Expression of PRDX1 in stomach cancer - The Human Protein Atlas

STOMACH ADENOCARCINOMA (TCGA) - Interactive survival scatter plotⁱ

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisⁱ

PRDX1 is not prognostic in Stomach Adenocarcinoma (TCGA)

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 451.18

Median expressionⁱ : N/A

Median follow up timeⁱ : N/A

P scoreⁱ N/A

5-year survival highⁱ N/A

5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average pTPM

552.1

Number of samples

346

Samples

Sample	Description	pTPM
TCGA-VQ-A8E0-01A	68 years, male, black or african american, stage:Stage IIIA, dead, 562 days	2015.7
TCGA-IN-A6RI-01A	45 years, male, white, stage:Stage I, alive, 559 days	1716.6
TCGA-BR-4191-01A	72 years, male, white, stage:'--, dead, 558 days	1457.5
TCGA-BR-8295-01A	60 years, female, white, stage:Stage IIB, dead, 67 days	1314.2
TCGA-CG-4475-01A	76 years, male, stage:Stage IIB, alive, 699 days	1274.9
TCGA-B7-5818-01A	62 years, male, white, stage:Stage IB, alive, 356 days	1233.2
TCGA-B7-A5TI-01A	52 years, male, white, stage:Stage IIIC, alive, 595 days	1206.4
TCGA-VQ-A8P2-01A	68 years, male, white, stage:Stage IIIA, alive, 1160 days	1191.7
TCGA-HU-8602-01A	58 years, female, asian, stage:Stage IIB, alive, 679 days	1141.4
TCGA-VQ-A8PU-01A	72 years, female, white, stage:Stage IIIA, dead, 832 days	1108.3
TCGA-CG-5732-01A	66 years, male, stage:Stage IV, dead, 2100 days	1066.9
TCGA-VQ-A8PK-01A	58 years, male, white, stage:Stage IIIB, dead, 543 days	1038.9
TCGA-R5-A7ZR-01A	70 years, female, black or african american, stage:Stage III, dead, 185 days	1026.0
TCGA-CG-4440-01A	68 years, female, stage:Stage IV, dead, 122 days	1020.1
TCGA-RD-A7C1-01A	82 years, male, white, stage:Stage IB, dead, 507 days	994.5
TCGA-KB-A6F7-01A	54 years, female, stage:Stage IB, alive, 1935 days	982.9
TCGA-CD-8524-01A	61 years, female, asian, stage:Stage II, alive, 388 days	980.0
TCGA-VQ-A91V-01A	58 years, male, stage:Stage IIIA, alive, 1297 days	965.3
TCGA-D7-A6EV-01A	71 years, female, white, stage:Stage IIB, alive, 342 days	964.8
TCGA-D7-8576-01A	54 years, female, white, stage:Stage IIIB, dead, 446 days	960.9
TCGA-BR-7716-01A	62 years, female, white, stage:Stage IIB, alive, 1210 days	950.8
TCGA-IN-A6RR-01A	84 years, male, white, stage:'--, dead, 205 days	949.8
TCGA-BR-8589-01A	56 years, male, white, stage:Stage IIIB, alive, 825 days	948.5
TCGA-HF-7133-01A	female, stage:Stage IV, alive, 1918 days	944.1
TCGA-VQ-AA6F-01A	57 years, male, white, stage:Stage IIB, alive, 1646 days	902.0
TCGA-HU-A4GH-01A	75 years, male, asian, stage:Stage IA, alive, 358 days	900.9
TCGA-VQ-AA6A-01A	56 years, male, white, stage:Stage IIIC, alive, 1184 days	899.1
TCGA-VQ-AA64-01A	68 years, male, white, stage:Stage IIIB, dead, 560 days	888.2
TCGA-HU-A4H0-01A	72 years, male, asian, stage:Stage IIIC, alive, 64 days	883.2
TCGA-KB-A93J-01A	78 years, male, white, stage:Stage II, alive, 1124 days	882.7
TCGA-CG-4305-01A	69 years, male, stage:Stage II, alive, 485 days	880.8
TCGA-BR-7707-01A	69 years, female, white, stage:Stage IB, alive, 1090 days	874.9
TCGA-BR-8058-01A	53 years, female, white, stage:Stage IIIB, alive, 1133 days	863.7
TCGA-D7-6520-01A	53 years, male, white, stage:Stage IIIA, alive, 573 days	860.8
TCGA-D7-A6EZ-01A	66 years, male, white, stage:Stage IIIA, dead, 618 days	856.9
TCGA-HU-A4G8-01A	71 years, female, asian, stage:Stage IIB, alive, 690 days	849.1
TCGA-IN-A6RL-01A	84 years, male, white, stage:'--, dead, 406 days	848.0
TCGA-CD-8531-01A	66 years, female, asian, stage:Stage IIIA, alive, 383 days	831.4
