3
Samples: 4

Max nTPM: 288.5
Min nTPM: 265.1
Sample A Male 275.1
Sample B Male 265.1
Sample C Female 280.4
Sample D Female 288.5
Septum
nTPM: 258.0
Samples: 4

Max nTPM: 281.7
Min nTPM: 224.4
Sample A Male 224.4
Sample B Male 281.7
Sample C Female 271.8
Sample D Female 254.2
Ventral forebrain
nTPM: 246.7
Samples: 4

Max nTPM: 257.0
Min nTPM: 235.3
Sample A Male 235.3
Sample B Male 245.8
Sample C Female 257.0
Sample D Female 248.6

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.2
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.1
68300926 Antisense, RP_041129_02_D09, Mouse strain C57BL/6J (56 days, male) 0.1
Pallidum
Expression energy: 0.2
68300926 Antisense, RP_041129_02_D09, Mouse strain C57BL/6J (56 days, male) 0.2

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