PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:316.4 nTPM
FANTOM5:146.2 Scaled Tags Per Million
Pig:38.5 nTPM
Mouse:25.9 nTPM
Allen mouse:1.2 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 316.4
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 235.6
2301 Female, age 85, both hemispheres 334.4
2188 Female, age 91, both hemispheres 254.2
2090 Male, age 80, both hemispheres 236.0
1984 Male, age 76, both hemispheres 117.7
Area postrema
nTPM: 124.0
2306 Male, age 80, both hemispheres 198.8
2799 Male, age 61, both hemispheres 93.3
2054 Male, age 76, both hemispheres 80.0
Dorsal cochlear nucleus
nTPM: 179.0
2187 Female, age 91, both hemispheres 274.2
2802 Male, age 74, right hemisphere 180.1
2378 Male, age 80, both hemispheres 169.0
2370 Male, age 61, both hemispheres 142.9
2058 Male, age 76, both hemispheres 128.6
Dorsal medullary reticular nucleus
nTPM: 187.1
2373 Male, age 61, both hemispheres 211.0
2088 Male, age 76, both hemispheres 200.5
2040 Female, age 85, both hemispheres 149.7
Dorsal motor vagal complex
nTPM: 118.4
2185 Male, age 76, both hemispheres 221.2
2000 Male, age 74, unknown 126.3
2797 Male, age 61, both hemispheres 118.3
2643 Male, age 74, both hemispheres 110.4
2133 Female, age 91, both hemispheres 102.4
2807 Female, age 85, both hemispheres 98.5
2844 Male, age 55, unknown 85.5
2813 Female, age 72, unknown 84.3
Dorsal tegmental nucleus
nTPM: 169.9
2083 Male, age 80, both hemispheres 214.2
2326 Male, age 74, both hemispheres 179.0
1936 Male, age 76, left hemisphere 151.4
2358 Male, age 61, both hemispheres 135.0
Dorsolateral tegmental area
nTPM: 174.7
2751 Female, age 85, both hemispheres 245.3
2337 Male, age 61, both hemispheres 228.5
2654 Male, age 80, both hemispheres 208.3
2360 Male, age 74, both hemispheres 101.8
2141 Male, age 76, both hemispheres 89.5
Gigantocellular reticular nuclei, medullary
nTPM: 206.2
2314 Male, age 61, both hemispheres 384.9
2310 Male, age 80, both hemispheres 211.0
2387 Female, age 91, both hemispheres 210.8
1876 Female, age 85, both hemispheres 184.6
2462 Male, age 74, both hemispheres 126.2
2022 Male, age 76, right hemisphere 119.7
Gigantocellular reticular nuclei, pars
nTPM: 191.5
2336 Male, age 61, both hemispheres 216.9
2330 Male, age 80, both hemispheres 207.0
2706 Male, age 80, both hemispheres 203.3
2168 Male, age 76, both hemispheres 186.7
2084 Female, age 85, both hemispheres 143.8
Inferior olive
nTPM: 199.9
2178 Male, age 61, both hemispheres 275.0
2628 Female, age 91, both hemispheres 228.8
2563 Male, age 74, both hemispheres 176.4
2085 Female, age 85, both hemispheres 168.4
2379 Male, age 80, both hemispheres 150.9
Kolliker-Fuse nucleus
nTPM: 196.4
2793 Female, age 91, left hemisphere 310.6
2163 Male, age 80, both hemispheres 168.5
2315 Male, age 76, right hemisphere 110.0
Lateral lemniscal nuclei
nTPM: 201.1
2320 Female, age 91, left hemisphere 244.7
2036 Male, age 80, both hemispheres 206.6
2746 Female, age 85, left hemisphere 201.8
2169 Male, age 76, both hemispheres 182.2
2453 Male, age 74, right hemisphere 170.3
Lateral medullary reticular nucleus
nTPM: 229.4
2852 Male, age 80, both hemispheres 304.0
2374 Male, age 61, both hemispheres 286.2
2305 Male, age 74, both hemispheres 247.6
2044 Male, age 76, both hemispheres 189.7
2190 Female, age 85, both hemispheres 187.6
2804 Female, age 91, both hemispheres 161.5
Lateral parabrachial nucleus
nTPM: 182.1
2792 Male, age 76, both hemispheres 219.9
2013 Male, age 80, both hemispheres 206.7
2790 Male, age 61, both hemispheres 161.8
2139 Female, age 85, right hemisphere 139.9
Lateral vestibular nucleus
nTPM: 218.2
2311 Male, age 80, both hemispheres 261.3
2184 Male, age 76, both hemispheres 175.2
Locus coeruleus
nTPM: 78.7
2720 Male, age 74, both hemispheres 126.9
2162 Male, age 80, both hemispheres 108.3
2123 Female, age 91, both hemispheres 77.9
2317 Female, age 72, unknown 68.7
2014 Male, age 55, unknown 62.3
2788 Male, age 74, unknown 61.3
1980 Male, age 76, both hemispheres 45.8
Medial olivary nucleus
nTPM: 248.9
1962 Male, age 76, both hemispheres 293.6
1943 Male, age 61, both hemispheres 278.4
2851 Male, age 80, both hemispheres 235.8
2138 Female, age 91, both hemispheres 187.9
Medial parabrachial nucleus
nTPM: 234.2
