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TISSUE PRIMARY DATA LIVER Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Liver
Tissue proteome
Liver
LIVER - Expression summary
Protein expression
Liveri

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Cholangiocytes: High
Hepatocytes: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:314.7 nTPM
HPA:299.0 nTPM
GTEx:314.7 nTPM
FANTOM5:150.7 Scaled Tags Per Million

LIVER - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA004727
Cholangiocytes High
Hepatocytes High



LIVER - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

299.0
N/A
Female, age 60
Liver sample 21
nTPM: 233.2
overview
Male, age 54
Liver sample 23
nTPM: 198.2
Cell types%
Hepatocytes:
80

Fibroblasts:
15

Other cell types:
5

overview
Male, age 74
Liver sample 24
nTPM: 262.4
Cell types%
Hepatocytes:
85

Fibroblasts:
5

Other cell types:
10

overview
Female, age 62
Liver sample 350
nTPM: 273
Cell types%
Hepatocytes:
70

Fibroblasts:
10

Other cell types:
20

overview
Male, age 78
Liver sample 351
nTPM: 308.9
Cell types%
Hepatocytes:
75

Fibroblasts:
5

Other cell types:
20

overview
Male, age 53
Liver sample 352
nTPM: 280.1
Cell types%
Hepatocytes:
80

Fibroblasts:
5

Other cell types:
15

overview
Male, age 77
Liver sample 353
nTPM: 310.3
Cell types%
Hepatocytes:
75

Fibroblasts:
5

Other cell types:
20

overview
Female, age 72
Liver sample 359
nTPM: 397.2
Cell types%
Hepatocytes:
50

Fibroblasts:
10

Other cell types:
40

overview
Male, age 70
Liver sample 367
nTPM: 327.9
Cell types%
Hepatocytes:
65

Fibroblasts:
10

Other cell types:
25

overview
Female, age 23
Liver sample 396
nTPM: 399
Cell types%
Hepatocytes:
70

Fibroblasts:
5

Other cell types:
25


LIVER - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

314.7
GTEx sample id Sample description nTPM
Liver
Average nTPM: 314.7
Samples: 226

Max nTPM: 650.0
Min nTPM: 42.1
Std nTPM: 119.7
Median nTPM: 315.0
GTEX-WVLH-2126-SM-EYYWD 50-59 years, male 650.0
GTEX-ZYT6-0626-SM-5E45V 30-39 years, male 631.3
GTEX-SJXC-1226-SM-4DM78 60-69 years, male 622.7
GTEX-145MF-0826-SM-5QGQA 50-59 years, male 573.3
GTEX-131XH-0626-SM-5LZWH 50-59 years, male 566.0
GTEX-1NV8Z-1626-SM-DPRYT 60-69 years, male 559.0
GTEX-18465-1626-SM-7LG6N 50-59 years, male 549.8
GTEX-X4EP-1026-SM-4QAS5 60-69 years, female 534.1
GTEX-14JG1-1626-SM-664NH 40-49 years, male 518.4
GTEX-11NUK-1226-SM-5P9GM 50-59 years, male 498.0
GTEX-X4EO-1126-SM-4QARQ 60-69 years, female 496.3
GTEX-1PIIG-1326-SM-EXOIR 30-39 years, male 496.0
GTEX-1C6VQ-1626-SM-79OO1 50-59 years, male 492.6
GTEX-QEG4-1826-SM-CKZN9 30-39 years, male 490.7
GTEX-RTLS-1326-SM-46MUN 60-69 years, female 489.8