TCGA-VQ-A8DZ-01A	70 years, male, black or african american, stage:Stage IV, dead, 396 days	822.3
TCGA-D7-A6F0-01A	79 years, female, white, stage:Stage IB, alive, 678 days	815.9
TCGA-CG-5723-01A	83 years, male, stage:Stage II, alive, 2496 days	811.7
TCGA-BR-8286-01A	49 years, male, white, stage:Stage II, alive, 895 days	809.5
TCGA-CG-4436-01A	57 years, male, stage:Stage IB, alive, 243 days	806.8
TCGA-FP-7829-01A	69 years, male, white, stage:Stage IIB, alive, 594 days	806.6
TCGA-BR-6452-01A	78 years, female, white, stage:Stage IIA, alive, 1055 days	805.0
TCGA-BR-8289-01A	57 years, male, white, stage:Stage IV, dead, 81 days	799.3
TCGA-CD-5800-01A	51 years, female, asian, stage:Stage II, alive, 400 days	796.4
TCGA-HU-8608-01A	70 years, male, asian, stage:Stage IIIB, alive, 641 days	772.4
TCGA-VQ-A8PE-01A	78 years, male, white, stage:Stage IIIB, dead, 675 days	769.8
TCGA-CG-4465-01A	69 years, female, stage:Stage IV, dead, 274 days	766.6
TCGA-BR-4257-01A	79 years, female, white, stage:'--, dead, 294 days	763.6
TCGA-CD-A48C-01A	79 years, female, asian, stage:Stage IIB, dead, 353 days	760.7
TCGA-BR-4267-01A	51 years, male, white, stage:Stage IB, dead, 188 days	750.3
TCGA-FP-8631-01A	68 years, male, white, stage:Stage IIIA, alive, 17 days	741.0
TCGA-CD-8527-01A	72 years, female, asian, stage:Stage II, dead, 218 days	740.5
TCGA-HU-A4H3-01A	56 years, female, asian, stage:Stage IIIC, alive, 882 days	739.6
TCGA-CG-4443-01A	68 years, male, stage:Stage IA, alive, 912 days	726.1
TCGA-VQ-A91Y-01A	67 years, male, white, stage:Stage IIIC, dead, 296 days	720.3
TCGA-HU-A4GP-01A	62 years, female, asian, stage:Stage IIA, alive, 273 days	719.9
TCGA-HU-A4GF-01A	69 years, male, asian, stage:Stage IIA, alive, 785 days	719.4
TCGA-BR-8382-01A	67 years, female, white, stage:Stage IIIC, dead, 762 days	718.8
TCGA-CD-8528-01A	43 years, female, asian, stage:Stage IIIA, alive, 375 days	717.8
TCGA-HU-A4GC-01A	74 years, male, asian, stage:Stage IIIB, alive, 99 days	716.8
TCGA-CG-4306-01A	90 years, male, stage:Stage IV, dead, 1 days	713.2
TCGA-HU-A4GU-01A	73 years, male, asian, stage:Stage IIB, alive, 200 days	713.0
TCGA-VQ-A8DT-01A	43 years, male, stage:Stage IIIB, alive, 1484 days	709.5
TCGA-EQ-8122-01A	71 years, female, white, stage:Stage IIB, dead, 243 days	706.4
TCGA-CD-5799-01A	45 years, male, asian, stage:Stage II, alive, 396 days	703.0
TCGA-D7-A4YX-01A	63 years, male, white, stage:Stage IIB, alive, 1108 days	698.5
TCGA-BR-8296-01A	58 years, female, white, stage:Stage IIIC, dead, 474 days	683.6
TCGA-VQ-A94T-01A	73 years, male, stage:Stage IIIB, dead, 342 days	674.8
TCGA-D7-5577-01A	53 years, female, white, stage:Stage IIIA, dead, 782 days	673.1
TCGA-HJ-7597-01A	71 years, female, white, stage:Stage IB, dead, 805 days	670.4
TCGA-FP-7735-01A	77 years, male, black or african american, stage:Stage IB, dead, 106 days	667.4
TCGA-CG-4466-01A	81 years, female, stage:Stage IB, alive, 577 days	665.3
TCGA-HU-A4GT-01A	71 years, female, asian, stage:Stage IIA, alive, 198 days	664.5
TCGA-VQ-A91N-01A	59 years, female, stage:Stage IV, dead, 570 days	664.3
TCGA-VQ-A925-01A	66 years, male, white, stage:Stage IIIA, dead, 138 days	657.8
TCGA-BR-8678-01A	76 years, male, white, stage:Stage IB, alive, 754 days	655.5
TCGA-BR-8059-01A	72 years, male, white, stage:Stage III, dead, 439 days	655.2
TCGA-BR-8368-01A	84 years, female, white, stage:Stage IB, alive, 131 days	649.7
TCGA-BR-7704-01A	69 years, female, white, stage:Stage II, alive, 1072 days	649.6
TCGA-IN-A7NU-01A	69 years, male, white, stage:Stage IIIB, alive, 356 days	649.4