2170 Female, age 91, both hemispheres 345.6
2854 Male, age 80, both hemispheres 257.9
2463 Female, age 85, right hemisphere 233.5
2786 Male, age 76, both hemispheres 177.3
2156 Male, age 61, both hemispheres 156.6
Medial periolivary nuclei
nTPM: 197.3
2081 Male, age 80, both hemispheres 255.2
2458 Female, age 91, both hemispheres 242.1
2063 Male, age 76, both hemispheres 174.5
2171 Female, age 85, both hemispheres 159.3
2791 Male, age 74, right hemisphere 155.2
Medial vestibular nucleus
nTPM: 186.2
2801 Male, age 74, both hemispheres 259.9
2624 Male, age 61, both hemispheres 232.1
2093 Male, age 80, both hemispheres 205.2
2803 Female, age 91, both hemispheres 197.8
2743 Female, age 85, both hemispheres 140.2
2134 Male, age 76, both hemispheres 81.7
Motor facial nucleus
nTPM: 196.6
2126 Male, age 61, both hemispheres 269.5
2697 Female, age 85, both hemispheres 210.1
2365 Male, age 74, right hemisphere 181.7
2795 Female, age 91, both hemispheres 179.5
2327 Male, age 80, both hemispheres 173.6
2062 Male, age 76, both hemispheres 165.3
Motor hypoglossal nucleus
nTPM: 178.8
2182 Male, age 80, both hemispheres 306.7
2125 Female, age 91, both hemispheres 235.7
2132 Female, age 85, both hemispheres 180.8
2461 Male, age 61, both hemispheres 114.6
2277 Male, age 76, both hemispheres 56.3
Motor trigeminal nucleus
nTPM: 198.6
2321 Female, age 91, both hemispheres 278.4
2560 Male, age 74, both hemispheres 206.8
2079 Male, age 80, both hemispheres 193.2
2335 Male, age 61, both hemispheres 163.0
2309 Male, age 76, both hemispheres 151.3
Nuclei of the trapezoid body
nTPM: 191.8
2166 Male, age 80, both hemispheres 252.8
2159 Male, age 61, both hemispheres 207.2
2368 Female, age 91, both hemispheres 193.0
1983 Male, age 76, both hemispheres 164.2
2735 Female, age 85, both hemispheres 141.7
Nucleus ambiguus
nTPM: 208.6
2071 Male, age 76, both hemispheres 255.1
2096 Female, age 85, both hemispheres 162.1
Nucleus cuneatus
nTPM: 227.1
2100 Male, age 76, both hemispheres 294.7
2380 Male, age 80, both hemispheres 266.4
2376 Male, age 61, both hemispheres 264.5
2381 Male, age 80, both hemispheres 258.1
2805 Female, age 91, both hemispheres 222.1
2808 Female, age 85, both hemispheres 218.3
2131 Male, age 76, both hemispheres 197.9
2564 Male, age 74, both hemispheres 190.7
2562 Male, age 61, both hemispheres 131.7
Nucleus gracilis
nTPM: 227.0
2382 Male, age 80, both hemispheres 313.1
2627 Male, age 74, both hemispheres 201.7
2299 Female, age 85, both hemispheres 166.3
Nucleus raphe magnus
nTPM: 189.4
2051 Male, age 76, both hemispheres 251.1
2459 Female, age 91, both hemispheres 229.0
2328 Male, age 80, both hemispheres 202.3
2160 Male, age 61, both hemispheres 158.0
2455 Male, age 74, both hemispheres 148.6
2172 Female, age 85, both hemispheres 147.4
Nucleus raphe obscurus
nTPM: 316.4
2800 Male, age 61, midline 342.7
2142 Male, age 76, midline 310.7
2845 Female, age 85, midline 296.0
Nucleus raphe pallidus
nTPM: 268.2
2145 Male, age 76, midline 335.8
2183 Male, age 80, midline 240.0
1924 Male, age 61, midline 228.8
Nucleus tractus solitarii
nTPM: 65.9
2656 Male, age 76, both hemispheres 80.2
2307 Male, age 80, both hemispheres 67.3
2191 Female, age 85, both hemispheres 62.3
2144 Female, age 91, right hemisphere 53.7
Paramedian reticular nucleus
nTPM: 165.3
2050 Female, age 85, both hemispheres 182.5
2057 Male, age 80, both hemispheres 175.4
2052 Male, age 76, both hemispheres 173.4
2313 Male, age 61, both hemispheres 130.0
Parvicellular reticular nuclei
nTPM: 217.2
2095 Male, age 76, both hemispheres 263.2
2119 Male, age 80, both hemispheres 213.7
2558 Male, age 74, both hemispheres 174.7
Parvicellular reticular nuclei, medullary
nTPM: 138.7
2189 Female, age 91, both hemispheres 173.8
2181 Male, age 80, left hemisphere 125.2
2091 Female, age 85, both hemispheres 117.1
Pedunculopontine tegmental nucleus
nTPM: 137.8
2338 Male, age 61, both hemispheres 157.3
2334 Male, age 80, both hemispheres 150.9
1921 Female, age 85, both hemispheres 105.1
Peritrigeminal nucleus
nTPM: 206.0
2179 Male, age 61, both hemispheres 230.6
2136 Male, age 76, both hemispheres 215.7
2067 Female, age 85, both hemispheres 171.6
Pontine nuclei
nTPM: 219.3
2319 Female, age 91, both hemispheres 263.1
