HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:45.5 nTPM
HPA Brain:34.7 nTPM
GTEx:45.5 nTPM
FANTOM5:211.5 Scaled Tags Per Million
Pig:71.1 nTPM
Mouse:46.9 nTPM
Allen mouse:4.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA024677Antibody CAB021353
Glial cells Not detectedNot detected
Neuronal cells MediumNot detected




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 34.7
Sample id Sample description nTPM
Hippocampus
nTPM: 34.7
2529 Female, age 94, left hemisphere 49.3
1911 Female, age 85, right hemisphere 37.7
1855 Male, age 76, left hemisphere 35.6
1898 Male, age 80, left hemisphere 32.9
2148 Female, age 91, left hemisphere 26.3
2621 Female, age 67, right hemisphere 26.2
Dentate gyrus
nTPM: 28.7
2528 Male, age 74, both hemispheres 42.1
2530 Female, age 94, left hemisphere 37.3
2531 Female, age 67, both hemispheres 28.7
2246 Female, age 85, both hemispheres 24.5
2010 Male, age 76, both hemispheres 19.9
1927 Female, age 91, both hemispheres 19.4
Entorhinal gyrus
nTPM: 22.8
2117 Female, age 91, right hemisphere 39.9
1787 Male, age 76, left hemisphere 28.3
2686 Male, age 75, right hemisphere 21.8
2764 Male, age 80, right hemisphere 19.9
1938 Female, age 85, left hemisphere 14.7
2613 Female, age 94, left hemisphere 12.1
Hippocampus, CA1
nTPM: 23.9
2527 Male, age 74, both hemispheres 34.2
1873 Female, age 85, both hemispheres 31.4
2082 Female, age 91, right hemisphere 29.6
2045 Male, age 76, both hemispheres 14.6
2749 Male, age 80, left hemisphere 9.8
Hippocampus, CA2
nTPM: 31.3
2249 Male, age 74, both hemispheres 40.6
1963 Male, age 80, left hemisphere 35.7
2113 Female, age 91, right hemisphere 35.3
2437 Female, age 94, left hemisphere 32.7
1940 Female, age 85, left hemisphere 31.9
1892 Male, age 76, both hemispheres 11.5
Hippocampus, CA3
nTPM: 26.4
2861 Female, age 67, both hemispheres 35.9
1891 Female, age 85, both hemispheres 35.3
2620 Female, age 94, left hemisphere 28.9
2436 Male, age 74, both hemispheres 28.1
1867 Male, age 76, both hemispheres 15.4
2137 Male, age 80, left hemisphere 14.6
Parahippocampal cortex
nTPM: 17.1
1990 Female, age 91, right hemisphere 22.8
2245 Female, age 91, both hemispheres 22.5
2692 Male, age 74, both hemispheres 20.9
2250 Female, age 67, right hemisphere 17.8
2622 Female, age 67, right hemisphere 17.1
2532 Female, age 72, left hemisphere 15.7
2018 Male, age 76, both hemispheres 15.2
1933 Female, age 85, both hemispheres 14.3
1850 Male, age 80, both hemispheres 13.4
2693 Female, age 94, both hemispheres 11.0
Perirhinal gyrus
nTPM: 15.3
2521 Female, age 94, right hemisphere 19.5
2848 Male, age 76, right hemisphere 17.2
1841 Female, age 85, right hemisphere 15.4
1794 Male, age 80, right hemisphere 13.0
1847 Female, age 91, left hemisphere 11.5
Subiculum
nTPM: 28.5
2729 Female, age 91, right hemisphere 36.5
2042 Male, age 76, both hemispheres 32.9
2619 Male, age 74, both hemispheres 31.5
1901 Male, age 80, both hemispheres 24.2
2438 Female, age 94, left hemisphere 23.5
1977 Female, age 85, both hemispheres 22.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 45.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 45.5
Samples: 197

Max nTPM: 158.3
Min nTPM: 10.0
Std nTPM: 25.2
Median nTPM: 40.5
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 158.3
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 132.2
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 131.8
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 114.3
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 113.5
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 111.8
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 111.6
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 104.0
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 102.3
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 98.7
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 89.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 211.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 211.5
FF:10153-102I9 76 years, female 295.4
FF:10169-103B7 60 years, female 127.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 71.1
Pig sample Sample description nTPM
Subiculum
nTPM: 64.2
Samples: 4

Max nTPM: 86.7
Min nTPM: 38.7
Sample A Female 73.6
Sample B Female 38.7
Sample C Male 57.9
Sample D Male 86.7
Dorsal hippocampus
nTPM: 51.3
Samples: 4

Max nTPM: 73.9
Min nTPM: 40.2
Sample A Female 50.4
Sample B Female 40.7
Sample C Male 73.9
Sample D Male 40.2
Entorhinal cortex
nTPM: 66.1
Samples: 4

Max nTPM: 86.5
Min nTPM: 35.6
Sample A Female 86.5
Sample B Female 65.2
Sample C Male 77.0
Sample D Male 35.6
Ventral hippocampus
nTPM: 71.1
Samples: 4

Max nTPM: 109.0
Min nTPM: 45.7
Sample A Female 79.8
Sample B Female 45.7
Sample C Male 109.0
Sample D Male 49.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 46.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 43.4
Samples: 4

Max nTPM: 47.6
Min nTPM: 38.0
Sample A Male 47.6
Sample B Male 42.8
Sample C Female 45.0
Sample D Female 38.0
Hippocampal formation
nTPM: 46.9
Samples: 4

Max nTPM: 49.6
Min nTPM: 44.4
Sample A Male 45.7
Sample B Male 44.4
Sample C Female 47.8
Sample D Female 49.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 4.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.0
81654091 Antisense, RP_080228_04_B09, Mouse strain C57BL/6J (56 days, male) 4.4
74724763 Antisense, RP_060220_04_B06, Mouse strain C57BL/6J (56 days, male) 3.5

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