TCGA-CD-8525-01A	82 years, female, asian, stage:Stage IIIA, alive, 383 days	646.6
TCGA-VQ-A8P5-01A	67 years, male, white, stage:Stage IIA, dead, 235 days	641.7
TCGA-CG-4438-01A	56 years, male, stage:Stage IV, alive, 1645 days	641.2
TCGA-VQ-AA68-01A	52 years, female, white, stage:Stage IIIC, alive, 1328 days	640.1
TCGA-BR-7958-01A	60 years, male, white, stage:Stage IIIB, alive, 899 days	636.3
TCGA-D7-A6EY-01A	72 years, female, white, stage:Stage IIIB, dead, 348 days	635.8
TCGA-BR-4256-01A	80 years, male, white, stage:'--, dead, 284 days	632.6
TCGA-RD-A8N1-01A	70 years, male, white, stage:Stage IIIB, alive, 3519 days	632.5
TCGA-BR-7957-01A	50 years, female, white, stage:Stage IV, dead, 276 days	632.4
TCGA-VQ-A91X-01A	74 years, male, white, stage:Stage IIIB, dead, 289 days	631.1
TCGA-3M-AB46-01A	70 years, male, white, stage:Stage IB, alive, 1765 days	628.2
TCGA-D7-6815-01A	70 years, female, white, stage:Stage IIB, alive, 486 days	626.4
TCGA-B7-A5TN-01A	60 years, male, white, stage:Stage IIB, alive, 287 days	624.2
TCGA-VQ-A8PM-01A	56 years, male, white, stage:Stage IV, dead, 57 days	622.7
TCGA-BR-8676-01A	59 years, male, white, stage:Stage IIIB, alive, 229 days	619.6
TCGA-RD-A8MW-01A	72 years, male, white, stage:Stage IIIB, dead, 1153 days	618.3
TCGA-BR-8297-01A	58 years, male, white, stage:Stage IIIC, alive, 225 days	618.2
TCGA-BR-8372-01A	63 years, male, white, stage:Stage IIIC, alive, 951 days	618.2
TCGA-BR-8591-01A	79 years, male, white, stage:Stage IIIC, alive, 856 days	618.1
TCGA-D7-8570-01A	44 years, male, white, stage:Stage IIIB, alive, 752 days	616.6
TCGA-VQ-A94R-01A	63 years, male, white, stage:'--, dead, 1294 days	613.1
TCGA-BR-8484-01A	61 years, male, white, stage:Stage IIIA, dead, 766 days	612.7
TCGA-MX-A5UJ-01A	86 years, female, white, stage:Stage IIIA, alive, 600 days	612.6
TCGA-VQ-A91K-01A	69 years, male, white, stage:Stage IIIA, alive, 1862 days	610.2
TCGA-FP-A8CX-01A	60 years, male, white, stage:Stage IIIC, alive, 7 days	608.1
TCGA-BR-8284-01A	72 years, female, white, stage:Stage IIIC, dead, 245 days	605.7
TCGA-VQ-A91E-01A	67 years, female, white, stage:Stage IIIB, alive, 664 days	599.5
TCGA-VQ-A8PJ-01A	53 years, male, stage:Stage IV, dead, 82 days	599.3
TCGA-CG-4477-01A	58 years, female, stage:Stage IB, alive, 942 days	598.2
TCGA-BR-6802-01A	65 years, male, white, stage:Stage IIIA, alive, 940 days	596.4
TCGA-BR-4201-01A	66 years, female, white, stage:'--, dead, 940 days	596.3
TCGA-CD-8526-01A	73 years, female, asian, stage:Stage IIIA, alive, 381 days	593.0
TCGA-BR-8690-01A	54 years, female, white, stage:Stage IIIB, alive, 325 days	587.5
TCGA-VQ-A8PX-01A	51 years, male, stage:Stage IA, alive, 1964 days	587.0
TCGA-D7-6525-01A	58 years, male, white, stage:Stage IIIA, dead, 406 days	586.4
TCGA-BR-8367-01A	55 years, male, white, stage:Stage IIIB, dead, 801 days	585.6
TCGA-VQ-A91Q-01A	61 years, male, stage:Stage IV, dead, 633 days	585.1
TCGA-VQ-AA6G-01A	68 years, male, white, stage:Stage IIA, dead, 792 days	585.1
TCGA-VQ-A8PF-01A	76 years, male, stage:Stage IIIB, dead, 76 days	584.7
TCGA-VQ-A8PB-01A	65 years, female, white, stage:Stage II, dead, 1043 days	582.3
TCGA-IN-A6RJ-01A	64 years, male, white, stage:Stage IA, alive, 379 days	581.8
TCGA-CD-8529-01A	65 years, male, asian, stage:Stage IV, alive, 374 days	581.5
TCGA-VQ-AA6D-01A	52 years, female, stage:Stage IIIA, alive, 521 days	580.8
TCGA-MX-A666-01A	61 years, male, white, stage:Stage IIA, alive, 427 days	580.7
TCGA-CG-5726-01A	73 years, male, stage:Stage IA, dead, 881 days	578.2
TCGA-CG-5717-01A	58 years, male, stage:Stage II, dead, 212 days	577.7
