HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:24.6 nTPM
HPA Brain:79.9 nTPM
GTEx:24.6 nTPM
FANTOM5:131.3 Scaled Tags Per Million
Pig:58.9 nTPM
Mouse:14.3 nTPM
Allen mouse:5.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA005809
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 79.9
Sample id Sample description nTPM
Hippocampus
nTPM: 56.0
2621 Female, age 67, right hemisphere 64.1
1855 Male, age 76, left hemisphere 58.5
2529 Female, age 94, left hemisphere 57.0
1911 Female, age 85, right hemisphere 54.4
1898 Male, age 80, left hemisphere 51.5
2148 Female, age 91, left hemisphere 50.3
Dentate gyrus
nTPM: 56.3
2531 Female, age 67, both hemispheres 64.5
2530 Female, age 94, left hemisphere 62.8
2010 Male, age 76, both hemispheres 55.2
2246 Female, age 85, both hemispheres 54.3
1927 Female, age 91, both hemispheres 53.4
2528 Male, age 74, both hemispheres 48.0
Entorhinal gyrus
nTPM: 77.2
2613 Female, age 94, left hemisphere 107.0
2686 Male, age 75, right hemisphere 76.2
1938 Female, age 85, left hemisphere 75.3
2764 Male, age 80, right hemisphere 72.5
1787 Male, age 76, left hemisphere 71.0
2117 Female, age 91, right hemisphere 61.4
Hippocampus, CA1
nTPM: 58.1
2045 Male, age 76, both hemispheres 65.1
2749 Male, age 80, left hemisphere 60.7
2527 Male, age 74, both hemispheres 56.9
2082 Female, age 91, right hemisphere 56.6
1873 Female, age 85, both hemispheres 51.4
Hippocampus, CA2
nTPM: 60.5
2437 Female, age 94, left hemisphere 64.0
1892 Male, age 76, both hemispheres 63.8
1940 Female, age 85, left hemisphere 62.1
2113 Female, age 91, right hemisphere 61.9
1963 Male, age 80, left hemisphere 57.0
2249 Male, age 74, both hemispheres 54.2
Hippocampus, CA3
nTPM: 61.7
2137 Male, age 80, left hemisphere 69.9
1867 Male, age 76, both hemispheres 69.7
2620 Female, age 94, left hemisphere 63.4
2861 Female, age 67, both hemispheres 57.0
1891 Female, age 85, both hemispheres 56.7
2436 Male, age 74, both hemispheres 53.5
Parahippocampal cortex
nTPM: 76.6
2532 Female, age 72, left hemisphere 99.2
1850 Male, age 80, both hemispheres 88.8
2622 Female, age 67, right hemisphere 85.8
2693 Female, age 94, both hemispheres 85.0
2245 Female, age 91, both hemispheres 82.3
1990 Female, age 91, right hemisphere 72.9
2692 Male, age 74, both hemispheres 68.5
1933 Female, age 85, both hemispheres 63.4
2018 Male, age 76, both hemispheres 60.7
2250 Female, age 67, right hemisphere 59.6
Perirhinal gyrus
nTPM: 79.9
2848 Male, age 76, right hemisphere 83.1
1841 Female, age 85, right hemisphere 82.8
1794 Male, age 80, right hemisphere 80.4
1847 Female, age 91, left hemisphere 76.5
2521 Female, age 94, right hemisphere 76.4
Subiculum
nTPM: 62.3
2438 Female, age 94, left hemisphere 67.7
2042 Male, age 76, both hemispheres 65.7
1901 Male, age 80, both hemispheres 65.3
2619 Male, age 74, both hemispheres 63.9
1977 Female, age 85, both hemispheres 63.0
2729 Female, age 91, right hemisphere 47.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 24.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 24.6
Samples: 197

Max nTPM: 59.1
Min nTPM: 14.6
Std nTPM: 6.3
Median nTPM: 23.2
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 59.1
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 51.7
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 45.6
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 44.2
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 42.4
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 41.8
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 40.7
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 39.2
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 38.0
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 37.4
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 37.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 131.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 131.3
FF:10169-103B7 60 years, female 146.4
FF:10153-102I9 76 years, female 116.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 58.9
Pig sample Sample description nTPM
Subiculum
nTPM: 46.1
Samples: 4

Max nTPM: 61.2
Min nTPM: 37.9
Sample A Female 61.2
Sample B Female 42.7
Sample C Male 42.4
Sample D Male 37.9
Dorsal hippocampus
nTPM: 42.0
Samples: 4

Max nTPM: 47.3
Min nTPM: 31.3
Sample A Female 46.1
Sample B Female 43.3
Sample C Male 47.3
Sample D Male 31.3
Entorhinal cortex
nTPM: 58.9
Samples: 4

Max nTPM: 63.1
Min nTPM: 53.5
Sample A Female 61.3
Sample B Female 57.7
Sample C Male 53.5
Sample D Male 63.1
Ventral hippocampus
nTPM: 42.2
Samples: 4

Max nTPM: 50.8
Min nTPM: 31.4
Sample A Female 37.9
Sample B Female 31.4
Sample C Male 50.8
Sample D Male 48.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 14.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 14.3
Samples: 4

Max nTPM: 16.7
Min nTPM: 13.3
Sample A Male 13.6
Sample B Male 13.5
Sample C Female 13.3
Sample D Female 16.7
Hippocampal formation
nTPM: 13.9
Samples: 4

Max nTPM: 16.2
Min nTPM: 11.6
Sample A Male 11.6
Sample B Male 15.9
Sample C Female 16.2
Sample D Female 11.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 5.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.0
69289745 Antisense, RP_050407_03_G05, Mouse strain C57BL/6J (56 days, male) 5.0

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