GTEX-Y111-0726-SM-EYYVM 50-59 years, male 488.2
GTEX-1A8FM-1226-SM-7IGMD 50-59 years, female 487.9
GTEX-14753-1626-SM-5NQ9L 60-69 years, male 485.2
GTEX-1EKGG-1226-SM-7IGNO 60-69 years, male 475.2
GTEX-1HT8W-0826-SM-C1YRJ 30-39 years, male 470.3
GTEX-11DXY-0526-SM-5EGGQ 60-69 years, male 469.0
GTEX-WZTO-0626-SM-4PQYY 40-49 years, male 468.8
GTEX-11ZUS-2526-SM-59872 30-39 years, male 467.0
GTEX-REY6-1226-SM-48FDR 60-69 years, male 465.2
GTEX-13X6J-1826-SM-5TDCT 50-59 years, male 463.6
GTEX-13NYB-1026-SM-5IFH3 40-49 years, male 460.3
GTEX-13FTZ-0726-SM-5IFFY 60-69 years, male 460.1
GTEX-11ZTS-1426-SM-5EQMM 60-69 years, female 459.4
GTEX-1JJEA-1526-SM-CNNPK 60-69 years, male 457.8
GTEX-14DAQ-1726-SM-5S2R2 60-69 years, female 457.2
GTEX-1KANB-2226-SM-DHXJW 50-59 years, male 455.5
GTEX-13FLV-0326-SM-5N9DJ 50-59 years, male 455.1
GTEX-1KD4Q-1526-SM-D4P3L 40-49 years, male 455.0
GTEX-1EN7A-2026-SM-7MGY4 40-49 years, male 453.3
GTEX-1BAJH-1526-SM-7RHGI 70-79 years, male 448.4
GTEX-YECK-1926-SM-4W21H 60-69 years, male 445.6
GTEX-1212Z-0226-SM-59HLF 60-69 years, male 434.7
GTEX-WK11-1326-SM-4OOSI 50-59 years, male 434.0
GTEX-145LU-1326-SM-5LU9N 50-59 years, male 432.9
GTEX-1S82Y-1026-SM-EV7BJ 40-49 years, male 432.4
GTEX-1I1GR-1526-SM-CNNQE 60-69 years, male 430.3
GTEX-1RQEC-1126-SM-EAZ5E 60-69 years, male 429.3
GTEX-13OW6-2626-SM-5IFF2 50-59 years, male 425.5
GTEX-18A7A-1526-SM-72D69 50-59 years, female 424.7
GTEX-1J8EW-1626-SM-C1YQ8 60-69 years, female 422.5
GTEX-144GL-1426-SM-79OMA 50-59 years, male 419.9
GTEX-1GZ4I-1526-SM-9OSW9 50-59 years, male 417.3
GTEX-1A32A-0826-SM-72D5C 50-59 years, female 416.2
GTEX-RN64-1826-SM-48FDV 50-59 years, male 416.0
GTEX-11NV4-1326-SM-5HL6V 60-69 years, male 414.0
GTEX-15RJE-1126-SM-6LPI5 40-49 years, male 409.3
GTEX-RNOR-1426-SM-48FDJ 50-59 years, female 407.0
GTEX-17F96-1226-SM-79OK2 70-79 years, male 406.6
GTEX-RWSA-1426-SM-47JXA 40-49 years, male 406.2
GTEX-1F75A-1626-SM-9JGGT 50-59 years, male 405.6
GTEX-QESD-2026-SM-447BI 20-29 years, male 404.7
GTEX-1PBJJ-0626-SM-DPRYO 30-39 years, male 404.5
GTEX-1HCVE-1526-SM-B2LWW 50-59 years, male 401.6
GTEX-1CAMQ-1426-SM-7MKFL 40-49 years, male 399.4
GTEX-13SLX-1226-SM-5S2Q6 50-59 years, female 398.8
GTEX-1CB4F-1726-SM-7MGXH 60-69 years, male 395.4
GTEX-1IKJJ-1526-SM-C1YSC 60-69 years, male 395.3
GTEX-1GN2E-0926-SM-9WPOH 60-69 years, male 393.5
GTEX-1B933-1226-SM-731DW 50-59 years, female 392.2
GTEX-145MO-2326-SM-5NQ9K 60-69 years, male 390.4
GTEX-1EWIQ-0726-SM-7MKFW 70-79 years, female 388.7
GTEX-139TS-1426-SM-5IFJD 60-69 years, male 388.4
GTEX-1HBPI-1026-SM-AHZ4N 50-59 years, male 383.6
GTEX-13112-1426-SM-5EGH8 50-59 years, male 382.8