TCGA-F1-A72C-01A	68 years, male, asian, stage:Stage IIA, alive, 346 days	576.0
TCGA-BR-4279-01A	43 years, male, white, stage:Stage II, dead, 291 days	575.8
TCGA-IN-A7NT-01A	73 years, female, white, stage:Stage IIB, alive, 323 days	573.3
TCGA-BR-6455-01A	59 years, male, white, stage:Stage IIB, dead, 422 days	573.1
TCGA-SW-A7EA-01A	61 years, female, white, stage:Stage IB, alive, 579 days	572.4
TCGA-VQ-A94O-01A	74 years, male, black or african american, stage:Stage IIIC, dead, 640 days	572.0
TCGA-IN-A6RN-01A	72 years, female, white, stage:Stage IIA, alive, 594 days	570.3
TCGA-D7-A4YU-01A	73 years, male, white, stage:Stage IIIB, alive, 500 days	569.9
TCGA-BR-6707-01A	75 years, male, white, stage:Stage IIA, dead, 605 days	567.6
TCGA-IN-7806-01A	50 years, male, white, stage:Stage IIB, alive, 1106 days	566.7
TCGA-RD-A8NB-01A	80 years, female, white, stage:Stage IIIA, dead, 513 days	560.4
TCGA-IN-A6RS-01A	76 years, male, white, stage:Stage IA, alive, 383 days	556.3
TCGA-BR-8680-01A	45 years, male, asian, stage:Stage IV, alive, 972 days	556.2
TCGA-IP-7968-01A	74 years, male, white, stage:Stage IIIB, alive, 77 days	556.1
TCGA-HU-8610-01A	75 years, male, asian, stage:Stage IA, alive, 23 days	555.8
TCGA-BR-7717-01A	63 years, male, white, stage:Stage IV, dead, 552 days	555.3
TCGA-BR-A4J6-01A	69 years, female, white, stage:Stage IIA, alive, 20 days	555.2
TCGA-HU-8238-01A	56 years, male, asian, stage:'--, alive, 46 days	554.3
TCGA-HU-A4H2-01A	58 years, female, asian, stage:Stage IIIB, alive, 394 days	549.4
TCGA-BR-7851-01A	74 years, male, white, stage:Stage IIB, dead, 574 days	548.8
TCGA-VQ-A8PP-01A	76 years, male, stage:Stage IV, dead, 712 days	543.8
TCGA-VQ-A924-01A	69 years, male, stage:Stage II, dead, 1686 days	542.3
TCGA-VQ-A8E2-01A	57 years, male, asian, stage:Stage IIIB, alive, 1319 days	541.4
TCGA-BR-6852-01A	64 years, female, white, stage:Stage IIA, alive, 1367 days	540.3
TCGA-VQ-A8P8-01A	72 years, female, black or african american, stage:Stage IIB, alive, 942 days	539.9
TCGA-SW-A7EB-01A	45 years, male, white, stage:Stage IIIA, alive, 176 days	538.0
TCGA-HU-A4HB-01A	68 years, male, asian, stage:Stage IIB, dead, 477 days	536.1
TCGA-RD-A7BS-01A	46 years, male, white, stage:Stage IIIA, dead, 336 days	534.5
TCGA-R5-A7O7-01A	51 years, male, white, stage:Stage IV, alive, 1389 days	531.5
TCGA-BR-8590-01A	62 years, male, white, stage:Stage IIIC, dead, 284 days	531.1
TCGA-HU-A4GQ-01A	71 years, male, asian, stage:Stage IIIC, dead, 3 days	529.1
TCGA-CG-4444-01A	76 years, male, stage:Stage IIIA, alive, 1431 days	526.3
TCGA-D7-6822-01A	77 years, male, white, stage:Stage IB, alive, 375 days	524.0
TCGA-CG-4469-01A	70 years, male, stage:Stage IV, dead, 215 days	519.8
TCGA-F1-6874-01A	79 years, male, white, stage:Stage IB, alive, 440 days	517.8
TCGA-VQ-A8PD-01A	69 years, male, white, stage:Stage IIIC, dead, 496 days	516.9
TCGA-VQ-A8PH-01A	62 years, male, white, stage:Stage IIIB, dead, 389 days	514.2
TCGA-VQ-AA6J-01A	75 years, male, black or african american, stage:Stage IIIB, alive, 838 days	514.2
TCGA-HU-A4H4-01A	53 years, female, asian, stage:Stage IIB, alive, 725 days	514.1
TCGA-VQ-A928-01A	49 years, male, white, stage:Stage IV, dead, 174 days	513.7
TCGA-BR-8081-01A	71 years, female, white, stage:Stage IIB, alive, 981 days	513.0
TCGA-CD-A486-01A	68 years, male, asian, stage:Stage IIA, dead, 192 days	512.2
TCGA-VQ-A8DU-01A	63 years, male, white, stage:Stage IIIA, dead, 166 days	511.5
TCGA-VQ-A8PO-01A	74 years, male, white, stage:Stage IIB, dead, 282 days	510.5
TCGA-HF-7132-01A	male, stage:Stage II, alive, 2351 days	509.6
