We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
SCAMP3
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • SCAMP3
TISSUE HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
Dictionary
Tissue proteome
Hypothalamus
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:32.1 nTPM
HPA Brain:8.2 nTPM
GTEx:32.1 nTPM
Pig:63.4 nTPM
Mouse:44.0 nTPM
Allen mouse:2.1 Expression energy

HYPOTHALAMUS - Annotated protein expression
Pending normal tissue analysis

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

8.2
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 6.0
1961 Female, age 42, unknown 6.5
2226 Male, age 75, left hemisphere 5.6
Dorsomedial nucleus
nTPM: 6.6
1989 Male, age 62, unknown 8.0
2017 Female, age 42, unknown 7.5
2041 Female, age 72, unknown 4.4
Lateral hypothalamic area
nTPM: 8.2
2228 Male, age 66, unknown 10.4
1791 Male, age 80, right hemisphere 10.3
2271 Male, age 75, both hemispheres 7.9
2412 Male, age 62, unknown 3.9
Mammillary body
nTPM: 8.0
1945 Male, age 80, right hemisphere 11.7
1948 Female, age 72, unknown 9.6
1923 Female, age 72, unknown 8.9
1834 Female, age 42, unknown 5.9
2413 Male, age 66, unknown 3.7
Paraventricular nucleus
nTPM: 6.5
2700 Male, age 62, unknown 6.5
Preoptic area
nTPM: 6.3
2414 Female, age 72, unknown 9.3
1907 Male, age 80, right hemisphere 6.2
1861 Female, age 42, unknown 3.5
Supraoptic nucleus
nTPM: 6.7
2835 Female, age 72, unknown 8.4
2043 Male, age 62, unknown 7.1
1894 Female, age 72, unknown 4.6
Ventromedial nucleus
nTPM: 3.3
1982 Female, age 72, unknown 4.4
1822 Female, age 42, unknown 2.2

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

32.1
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 32.1
Samples: 202

Max nTPM: 57.1
Min nTPM: 15.9
Std nTPM: 6.9
Median nTPM: 32.0
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 57.1
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 50.6
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 50.4
GTEX-XLM4-0011-R8A-SM-4AT44 60-69 years, male 49.4
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 48.2
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 47.6
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 46.3
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 44.2
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 43.9
GTEX-TSE9-0011-R8A-SM-3DB7R 60-69 years, female 43.8
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 42.7
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 42.6
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 42.4
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 42.3
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 42.2
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 42.2
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 42.2
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 42.2
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 41.2
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 40.9
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 40.4
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 40.4
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 40.0
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 40.0
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 39.9
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 39.5
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 39.3
GTEX-13NZ8-0011-R8b-SM-5KM48 60-69 years, female 39.3
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 39.1
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 39.0
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 38.8
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 38.3
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 38.1
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 38.1
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 38.1
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 37.9
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 37.8
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 37.6
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 37.6
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 37.5
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 37.3
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 37.1
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 37.0
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 37.0
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 36.9
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 36.9
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 36.9
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 36.9
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 36.8
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 36.7
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 36.6
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 36.4
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 36.3
GTEX-Q2AG-0011-R8A-SM-2HMK5 40-49 years, female 36.2
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 36.2
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 36.1
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 36.0
GTEX-NPJ7-0011-R8a-SM-2I3G2 60-69 years, female 36.0
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 36.0
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 35.8
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 35.7
GTEX-OHPN-0011-R8A-SM-33HBT 60-69 years, female 35.7
GTEX-183WM-0011-R8a-SM-7189W 70-79 years, female 35.6
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 35.5
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 35.5
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 35.3
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 35.1
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 35.0
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 34.9
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 34.9
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 34.8
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 34.6
GTEX-N7MT-0011-R8a-SM-2I5GU 60-69 years, female 34.4
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 34.4
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 34.3
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 34.2
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 34.2
GTEX-R55E-0011-R8A-SM-2TC66 20-29 years, male 34.0
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 33.9
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 33.8
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 33.8
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 33.7
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 33.6
GTEX-RU72-0011-R8A-SM-2TF61 50-59 years, female 33.6
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 33.5
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 33.5
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 33.4
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 33.3
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 33.1
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 33.0
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 33.0
GTEX-X4EP-0011-R8B-SM-4QASL 60-69 years, female 32.8
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 32.8
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 32.8
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 32.8
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 32.7
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 32.2
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 32.2
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 32.2
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 32.1
GTEX-13IVO-0011-R8a-SM-5L3DY 70-79 years, male 32.0
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 31.9
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 31.9
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 31.8
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 31.8
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 31.7
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 31.6
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 31.3
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 31.2
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 31.1
GTEX-18464-0011-R8a-SM-72D4Z 50-59 years, male 31.0
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 31.0
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 30.8
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 30.8
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 30.7
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 30.7
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 30.7
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 30.6
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 30.6
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 30.6
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 30.5
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 30.5
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 30.4
GTEX-QDT8-0011-R8A-SM-32PKE 30-39 years, female 30.3
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 30.3
GTEX-145MI-0011-R8b-SM-5PNZ9 60-69 years, female 30.2
GTEX-1H3VE-0011-R8b-SM-A9G1L 40-49 years, male 30.0
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 29.8
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 29.7
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 29.7
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 29.2
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 29.0
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 29.0
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 28.9
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 28.6
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 28.6
GTEX-NL3H-0011-R8a-SM-DIPDY 60-69 years, male 28.6
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 28.3
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 28.3
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 28.1
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 28.0
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 28.0
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 27.8
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 27.7
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 27.6
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 27.6
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 27.5
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 27.4
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 27.3
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 27.2
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 27.2
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 27.0
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 26.7
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 26.7
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 26.6
GTEX-14LLW-0011-R8a-SM-62LFG 70-79 years, female 26.4
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 26.4
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 26.4
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 26.1
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 26.1
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 25.9
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 25.8
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 25.8
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 25.8
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 25.8
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 25.6
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 25.4
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 25.0
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 24.9
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 24.9
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 24.8
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 24.6
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 24.4
GTEX-S7SE-0011-R8A-SM-2XCDG 50-59 years, male 24.3
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 24.2
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 24.1
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 23.9
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 23.9
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 23.7
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 23.7
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 23.2
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 23.0
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 22.9
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 22.8
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 22.6
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 22.6
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 22.5
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 22.3
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 22.3
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 22.0
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 21.7
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 21.6
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 21.4
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 20.5
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 19.8
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 19.8
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 19.5
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 19.1
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 19.1
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 18.1
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 17.4
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 15.9
Show allShow less

HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

63.4
Pig sample Sample description nTPM
Hypothalamus
nTPM: 63.4
Samples: 4

Max nTPM: 83.3
Min nTPM: 50.2
Sample A Female 83.3
Sample B Female 62.4
Sample C Male 57.6
Sample D Male 50.2

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

44.0
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 44.0
Samples: 4

Max nTPM: 49.9
Min nTPM: 38.5
Sample A Male 46.2
Sample B Male 49.9
Sample C Female 41.5
Sample D Female 38.5

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

2.1
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 2.1
75695653 Antisense, RP_060518_04_C04, Mouse strain C57BL/6J (56 days, male) 2.1

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org