GTEX-QV44-0326-SM-C1YQX 50-59 years, male 381.9
GTEX-11ZVC-0726-SM-5FQT9 50-59 years, female 380.8
GTEX-14E7W-1526-SM-6871X 70-79 years, male 379.9
GTEX-13O3O-1826-SM-5IFGW 60-69 years, female 379.8
GTEX-17EVP-1026-SM-7IGOZ 40-49 years, male 378.7
GTEX-ZVT3-1626-SM-5GU66 60-69 years, female 377.4
GTEX-1I1HK-1126-SM-AHZ2L 60-69 years, male 375.7
GTEX-17HII-1026-SM-7IGLY 50-59 years, male 375.1
GTEX-13VXU-0926-SM-5IFFH 50-59 years, male 373.7
GTEX-131YS-1626-SM-5HL6C 60-69 years, female 371.7
GTEX-R53T-0326-SM-48FEC 50-59 years, female 371.7
GTEX-PX3G-0826-SM-48TZS 20-29 years, female 371.6
GTEX-1R9JW-0826-SM-DPRZJ 30-39 years, female 370.3
GTEX-15SHU-1826-SM-7KUKS 40-49 years, female 369.9
GTEX-147JS-1126-SM-5RQIW 60-69 years, male 367.7
GTEX-1B8L1-0726-SM-7P8RT 60-69 years, male 365.7
GTEX-1QP6S-1326-SM-DPRZ8 40-49 years, male 364.2
GTEX-132NY-0926-SM-5P9G3 60-69 years, male 362.3
GTEX-14E1K-0326-SM-5S2PE 50-59 years, male 361.1
GTEX-1AX9I-1626-SM-72D5D 60-69 years, male 350.8
GTEX-ZEX8-0826-SM-4WKHK 50-59 years, male 350.4
GTEX-12WSD-1426-SM-5GCN9 60-69 years, female 349.0
GTEX-139TU-0826-SM-5IJFG 60-69 years, male 348.5
GTEX-13113-1326-SM-5GCOI 60-69 years, female 347.2
GTEX-Y5V5-0926-SM-4VBPZ 60-69 years, female 346.8
GTEX-17HHE-0126-SM-79398 50-59 years, male 346.2
GTEX-1KWVE-0326-SM-EV7AF 30-39 years, male 344.8
GTEX-15DYW-1326-SM-6LPIV 60-69 years, female 342.0
GTEX-12WSI-0226-SM-5GCNA 50-59 years, male 338.6
GTEX-11OF3-0726-SM-5BC4Z 60-69 years, male 337.7
GTEX-14AS3-0126-SM-5Q5F4 40-49 years, female 336.2
GTEX-ZAB5-0426-SM-5CVMI 50-59 years, male 334.6
GTEX-T6MN-1226-SM-3NMA5 50-59 years, male 329.9
GTEX-14A5I-1726-SM-5QGQ5 50-59 years, female 328.2
GTEX-ZVT4-0626-SM-5E45T 50-59 years, female 327.1
GTEX-18A6Q-2026-SM-718AQ 60-69 years, male 326.7
GTEX-RU72-1426-SM-46MUF 50-59 years, female 326.7
GTEX-1399R-1226-SM-5P9GF 30-39 years, male 326.1
GTEX-OOBJ-0826-SM-3NB2K 60-69 years, male 326.1
GTEX-1HBPH-2626-SM-A96TV 40-49 years, female 322.6
GTEX-14BIL-1326-SM-79OMR 50-59 years, male 322.1
GTEX-1399T-0826-SM-5IFES 60-69 years, male 321.3
GTEX-1A8G7-1126-SM-731ED 60-69 years, male 317.9
GTEX-12KS4-1326-SM-5LUB3 30-39 years, male 316.7
GTEX-1GN73-1126-SM-9OSW5 60-69 years, male 313.3
GTEX-13QJC-0726-SM-5RQJK 60-69 years, female 312.7
GTEX-13NZB-0626-SM-5IFH6 30-39 years, male 309.3
GTEX-1E2YA-1226-SM-7MGY3 50-59 years, male 308.3
GTEX-1H11D-0826-SM-9OSWB 40-49 years, male 294.1
GTEX-OIZF-0826-SM-3MJGO 60-69 years, male 293.9
GTEX-1EH9U-1126-SM-7IGLU 60-69 years, male 293.1
GTEX-P78B-1326-SM-3P611 40-49 years, female 292.0
GTEX-147F4-1426-SM-5LUA8 50-59 years, male 291.8
GTEX-11DXZ-0126-SM-5EGGY 50-59 years, male 289.2
GTEX-1GF9V-1226-SM-7MKGY 60-69 years, male 288.7