TCGA-HU-A4G9-01A	67 years, female, asian, stage:Stage IA, alive, 736 days	506.9
TCGA-D7-6528-01A	70 years, female, white, stage:Stage IB, alive, 463 days	504.4
TCGA-D7-6524-01A	53 years, male, white, stage:Stage II, alive, 543 days	502.4
TCGA-D7-A6F2-01A	62 years, male, white, stage:Stage IB, alive, 476 days	501.1
TCGA-BR-8485-01A	68 years, female, white, stage:Stage IIIC, alive, 280 days	500.9
TCGA-D7-A748-01A	41 years, female, white, stage:Stage IV, dead, 132 days	500.4
TCGA-HU-8244-01A	77 years, female, asian, stage:Stage IA, alive, 742 days	499.5
TCGA-HU-A4H5-01A	71 years, male, asian, stage:Stage IB, alive, 724 days	497.9
TCGA-BR-6803-01A	54 years, female, white, stage:Stage IIA, alive, 949 days	497.8
TCGA-HU-A4H6-01A	72 years, female, asian, stage:Stage IIIA, alive, 644 days	495.3
TCGA-CG-4437-01A	83 years, male, stage:Stage II, alive, 245 days	494.9
TCGA-BR-A4PF-01A	72 years, male, white, stage:Stage IIIB, alive, 35 days	494.3
TCGA-CG-4441-01A	83 years, male, stage:Stage IIIA, dead, 426 days	493.5
TCGA-VQ-AA69-01A	35 years, male, white, stage:Stage IIIA, alive, 864 days	489.8
TCGA-BR-8687-01A	67 years, female, white, stage:Stage IIIC, dead, 250 days	487.2
TCGA-CG-5721-01A	58 years, male, stage:Stage IV, alive, 183 days	486.5
TCGA-VQ-A91S-01A	63 years, male, black or african american, stage:Stage IIIB, alive, 1000 days	485.4
TCGA-VQ-A91Z-01A	67 years, female, white, stage:Stage IIIA, alive, 1690 days	482.0
TCGA-VQ-A94U-01A	70 years, male, white, stage:Stage IIB, alive, 819 days	481.2
TCGA-D7-8572-01A	57 years, male, white, stage:Stage IIB, alive, 511 days	480.8
TCGA-CG-5718-01A	78 years, female, stage:Stage II, dead, 1095 days	479.6
TCGA-D7-6521-01A	65 years, male, white, stage:'--, alive, 564 days	476.1
TCGA-IN-AB1V-01A	63 years, male, white, stage:Stage IA, alive, 479 days	473.5
TCGA-RD-A7BT-01A	66 years, male, native hawaiian or other pacific islander, stage:Stage IV, dead, 262 days	471.9
TCGA-HU-A4GD-01A	56 years, male, asian, stage:Stage IIB, alive, 692 days	471.2
TCGA-BR-8077-01A	58 years, female, white, stage:Stage IIIB, alive, 21 days	471.0
TCGA-F1-A448-01A	70 years, male, white, stage:Stage IIIB, alive, 647 days	470.4
TCGA-BR-8291-01A	61 years, male, white, stage:Stage IIB, dead, 607 days	469.6
TCGA-B7-A5TK-01A	51 years, male, white, stage:Stage IIIA, alive, 288 days	469.4
TCGA-RD-A8N9-01A	63 years, female, asian, stage:Stage II, alive, 1083 days	467.5
TCGA-IN-A7NR-01A	64 years, female, white, stage:Stage IV, alive, 198 days	466.9
TCGA-HU-A4HD-01A	73 years, male, asian, stage:Stage IIIA, alive, 1016 days	466.4
TCGA-BR-6709-01A	57 years, female, white, stage:Stage IIIB, dead, 370 days	465.7
TCGA-FP-A9TM-01A	77 years, male, white, stage:'--, alive, 189 days	462.8
TCGA-BR-7901-01A	74 years, male, white, stage:Stage IIB, dead, 105 days	461.8
TCGA-CD-5803-01A	78 years, female, asian, stage:Stage II, dead, 341 days	461.7
TCGA-D7-5578-01A	80 years, male, white, stage:Stage IIIA, alive, 385 days	460.7
TCGA-CD-8530-01A	51 years, male, asian, stage:Stage II, alive, 377 days	460.1
TCGA-BR-8487-01A	64 years, female, white, stage:Stage IIA, alive, 34 days	458.2
TCGA-IN-8462-01A	80 years, male, white, stage:Stage IIB, alive, 572 days	457.6
TCGA-VQ-A8P3-01A	72 years, male, white, stage:Stage IIIA, alive, 1132 days	453.2
TCGA-VQ-A92D-01A	67 years, male, white, stage:Stage IB, alive, 2032 days	452.3
TCGA-HF-A5NB-01A	75 years, female, stage:Stage IIIC, alive, 928 days	451.4
TCGA-VQ-A927-01A	81 years, male, white, stage:Stage IIIB, dead, 200 days	451.0