2115 Male, age 80, left hemisphere 240.6
2454 Male, age 74, left hemisphere 237.5
2109 Female, age 72, unknown 235.0
1968 Male, age 76, left hemisphere 218.4
1863 Male, age 55, unknown 215.7
2787 Female, age 85, both hemispheres 190.9
2727 Male, age 61, right hemisphere 153.6
Pontine raphe nucleus
nTPM: 136.1
2122 Female, age 85, midline 152.9
2853 Male, age 76, midline 119.4
Posteroventral cochlear nucleus
nTPM: 193.5
2135 Female, age 91, both hemispheres 261.1
2341 Male, age 80, both hemispheres 260.9
2070 Male, age 76, both hemispheres 172.9
2371 Male, age 61, both hemispheres 153.4
2752 Female, age 85, both hemispheres 119.2
Prepositus hypoglossal nucleus
nTPM: 177.7
2855 Female, age 85, right hemisphere 232.1
2086 Male, age 80, both hemispheres 123.2
Principal sensory trigeminal nucleus
nTPM: 194.7
2367 Female, age 91, left hemisphere 268.6
2008 Male, age 80, left hemisphere 181.2
2158 Male, age 61, both hemispheres 174.1
2324 Male, age 76, both hemispheres 155.0
Reticular pontine nucleus, caudal
nTPM: 217.4
2559 Male, age 74, both hemispheres 250.6
2457 Female, age 91, both hemispheres 240.2
2332 Male, age 80, right hemisphere 191.8
2092 Male, age 76, both hemispheres 187.1
Reticular pontine nucleus, oral
nTPM: 211.0
2366 Female, age 91, both hemispheres 249.5
2361 Male, age 74, both hemispheres 243.5
2012 Female, age 85, both hemispheres 191.6
1939 Male, age 80, both hemispheres 190.3
2167 Male, age 76, both hemispheres 180.2
Reticulotegmental nucleus
nTPM: 201.4
2322 Female, age 91, both hemispheres 251.5
2333 Male, age 80, both hemispheres 216.5
2452 Male, age 74, both hemispheres 206.7
2325 Male, age 76, both hemispheres 130.9
Spinal trigeminal nucleus, caudal
nTPM: 193.0
2312 Male, age 61, both hemispheres 253.7
2447 Male, age 76, both hemispheres 220.8
2308 Male, age 80, both hemispheres 198.9
2390 Female, age 91, both hemispheres 152.2
2642 Male, age 74, both hemispheres 139.2
Spinal trigeminal nucleus, interpolar
nTPM: 138.0
2389 Female, age 91, both hemispheres 168.9
2033 Male, age 80, both hemispheres 151.0
2066 Male, age 76, right hemisphere 148.6
2386 Female, age 85, both hemispheres 126.2
2625 Male, age 61, both hemispheres 95.1
Spinal trigeminal nucleus, oral
nTPM: 150.3
2164 Male, age 80, both hemispheres 208.8
1978 Male, age 76, both hemispheres 136.3
2737 Female, age 85, both hemispheres 105.9
Spinal vestibular nucleus
nTPM: 186.9
2748 Male, age 76, both hemispheres 228.0
2384 Male, age 74, both hemispheres 214.5
2806 Female, age 85, both hemispheres 186.4
2186 Female, age 91, both hemispheres 179.0
2780 Male, age 80, both hemispheres 161.7
2796 Male, age 61, both hemispheres 152.1
Subcoeruleus area
nTPM: 179.3
2369 Female, age 85, left hemisphere 271.2
2089 Male, age 76, left hemisphere 200.7
1958 Male, age 80, both hemispheres 180.8
2451 Male, age 74, both hemispheres 134.6
2323 Female, age 91, left hemisphere 109.2
Superior olive
nTPM: 197.7
2329 Male, age 80, right hemisphere 235.2
2561 Female, age 91, both hemispheres 219.4
2020 Male, age 76, both hemispheres 203.5
1875 Female, age 85, both hemispheres 167.1
2364 Male, age 74, right hemisphere 163.2
Superior vestibular nucleus
nTPM: 149.4
2015 Male, age 80, both hemispheres 186.6
2061 Male, age 76, both hemispheres 144.6
2383 Male, age 74, both hemispheres 117.1
Ventral medullary reticular nucleus
nTPM: 226.4
2372 Male, age 61, both hemispheres 251.3
2060 Male, age 76, both hemispheres 201.4
Ventral periolivary nuclei
nTPM: 180.3
2165 Male, age 80, both hemispheres 196.1
2023 Male, age 76, both hemispheres 185.3
2794 Female, age 91, left hemisphere 172.7
2130 Female, age 85, both hemispheres 167.2
Ventrolateral medulla, A1-C1 cell groups
nTPM: 202.6
2180 Male, age 61, both hemispheres 241.5
2118 Male, age 80, both hemispheres 234.7
1986 Male, age 76, both hemispheres 205.7
2302 Female, age 91, both hemispheres 171.0
2741 Female, age 85, both hemispheres 159.8
Ventrolateral tegmental area, A5 NE cell group
nTPM: 194.4
2456 Female, age 91, both hemispheres 224.7
2161 Male, age 80, both hemispheres 212.9
2840 Female, age 85, both hemispheres 210.3
1959 Male, age 76, both hemispheres 209.2
2449 Male, age 74, both hemispheres 164.1
2359 Male, age 61, both hemispheres 145.1

