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  • SLC2A1
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:33.6 nTPM
HPA Brain:53.3 nTPM
GTEx:33.6 nTPM
FANTOM5:125.7 Scaled Tags Per Million
Pig:99.6 nTPM
Mouse:68.8 nTPM
Allen mouse:2.3 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA031345Antibody HPA058494Antibody CAB002759
Glial cells Not detectedNot detectedNot detected
Neuronal cells Not detectedNot detectedLow





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

53.3
Sample id Sample description nTPM
Caudate nucleus
nTPM: 42.2
2481 Female, age 94, left hemisphere 49.9
2290 Female, age 72, unknown 48.7
2846 Female, age 79, unknown 47.5
1857 Female, age 85, left hemisphere 44.9
2288 Male, age 75, left hemisphere 42.5
1854 Male, age 80, left hemisphere 35.9
2289 Male, age 61, right hemisphere 34.5
1781 Male, age 74, unknown 34.0
Globus pallidus, externus
nTPM: 53.3
2646 Male, age 61, right hemisphere 64.1
2772 Female, age 79, unknown 61.2
1996 Male, age 80, right hemisphere 60.9
2567 Female, age 72, unknown 44.6
2395 Male, age 75, both hemispheres 35.7
Globus pallidus, internus
nTPM: 53.0
2287 Male, age 75, right hemisphere 61.4
1818 Male, age 74, unknown 59.6
2483 Female, age 94, right hemisphere 57.0
2037 Male, age 80, right hemisphere 56.6
2111 Female, age 85, right hemisphere 49.3
2778 Female, age 91, both hemispheres 45.4
2566 Female, age 72, unknown 41.3
Nucleus accumbens
nTPM: 33.8
2286 Male, age 75, left hemisphere 44.9
2698 Female, age 72, unknown 39.4
2391 Female, age 94, left hemisphere 38.6
1806 Female, age 85, left hemisphere 37.0
1783 Male, age 74, unknown 35.4
1856 Female, age 91, right hemisphere 27.5
2732 Male, age 80, right hemisphere 26.1
2824 Male, age 61, right hemisphere 21.2
Nucleus basalis of Meynert
nTPM: 47.1
2569 Male, age 61, both hemispheres 72.2
2484 Female, age 94, left hemisphere 52.0
2821 Male, age 75, both hemispheres 33.4
2393 Male, age 80, right hemisphere 30.8
Nucleus of the diagonal band
nTPM: 22.8
1979 Male, age 74, unknown 24.5
2195 Female, age 85, both hemispheres 24.4
1812 Female, age 91, both hemispheres 24.3
2029 Male, age 61, right hemisphere 22.3
2775 Male, age 80, right hemisphere 18.2
Putamen
nTPM: 36.7
2489 Female, age 72, unknown 48.6
2482 Female, age 94, left hemisphere 44.5
2466 Female, age 79, unknown 35.9
1838 Male, age 80, right hemisphere 34.8
1829 Male, age 74, unknown 33.8
1937 Female, age 91, right hemisphere 31.6
2647 Male, age 75, left hemisphere 27.5
Septal nuclei
nTPM: 27.8
2394 Male, age 61, left hemisphere 42.0
2031 Female, age 72, unknown 32.3
2199 Male, age 80, right hemisphere 28.0
2059 Female, age 85, both hemispheres 27.5
1960 Male, age 74, unknown 24.4
2629 Female, age 94, right hemisphere 20.6
2009 Female, age 91, both hemispheres 20.1
Stria terminalis, bed nucleus
nTPM: 23.1
2201 Male, age 74, unknown 29.8
1974 Female, age 91, both hemispheres 21.3
2486 Female, age 94, both hemispheres 18.2