TCGA-CG-4460-01A	66 years, female, stage:Stage IV, dead, 669 days	450.6
TCGA-HU-A4G2-01A	45 years, male, asian, stage:Stage IIB, alive, 739 days	449.5
TCGA-FP-8099-01A	79 years, male, white, stage:Stage IIA, alive, 519 days	449.0
TCGA-VQ-AA6K-01A	59 years, male, white, stage:Stage IIIC, dead, 378 days	448.4
TCGA-CG-4301-01A	75 years, female, stage:Stage IV, alive, 92 days	444.7
TCGA-BR-7723-01A	59 years, male, white, stage:Stage IIIB, dead, 874 days	444.1
TCGA-VQ-A8PC-01A	65 years, male, white, stage:Stage IIIA, dead, 1407 days	442.5
TCGA-D7-6527-01A	62 years, male, white, stage:Stage II, dead, 312 days	442.3
TCGA-HF-7134-01A	male, stage:Stage IA, alive, 1588 days	441.2
TCGA-VQ-A8E3-01A	79 years, male, white, stage:Stage IIA, dead, 661 days	441.0
TCGA-BR-8369-01A	76 years, female, white, stage:Stage IIIB, alive, 427 days	441.0
TCGA-BR-8366-01A	80 years, female, white, stage:Stage IIA, alive, 29 days	440.6
TCGA-BR-6457-01A	69 years, male, white, stage:Stage IIA, alive, 416 days	439.4
TCGA-BR-6458-01A	57 years, female, white, stage:Stage IIB, dead, 588 days	439.1
TCGA-BR-6456-01A	74 years, female, white, stage:Stage IIB, dead, 526 days	438.8
TCGA-CD-8532-01A	52 years, male, asian, stage:Stage II, dead, 354 days	438.5
TCGA-BR-7196-01A	64 years, male, white, stage:Stage IV, alive, 666 days	436.9
TCGA-CD-5798-01A	82 years, male, asian, stage:Stage II, alive, 408 days	435.8
TCGA-VQ-A922-01A	70 years, male, stage:Stage IV, dead, 275 days	434.7
TCGA-BR-7715-01A	65 years, male, white, stage:Stage IIA, alive, 1023 days	434.2
TCGA-RD-A8N6-01A	78 years, female, white, stage:Stage IIIA, dead, 272 days	433.6
TCGA-KB-A93H-01A	79 years, female, asian, stage:Stage IIB, alive, 1145 days	432.0
TCGA-CG-5724-01A	59 years, male, stage:Stage IV, dead, 366 days	430.8
TCGA-VQ-A91U-01A	78 years, male, asian, stage:Stage IIIA, dead, 52 days	430.5
TCGA-VQ-A91A-01A	67 years, male, white, stage:Stage IIIB, alive, 1200 days	425.1
TCGA-BR-A4CS-01A	77 years, male, white, stage:Stage IIIC, dead, 45 days	424.2
TCGA-BR-8381-01A	51 years, male, white, stage:Stage IIB, alive, 224 days	422.4
TCGA-BR-6565-01A	67 years, male, white, stage:Stage IIB, dead, 279 days	420.0
TCGA-R5-A7ZF-01A	65 years, female, black or african american, stage:Stage IV, dead, 259 days	419.4
TCGA-MX-A663-01A	66 years, male, white, stage:Stage IIA, dead, 300 days	418.9
TCGA-D7-A4Z0-01A	60 years, female, white, stage:Stage IIB, alive, 449 days	418.0
TCGA-HU-A4G3-01A	54 years, male, asian, stage:Stage IIB, alive, 170 days	417.3
TCGA-D7-6526-01A	67 years, female, white, stage:Stage IIIA, alive, 523 days	416.4
TCGA-BR-A4J4-01A	39 years, male, asian, stage:Stage IIIB, alive, 16 days	415.3
TCGA-R5-A7ZI-01A	44 years, female, white, stage:Stage IV, alive, 2267 days	414.5
TCGA-BR-4280-01A	78 years, female, white, stage:Stage III, dead, 201 days	414.3
TCGA-CD-A4MG-01A	76 years, male, asian, stage:Stage IIA, dead, 200 days	414.2
TCGA-ZQ-A9CR-01A	79 years, female, white, stage:Stage IIIC, dead, 24 days	412.7
TCGA-BR-8373-01A	65 years, female, white, stage:Stage IIIA, alive, 450 days	412.5
TCGA-FP-7916-01A	77 years, male, asian, stage:Stage IIIC, dead, 428 days	412.2
TCGA-BR-4187-01A	56 years, male, white, stage:'--, dead, 141 days	411.7
TCGA-CD-A487-01A	51 years, male, asian, stage:Stage IIB, alive, 374 days	411.4
TCGA-BR-7197-01A	69 years, male, white, stage:Stage II, alive, 280 days	404.8
TCGA-BR-8361-01A	71 years, female, white, stage:Stage IIIC, alive, 946 days	403.0
TCGA-CD-8535-01A	59 years, male, asian, stage:Stage IIIA, alive, 390 days	402.8