GTEX-YFC4-1526-SM-5IFJS 40-49 years, female 285.1
GTEX-13PVQ-1526-SM-5IFEQ 50-59 years, male 284.7
GTEX-1JJ6O-0826-SM-CXZJL 60-69 years, male 282.7
GTEX-15SZO-1226-SM-6LPIP 50-59 years, male 278.4
GTEX-1KD5A-1226-SM-CXZK7 50-59 years, male 277.6
GTEX-15ER7-1826-SM-6LLI7 20-29 years, female 277.5
GTEX-1QP66-0226-SM-DPRXS 50-59 years, male 277.5
GTEX-147GR-1326-SM-7IGLB 60-69 years, male 276.8
GTEX-VUSG-0126-SM-4KL1X 50-59 years, male 276.5
GTEX-1ICLY-1526-SM-C1YS4 50-59 years, male 275.6
GTEX-ZF2S-3026-SM-4WWCH 50-59 years, female 274.7
GTEX-P44G-1126-SM-3NM9D 30-39 years, male 271.9
GTEX-ZZPU-0426-SM-5GZYH 50-59 years, female 270.6
GTEX-WQUQ-1926-SM-4OOSA 60-69 years, male 269.3
GTEX-1GF9W-0826-SM-7MKHI 60-69 years, male 268.2
GTEX-XBEC-1526-SM-4AT68 50-59 years, male 266.2
GTEX-17MF6-1126-SM-7DUFS 40-49 years, male 262.8
GTEX-11WQC-0726-SM-5EQMR 60-69 years, male 260.6
GTEX-1JMLX-1326-SM-CXZJO 50-59 years, male 257.6
GTEX-Q2AG-1126-SM-48U1P 40-49 years, female 257.3
GTEX-14PHX-0526-SM-664NW 50-59 years, male 256.9
GTEX-18A66-2026-SM-7189C 60-69 years, male 256.7
GTEX-139YR-0226-SM-5IFEM 50-59 years, male 256.5
GTEX-12WSM-0726-SM-5GCOW 60-69 years, male 255.2
GTEX-TKQ2-1726-SM-4DXUP 50-59 years, male 254.9
GTEX-11GSP-0626-SM-5986T 60-69 years, female 253.8
GTEX-12ZZZ-1326-SM-59HKW 60-69 years, male 253.0
GTEX-1HB9E-0626-SM-AHZ4K 50-59 years, male 252.6
GTEX-ZPU1-0826-SM-57WG2 40-49 years, male 252.4
GTEX-Y5LM-0426-SM-4VBRO 40-49 years, female 250.9
GTEX-13N2G-0926-SM-5IFGJ 60-69 years, male 249.8
GTEX-1GN1U-0926-SM-9WPPY 50-59 years, female 247.0
GTEX-X261-1726-SM-4PQYT 50-59 years, male 246.9
GTEX-UPK5-1426-SM-4JBHH 40-49 years, male 245.3
GTEX-WFON-1726-SM-4LVMQ 40-49 years, male 241.1
GTEX-1269C-0626-SM-5FQSS 60-69 years, female 240.0
GTEX-1QPFJ-1126-SM-E9U5V 30-39 years, female 239.1
GTEX-1LGRB-0626-SM-CNNQH 50-59 years, female 237.8
GTEX-ZAB4-0826-SM-5LU9D 40-49 years, male 237.3
GTEX-11EQ9-0526-SM-5A5JZ 30-39 years, male 236.9
GTEX-1ICG6-1026-SM-B2LY6 70-79 years, female 234.9
GTEX-Q734-0326-SM-48U15 40-49 years, female 231.7
GTEX-1IKK5-0326-SM-C1YPY 60-69 years, male 231.2
GTEX-ZVP2-0626-SM-51MSO 50-59 years, male 228.2
GTEX-1S5VW-1826-SM-EAZ53 60-69 years, male 227.7
GTEX-S33H-1626-SM-4AD68 30-39 years, male 225.5
GTEX-WY7C-0726-SM-4ONCB 50-59 years, male 225.4
GTEX-U3ZN-0226-SM-3DB8D 30-39 years, female 224.7
GTEX-WYVS-1926-SM-4PQZ2 40-49 years, female 218.5
GTEX-S4Z8-0526-SM-4AD4T 60-69 years, male 218.2
GTEX-13N11-0926-SM-5IJG2 50-59 years, female 215.0
GTEX-13FTW-1126-SM-5J2NV 40-49 years, male 212.6
GTEX-X3Y1-2726-SM-4PQZH 40-49 years, male 208.9
GTEX-1B932-1426-SM-793AN 40-49 years, female 207.3
