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ARTN
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PROTEIN SUMMARY GENE INFORMATION RNA DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

ARTN
Synonyms ENOVIN, EVN, NBN
Gene descriptioni

Full gene name according to HGNC.

Artemin
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Secreted, Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 1
Cytoband p34.1
Chromosome location (bp) 43933320 - 43937240
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

11
Ensembl ENSG00000117407 (version 109)
Entrez gene 9048
HGNC HGNC:727
UniProt Q5T4W7 (UniProt - Evidence at protein level)
neXtProt NX_Q5T4W7
GeneCards ARTN
Antibodypedia ARTN antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Growth factor that supports the survival of sensory and sympathetic peripheral neurons in culture and also supports the survival of dopaminergic neurons of the ventral mid-brain 1, 2. Acts by binding to its coreceptor, GFRA3, leading to autophosphorylation and activation of the RET receptor 3. Strong attractant of gut hematopoietic cells thus promoting the formation Peyer's patch-like structures, a major component of the gut-associated lymphoid tissue (By similarity).... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Growth factor
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes a secreted ligand of the glial cell line-derived neurotrophic factor (GDNF) subfamily and TGF-beta (transforming growth factor-beta) superfamily of proteins. Ligands of this family bind various TGF-beta receptors leading to recruitment and activation of SMAD family transcription factors that regulate gene expression. The encoded preproprotein is proteolytically processed to generate each subunit of the disulfide-linked homodimer. This protein signals through the RET receptor and GFR alpha 3 coreceptor, and supports the survival of a number of peripheral neuron populations and at least one population of dopaminergic CNS neurons. This protein has also been shown to promote tumor growth, metastasis, and drug resistance in mammary carcinoma. [provided by RefSeq, Aug 2016]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
ARTN-201
ENSP00000361429
ENST00000372354
Q5T4W7
[Direct mapping] Artemin
Show all
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0005102 [signaling receptor binding]
GO:0005515 [protein binding]
GO:0005576 [extracellular region]
GO:0005615 [extracellular space]
GO:0007165 [signal transduction]
GO:0007405 [neuroblast proliferation]
GO:0007422 [peripheral nervous system development]
GO:0008083 [growth factor activity]
GO:0030116 [glial cell-derived neurotrophic factor receptor binding]
GO:0030971 [receptor tyrosine kinase binding]
GO:0048731 [system development]
Show all
220 aa
22.9 kDa
Yes 0
ARTN-202
ENSP00000361434
ENST00000372359
Q5T4W7
[Direct mapping] Artemin
Show all
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0005102 [signaling receptor binding]
GO:0005515 [protein binding]
GO:0005576 [extracellular region]
GO:0005615 [extracellular space]
GO:0007165 [signal transduction]
GO:0007405 [neuroblast proliferation]
GO:0007411 [axon guidance]
GO:0007422 [peripheral nervous system development]
GO:0008083 [growth factor activity]
GO:0030116 [glial cell-derived neurotrophic factor receptor binding]
GO:0030971 [receptor tyrosine kinase binding]
GO:0048731 [system development]
GO:0050930 [induction of positive chemotaxis]
GO:0061146 [Peyer's patch morphogenesis]
GO:0097021 [lymphocyte migration into lymphoid organs]
Show all
220 aa
22.9 kDa
Yes 0
ARTN-203
ENSP00000387435
ENST00000414809
Q5T4W7
[Direct mapping] Artemin
Show all
   Phobius predicted membrane proteins
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0005102 [signaling receptor binding]
GO:0005515 [protein binding]
GO:0005576 [extracellular region]
GO:0005615 [extracellular space]
GO:0007165 [signal transduction]
GO:0007405 [neuroblast proliferation]
GO:0007422 [peripheral nervous system development]
GO:0008083 [growth factor activity]
GO:0030116 [glial cell-derived neurotrophic factor receptor binding]
GO:0030971 [receptor tyrosine kinase binding]
GO:0048731 [system development]
Show all
228 aa
23.6 kDa
Yes 0
ARTN-204
ENSP00000391998
ENST00000438616
Q5T4W7
[Direct mapping] Artemin
Show all
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0005102 [signaling receptor binding]
GO:0005515 [protein binding]
GO:0005576 [extracellular region]
GO:0005615 [extracellular space]
GO:0007165 [signal transduction]
GO:0007405 [neuroblast proliferation]
GO:0007422 [peripheral nervous system development]
GO:0008083 [growth factor activity]
GO:0030116 [glial cell-derived neurotrophic factor receptor binding]
GO:0030971 [receptor tyrosine kinase binding]
GO:0048731 [system development]
Show all
237 aa
24.5 kDa
No 0
ARTN-205
ENSP00000435804
ENST00000471394
E9PIK2
[Direct mapping] Artemin
Show all
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
Show all
GO:0005576 [extracellular region]
GO:0030116 [glial cell-derived neurotrophic factor receptor binding]
GO:0030971 [receptor tyrosine kinase binding]
Show all
66 aa
6.7 kDa
Yes 0
ARTN-206
ENSP00000435140
ENST00000472435
E9PLG3
[Direct mapping] Artemin
Show all
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
Show all
76 aa
7.6 kDa
Yes 0
ARTN-207
ENSP00000434856
ENST00000474592
E9PN22
[Direct mapping] Artemin
Show all
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
Show all
GO:0005576 [extracellular region]
GO:0030116 [glial cell-derived neurotrophic factor receptor binding]
GO:0030971 [receptor tyrosine kinase binding]
Show all
89 aa
9.1 kDa
Yes 0
ARTN-208
ENSP00000434784
ENST00000477048
E9PIK2
[Direct mapping] Artemin
Show all
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
Show all
GO:0005576 [extracellular region]
GO:0030116 [glial cell-derived neurotrophic factor receptor binding]
GO:0030971 [receptor tyrosine kinase binding]
Show all
66 aa
6.7 kDa
Yes 0
ARTN-209
ENSP00000434071
ENST00000479128
E9PLG3
[Direct mapping] Artemin
Show all
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
Show all
76 aa
7.6 kDa
Yes 0
ARTN-210
ENSP00000436149
ENST00000491846
E9PN22
[Direct mapping] Artemin
Show all
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
Show all
GO:0005576 [extracellular region]
GO:0030116 [glial cell-derived neurotrophic factor receptor binding]
GO:0030971 [receptor tyrosine kinase binding]
Show all
89 aa
9.1 kDa
Yes 0
ARTN-211
ENSP00000436727
ENST00000498139
Q5T4W7
[Direct mapping] Artemin
Show all
   Phobius predicted membrane proteins
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0005102 [signaling receptor binding]
GO:0005515 [protein binding]
GO:0005576 [extracellular region]
GO:0005615 [extracellular space]
GO:0007165 [signal transduction]
GO:0007405 [neuroblast proliferation]
GO:0007422 [peripheral nervous system development]
GO:0008083 [growth factor activity]
GO:0030116 [glial cell-derived neurotrophic factor receptor binding]
GO:0030971 [receptor tyrosine kinase binding]
GO:0048731 [system development]
Show all
228 aa
23.6 kDa
Yes 0

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