TCGA-HU-8249-01A	76 years, male, asian, stage:Stage IIIA, alive, 881 days	396.9
TCGA-BR-8060-01A	75 years, female, white, stage:Stage IIB, dead, 348 days	396.9
TCGA-FP-A4BF-01A	68 years, male, white, stage:Stage IIIA, dead, 168 days	396.4
TCGA-IN-AB1X-01A	78 years, female, white, stage:Stage IIA, alive, 411 days	395.2
TCGA-BR-A44U-01A	70 years, male, white, stage:Stage IIIB, dead, 422 days	394.4
TCGA-FP-8211-01A	62 years, male, white, stage:Stage IIB, alive, 413 days	390.8
TCGA-BR-8588-01A	55 years, female, white, stage:Stage IIB, alive, 389 days	390.7
TCGA-BR-A4J5-01A	56 years, male, asian, stage:Stage IIIA, alive, 862 days	388.8
TCGA-HU-A4GX-01A	70 years, female, asian, stage:Stage IIIC, alive, 616 days	385.2
TCGA-F1-6875-01A	79 years, male, black or african american, stage:Stage IA, dead, 2197 days	383.2
TCGA-BR-8683-01A	75 years, male, asian, stage:Stage IIIB, dead, 300 days	381.9
TCGA-CD-A48A-01A	57 years, male, asian, stage:Stage IIA, alive, 378 days	381.8
TCGA-BR-6566-01A	64 years, female, white, stage:Stage IIA, alive, 997 days	380.4
TCGA-HU-A4GJ-01A	60 years, female, asian, stage:Stage IIIC, alive, 650 days	379.6
TCGA-RD-A8MV-01A	56 years, male, white, stage:Stage IIIB, alive, 3720 days	378.8
TCGA-D7-6519-01A	64 years, female, white, stage:'--, alive, 625 days	378.1
TCGA-D7-A74A-01A	61 years, female, white, stage:Stage IIIA, alive, 607 days	378.1
TCGA-CG-5725-01A	72 years, male, stage:Stage IB, dead, 457 days	376.9
TCGA-HU-8604-01A	82 years, female, asian, stage:Stage IIA, alive, 694 days	376.7
TCGA-BR-8080-01A	72 years, female, white, stage:Stage IIIC, dead, 292 days	375.7
TCGA-FP-7998-01A	77 years, male, white, stage:Stage IIIC, alive, 678 days	374.7
TCGA-R5-A805-01A	71 years, male, white, stage:Stage IIIB, dead, 281 days	373.7
TCGA-CG-5719-01A	54 years, female, stage:Stage IV, alive, 31 days	373.0
TCGA-BR-8364-01A	42 years, female, white, stage:Stage IIIC, alive, 675 days	360.4
TCGA-BR-A4J8-01A	71 years, female, white, stage:Stage IIIB, alive, 411 days	360.4
TCGA-RD-A7BW-01A	68 years, female, white, stage:Stage IB, dead, 156 days	359.2
TCGA-CG-5722-01A	67 years, female, stage:Stage IV, alive, 30 days	358.2
TCGA-BR-6564-01A	46 years, female, white, stage:Stage IIIA, dead, 794 days	358.1
TCGA-HU-A4GY-01A	76 years, female, asian, stage:Stage IIIA, alive, 8 days	349.6
TCGA-D7-6522-01A	58 years, male, white, stage:Stage IB, alive, 566 days	347.8
TCGA-BR-6801-01A	70 years, male, white, stage:Stage IIA, alive, 1223 days	343.9
TCGA-D7-8579-01A	66 years, female, white, stage:Stage IIB, alive, 636 days	341.9
TCGA-BR-6453-01A	54 years, male, white, stage:Stage IIA, alive, 485 days	341.4
TCGA-BR-4253-01A	80 years, female, white, stage:Stage IIIA, dead, 124 days	338.5
TCGA-ZA-A8F6-01A	71 years, male, white, stage:Stage IB, alive, 525 days	337.7
TCGA-BR-8677-01A	74 years, female, white, stage:Stage IIIB, alive, 813 days	330.4
TCGA-D7-8578-01A	72 years, male, white, stage:Stage IB, alive, 643 days	327.0
TCGA-BR-7722-01A	62 years, male, white, stage:Stage IIB, dead, 466 days	326.4
TCGA-FP-8210-01A	48 years, male, asian, stage:Stage IIIA, dead, 153 days	323.7
TCGA-BR-A4J7-01A	49 years, male, asian, stage:Stage IIB, alive, 989 days	322.4
TCGA-BR-8682-01A	52 years, male, asian, stage:Stage IIB, alive, 991 days	321.5
TCGA-IN-8663-01A	68 years, male, white, stage:Stage IIB, dead, 103 days	319.0
TCGA-RD-A8N0-01A	53 years, female, white, stage:Stage IIIB, alive, 1236 days	318.3
TCGA-CG-5720-01A	71 years, male, stage:Stage IB, dead, 30 days	317.1
TCGA-CD-A4MH-01A	86 years, female, asian, stage:Stage IIA, alive, 371 days	307.6