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

33.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 28.9
Samples: 246

Max nTPM: 163.5
Min nTPM: 5.9
Std nTPM: 19.5
Median nTPM: 23.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 163.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 116.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 105.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 100.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 83.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 83.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 82.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 80.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 78.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 71.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 69.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 69.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 68.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 67.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 66.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 60.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 58.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 58.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 56.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 56.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 54.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 52.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 52.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 51.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 49.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 49.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 48.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 47.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 47.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 47.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 47.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 45.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 45.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 43.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 43.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 43.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 42.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 42.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 41.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 41.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 40.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 40.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 39.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 39.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 39.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 38.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 38.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 38.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 37.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 37.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 36.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 36.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 36.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 35.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 35.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 35.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 34.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 34.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 34.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 33.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 33.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 33.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 33.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 33.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 33.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 32.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 32.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 32.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 32.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 32.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 31.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 30.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 30.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 30.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 30.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 30.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 30.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 30.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 30.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 29.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 29.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 29.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 29.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 28.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 28.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 28.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 28.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 28.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 27.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 27.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 27.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 27.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 27.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 27.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 27.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 27.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 27.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 26.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 26.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 26.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 26.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 26.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 26.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 26.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 26.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 25.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 25.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 25.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 25.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 25.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 25.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 25.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 25.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 25.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 25.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 25.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 24.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 24.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 24.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 24.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 24.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 23.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 23.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 23.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 23.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 23.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 23.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 23.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 22.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 22.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 22.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 22.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 22.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 22.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 22.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 22.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 22.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 22.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 22.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 22.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 22.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 22.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 22.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 21.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 21.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 21.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 21.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 21.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 21.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 21.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 21.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 20.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 20.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 20.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 20.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 20.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 20.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 20.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 20.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 19.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 19.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 19.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 19.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 19.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 19.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 19.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 19.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 19.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 19.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 19.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 19.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 19.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 18.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 18.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 18.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 18.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 18.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 18.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 18.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 18.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 18.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 18.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 17.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 17.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 17.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 17.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 17.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 16.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 16.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 16.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 16.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 16.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 16.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 16.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 16.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 15.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 15.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 15.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 15.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 15.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 15.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 15.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 14.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 14.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 14.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 14.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 14.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 14.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 13.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 13.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 13.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 13.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 13.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 13.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 13.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 13.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 13.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 13.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 12.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 12.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 12.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 12.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 12.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 11.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 11.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 11.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 11.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 11.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 10.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 10.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 10.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 10.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 10.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 10.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 10.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 9.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 8.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 8.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 8.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 7.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 7.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 7.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 7.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 6.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 6.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 5.9
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 22.0
Samples: 246