GTEX-1KAFJ-0726-SM-CXZKF 50-59 years, male 205.7
GTEX-13NZ9-1326-SM-5MR3V 50-59 years, male 204.2
GTEX-ZYY3-0626-SM-5NQ6W 60-69 years, female 203.3
GTEX-QEL4-1226-SM-447A4 50-59 years, male 200.9
GTEX-RM2N-1926-SM-48FCU 50-59 years, male 200.9
GTEX-1497J-0726-SM-5Q5D1 60-69 years, male 200.1
GTEX-1LH75-0926-SM-EAZ5C 50-59 years, female 197.3
GTEX-1QCLZ-1226-SM-EAZ49 60-69 years, female 197.0
GTEX-17HGU-1826-SM-7IGQM 50-59 years, male 196.5
GTEX-1GF9X-0426-SM-7MKHN 40-49 years, female 193.2
GTEX-11TUW-1726-SM-5BC5C 60-69 years, male 190.7
GTEX-ZF29-2026-SM-DNZYW 60-69 years, female 189.7
GTEX-1AMFI-0826-SM-731DV 50-59 years, female 189.0
GTEX-YEC4-0826-SM-5P9FV 40-49 years, male 187.9
GTEX-15RJ7-2026-SM-6LPJ4 40-49 years, male 186.8
GTEX-ZTPG-1426-SM-51MT3 20-29 years, female 181.9
GTEX-12WSL-0226-SM-5CVMJ 50-59 years, male 180.9
GTEX-O5YV-0726-SM-EV798 60-69 years, female 177.0
GTEX-Z9EW-0426-SM-5CVM9 40-49 years, male 175.4
GTEX-1K9T9-0726-SM-CXZJZ 50-59 years, female 175.2
GTEX-14PJO-1726-SM-68719 60-69 years, male 174.0
GTEX-1AX8Z-1026-SM-7189R 60-69 years, male 170.6
GTEX-12696-0826-SM-5EGGE 60-69 years, male 170.2
GTEX-UTHO-2426-SM-4JBHD 60-69 years, male 168.8
GTEX-1B996-1426-SM-7EPIA 60-69 years, male 166.8
GTEX-YB5E-0326-SM-5IFHU 40-49 years, male 162.9
GTEX-U8XE-1526-SM-4E3HT 30-39 years, male 162.2
GTEX-1HCU7-1726-SM-B2LX9 50-59 years, male 160.7
GTEX-144GM-1326-SM-5LU5E 20-29 years, male 157.6
GTEX-1MJIX-0726-SM-DPRYP 40-49 years, male 152.3
GTEX-146FH-1526-SM-5NQBU 50-59 years, female 152.2
GTEX-13PVR-0126-SM-5S2PY 60-69 years, female 151.7
GTEX-X4XY-1626-SM-46MVN 60-69 years, male 149.2
GTEX-XXEK-1126-SM-4BRUX 50-59 years, male 139.4
GTEX-1B8SG-1326-SM-79ONT 50-59 years, male 135.7
GTEX-18D9B-1526-SM-7KFRK 60-69 years, male 124.3
GTEX-1CB4J-0726-SM-7IGN8 60-69 years, male 124.3
GTEX-S32W-1926-SM-4AD63 50-59 years, female 122.3
GTEX-148VI-0626-SM-5TDDH 60-69 years, female 114.1
GTEX-12WSG-0626-SM-5FQTQ 50-59 years, female 111.0
GTEX-13O1R-2026-SM-5KM3N 60-69 years, male 109.0
GTEX-14C38-1526-SM-5RQJ7 50-59 years, male 101.5
GTEX-QDVN-0826-SM-48TZ2 50-59 years, male 96.1
GTEX-131XE-0326-SM-5LZVO 50-59 years, male 89.9
GTEX-14XAO-0226-SM-68728 60-69 years, female 83.0
GTEX-132AR-0426-SM-5IFH8 50-59 years, female 80.3
GTEX-11TT1-1726-SM-5EQLJ 20-29 years, male 47.1
GTEX-O5YT-0826-SM-3TW8N 20-29 years, male 42.1
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LIVER - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

150.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Liver
Scaled Tags Per Million: 150.7
FF:10018-101C9 64,69,70 years, mixed 150.7

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