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 146.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 146.2
FF:10182-103D2 60 years, female 173.5
FF:10165-103B3 76 years, female 118.9
Medulla oblongata
Scaled Tags Per Million: 103.8
FF:10038-101F2 18-64 years, mixed 125.3
FF:10155-103A2 76 years, female 114.3
FF:10174-103C3 60 years, female 71.8
Pons
Scaled Tags Per Million: 124.7
FF:10033-101E6 18-54 years, mixed 124.7

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 38.5
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 38.5
Samples: 4

Max nTPM: 45.3
Min nTPM: 29.1
Sample A Female 45.3
Sample B Female 29.1
Sample C Male 36.8
Sample D Male 42.8
Pons
nTPM: 25.4
Samples: 4

Max nTPM: 39.5
Min nTPM: 16.5
Sample A Female 16.5
Sample B Female 22.7
Sample C Male 22.7
Sample D Male 39.5

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 25.9
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 25.9
Samples: 4

Max nTPM: 26.6
Min nTPM: 25.2
Sample A Male 26.6
Sample B Male 26.1
Sample C Female 25.8
Sample D Female 25.2

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 1.2
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 0.9
69782879 Antisense, RP_050505_03_H11, Mouse strain C57BL/6J (56 days, male) 0.9
Pons
Expression energy: 1.2
69782879 Antisense, RP_050505_03_H11, Mouse strain C57BL/6J (56 days, male) 1.2

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