Max nTPM: 206.5
Min nTPM: 5.6
Std nTPM: 22.3
Median nTPM: 16.4
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 206.5
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 168.8
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 154.6
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 106.3
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 87.1
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 80.4
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 76.2
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 67.7
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 64.3
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 61.9
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 56.6
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 53.1
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 52.5
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 49.6
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 48.4
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 47.6
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 45.8
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 44.3
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 44.0
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 43.5
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 42.5
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 41.5
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 37.6
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 37.4
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 36.3
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 36.0
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 35.4
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 35.2
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 35.0
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 34.5
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 34.5
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 33.9
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 33.9
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 33.5
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 33.0
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 32.4
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 32.0
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 31.3
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 30.9
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 30.3
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 29.8
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 29.6
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 29.3
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 28.6
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 27.9
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 27.7
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 27.2
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 27.1
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 26.9
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 26.8
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 26.0
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 25.9
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 25.6
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 25.5
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 25.1
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 24.7
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 24.6
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 24.4
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 24.4
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 24.3
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 23.6
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 23.2
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 23.1
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 22.7
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 22.7
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 22.5
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 22.1
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 22.1
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 21.3
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 21.2
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 21.2
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 20.8
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 20.8
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 20.6
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 20.6
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 20.6
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 20.4
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 20.3
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 20.2
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 20.1
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 19.9
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 19.9
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 19.9
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 19.8
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 19.7
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 19.7
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 19.5
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 19.5
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 19.5
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 19.4
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 19.3
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 19.3
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 19.2
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 19.1
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 19.1
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 19.1
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 18.7
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 18.6
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 18.5
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 18.4
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 18.1
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 18.0
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 18.0
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 17.9
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 17.9
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 17.7
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 17.6
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 17.6
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 17.6
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 17.6
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 17.5
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 17.3
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 17.3
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 17.2
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 17.2
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 17.2
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 17.0
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 16.9
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 16.8
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 16.5
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 16.5
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 16.4
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 16.4
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 16.3
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 16.3
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 16.3
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 16.2
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 16.0
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 16.0
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 15.7
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 15.6
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 15.4
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 15.3
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 15.3
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 15.3
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 15.2
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 15.0
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 15.0
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 14.9
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 14.9
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 14.8
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 14.7
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 14.6
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 14.5
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 14.3
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 14.3
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 14.2
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 14.2
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 14.1
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 14.0
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 13.9
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 13.8
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 13.7
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 13.7
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 13.7
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 13.6
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 13.5
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 13.5
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 13.5
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 13.5
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 13.5
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 13.5
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 13.3
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 13.1
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 13.0
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 12.8
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 12.8
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 12.7
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 12.7
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 12.5
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 12.5
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 12.4
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 12.2
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 12.0
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 11.9
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 11.9
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 11.9
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 11.8
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 11.8
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 11.8
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 11.8
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 11.6
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 11.6
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 11.6
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 11.6
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 11.6
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 11.5
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 11.4
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 11.3
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 11.2
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 11.1
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 11.1
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 10.9
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 10.8
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 10.8
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 10.8
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 10.6
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 10.5
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 10.5
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 10.4
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 10.3
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 10.2
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 10.1
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 10.1
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 10.1
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 9.8
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 9.7
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 9.5
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 9.5
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 9.4
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 9.3
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 9.3
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 9.3
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 9.1
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 9.0
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 9.0
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 8.9
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 8.8
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 8.8
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 8.7
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 8.7
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 8.7
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 8.5
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 8.5
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 8.3
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 8.2
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 8.1
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 8.1
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 8.0
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 8.0
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 7.9
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 7.9
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 7.9
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 7.8
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 7.8
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 7.7
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 7.7
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 7.6
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 7.2
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 7.1
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 6.9
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 6.6
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 6.5
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 6.1
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 6.0
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 5.6
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Brain - Putamen (basal ganglia)
Average nTPM: 33.6
Samples: 205

Max nTPM: 193.2
Min nTPM: 8.0
Std nTPM: 25.5
Median nTPM: 25.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 193.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 146.3
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 138.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 121.9
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 113.8
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 103.7
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 103.1
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 94.4
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 88.1
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 88.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 83.9
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 80.2
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 73.8
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 73.3
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 73.0
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 72.2
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 69.7
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 67.6
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 65.4
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 63.6
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 60.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 60.5
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 59.8
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 59.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 58.0
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 57.7
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 56.3
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 54.0
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 52.1
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 48.8
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 48.5
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 47.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 46.7
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 46.5
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 46.4
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 45.8
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 45.7
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 45.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 44.3
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 43.6
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 43.4
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 43.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 42.9
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 42.6
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 42.2
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 41.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 40.4
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 40.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 40.0
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 39.2
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 38.9
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 38.6
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 38.5
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 38.3
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 37.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 37.6
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 37.6
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 37.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 37.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 37.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 37.0
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 36.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 36.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 36.4
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 35.9
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 35.8
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 35.7
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 35.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 34.5
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 34.5
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 34.1
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 33.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 33.7
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 33.7
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 33.4
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 32.0
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 31.9
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 31.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 31.4
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 31.3
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 30.9
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 30.5
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 30.4
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 30.2
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 30.0
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 29.9
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 29.1
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 28.7
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 28.4
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 28.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 27.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 27.9
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 27.8
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 27.7
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 27.6
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 26.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 26.9
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 26.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 26.5
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 26.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 25.5
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 25.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 25.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 25.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 25.1
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 25.0
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 25.0
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 24.9
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 24.9
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 24.8
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 24.7
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 24.7
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 24.7
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 24.6
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 24.6
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 24.1
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 24.0
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 23.8
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 23.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 23.7
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 23.5
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 23.5
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 23.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 23.0
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 22.5
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 22.5
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 22.5
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 22.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 22.3
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 22.2
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 22.0
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 22.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 21.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 21.5
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 21.4
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 21.1
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 20.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 20.8
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 20.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 20.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 20.4
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 20.4
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 20.4
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 20.1
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 20.0
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 20.0
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 20.0
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 19.7
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 19.6
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 19.6
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 19.5
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 19.2
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 19.0
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 18.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 18.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 18.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 18.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 18.0
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 17.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 17.6
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 17.6
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 17.1
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 16.7
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 16.6
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 16.6
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 16.5
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 16.2
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 16.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 15.6
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 14.5
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 14.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 14.4
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 14.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 13.9
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 13.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 13.8
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 13.8
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 13.8
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 13.5
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 13.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 13.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 13.5
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 13.2
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 13.2
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 13.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 12.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 12.7
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 12.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 12.2
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 12.0
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 11.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 11.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 11.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 11.3
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 10.8
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 10.8
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 10.8
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 10.7
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 10.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 10.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 9.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 9.3
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 8.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 8.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 8.0
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