TCGA-BR-8483-01A	59 years, male, white, stage:Stage IIIA, alive, 164 days	306.3
TCGA-VQ-A94P-01A	57 years, male, white, stage:'--, dead, 81 days	305.6
TCGA-BR-A4QL-01A	75 years, female, white, stage:Stage IIIB, dead, 491 days	300.5
TCGA-BR-8686-01A	69 years, male, asian, stage:Stage IIIB, dead, 635 days	297.4
TCGA-D7-6818-01A	53 years, male, white, stage:Stage IIIA, dead, 376 days	294.0
TCGA-D7-A747-01A	57 years, male, white, stage:Stage IIB, dead, 255 days	294.0
TCGA-KB-A93G-01A	68 years, male, white, stage:Stage IB, alive, 613 days	293.6
TCGA-BR-6705-01A	68 years, female, white, stage:Stage IIIB, dead, 779 days	291.0
TCGA-BR-A4IV-01A	47 years, male, asian, stage:Stage IIIB, dead, 869 days	289.4
TCGA-B7-A5TJ-01A	74 years, male, white, stage:Stage IIB, alive, 335 days	288.9
TCGA-CD-5813-01A	60 years, male, asian, stage:Stage II, dead, 377 days	287.7
TCGA-CD-A489-01A	58 years, male, asian, stage:Stage IIA, dead, 344 days	287.3
TCGA-D7-8575-01A	75 years, male, white, stage:Stage IIIA, dead, 554 days	285.5
TCGA-BR-8384-01A	69 years, male, white, stage:Stage IIIC, alive, 113 days	284.0
TCGA-BR-8371-01A	62 years, male, white, stage:Stage IIIB, dead, 359 days	283.2
TCGA-D7-8573-01A	57 years, male, white, stage:Stage IIA, alive, 593 days	273.3
TCGA-VQ-A8PQ-01A	50 years, female, white, stage:Stage IV, dead, 476 days	272.2
TCGA-RD-A8N4-01A	58 years, female, white, stage:Stage IIIA, alive, 2171 days	271.4
TCGA-CG-5734-01A	68 years, male, stage:Stage IIIA, dead, 243 days	266.3
TCGA-CD-8534-01A	41 years, male, asian, stage:Stage II, alive, 367 days	265.1
TCGA-IN-7808-01A	59 years, male, white, stage:'--, dead, 105 days	262.0
TCGA-MX-A5UG-01A	78 years, male, asian, stage:Stage IIIA, dead, 113 days	261.7
TCGA-BR-8365-01A	70 years, female, white, stage:Stage IIA, dead, 533 days	259.2
TCGA-BR-6563-01A	60 years, male, white, stage:Stage IIB, alive, 1190 days	257.9
TCGA-BR-8592-01A	63 years, female, white, stage:Stage IIIB, dead, 191 days	257.1
TCGA-BR-7959-01A	59 years, male, white, stage:Stage IIIA, alive, 1010 days	240.6
TCGA-CD-5801-01A	69 years, male, asian, stage:Stage IIIA, dead, 401 days	237.9
TCGA-FP-8209-01A	49 years, male, white, stage:Stage IB, dead, 1811 days	236.5
TCGA-D7-8574-01A	72 years, male, white, stage:Stage IIIA, alive, 523 days	234.8
TCGA-BR-A44T-01A	53 years, female, white, stage:Stage IIA, alive, 1038 days	219.0
TCGA-RD-A8N5-01A	78 years, male, white, stage:Stage IIIA, dead, 1747 days	215.7
TCGA-D7-A6EX-01A	72 years, female, white, stage:Stage IIIA, alive, 344 days	209.4
TCGA-BR-A4J9-01A	55 years, male, white, stage:Stage IIA, alive, 14 days	206.9
TCGA-RD-A8N2-01A	59 years, female, white, stage:Stage IB, alive, 3540 days	203.1
TCGA-BR-6710-01A	41 years, male, white, stage:Stage IB, alive, 273 days	196.8
TCGA-BR-8380-01A	55 years, male, white, stage:Stage IIIC, dead, 21 days	196.6
TCGA-VQ-A8DV-01A	48 years, male, white, stage:Stage IB, dead, 403 days	190.6
TCGA-CD-8533-01A	48 years, male, asian, stage:Stage II, alive, 468 days	189.7
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STOMACH CANCER - Protein expressionⁱ A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here. Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

Antibody stainingⁱ Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.	Antibody HPA007730	Antibody CAB004682
Staining
High
Medium
Low
Not detected
Intensity
Strong
Moderate
Weak
Negative
Quantity
>75%
75%-25%
<25%
None
Location
Nuclear
Cytoplasmic/membranous
Cytoplasmic/membranous,nuclear
None
Adenocarcinoma, NOS
Adenocarcinoma, NOS Adenocarcinoma, High grade