125.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 106.2
FF:10164-103B2 76 years, female 106.2
Nucleus accumbens
Scaled Tags Per Million: 124.0
FF:10037-101F1 23-56 years, mixed 124.0
Putamen
Scaled Tags Per Million: 72.7
FF:10176-103C5 60 years, female 72.7
Globus pallidus
Scaled Tags Per Million: 125.7
FF:10161-103A8 76 years, female 163.6
FF:10175-103C4 60 years, female 87.8

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

99.6
Pig sample Sample description nTPM
Caudate
nTPM: 84.0
Samples: 4

Max nTPM: 103.0
Min nTPM: 62.4
Sample A Female 62.4
Sample B Female 84.7
Sample C Male 103.0
Sample D Male 85.7
Putamen
nTPM: 99.6
Samples: 4

Max nTPM: 119.8
Min nTPM: 79.8
Sample A Female 92.7
Sample B Female 79.8
Sample C Male 119.8
Sample D Male 106.0
Septum
nTPM: 76.8
Samples: 4

Max nTPM: 99.8
Min nTPM: 65.8
Sample A Female 69.3
Sample B Female 72.1
Sample C Male 99.8
Sample D Male 65.8
Ventral pallidum
nTPM: 86.7
Samples: 4

Max nTPM: 118.5
Min nTPM: 65.7
Sample A Female 65.7
Sample B Female 84.9
Sample C Male 118.5
Sample D Male 77.6

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

68.8
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 68.8
Samples: 4

Max nTPM: 80.7
Min nTPM: 52.4
Sample A Male 52.4
Sample B Male 64.7
Sample C Female 77.3
Sample D Female 80.7
Septum
nTPM: 62.3
Samples: 4

Max nTPM: 78.6
Min nTPM: 47.3
Sample A Male 47.3
Sample B Male 56.5
Sample C Female 78.6
Sample D Female 66.9
Ventral forebrain
nTPM: 63.0
Samples: 4

Max nTPM: 85.1
Min nTPM: 49.9
Sample A Male 51.5
Sample B Male 49.9
Sample C Female 85.1
Sample D Female 65.3

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

2.3
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 2.3
69873875 Antisense, RP_050512_02_B12, Mouse strain C57BL/6J (56 days, male) 3.2
74882936 Antisense, RP_060315_04_H08, Mouse strain C57BL/6J (56 days, male) 1.4
Pallidum
Expression energy: 2.2
69873875 Antisense, RP_050512_02_B12, Mouse strain C57BL/6J (56 days, male) 3.1
74882936 Antisense, RP_060315_04_H08, Mouse strain C57BL/6J (56 days, male) 1.3

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