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SLC35A3
HPA
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  • SLC35A3
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

SLC35A3
Synonyms
Gene descriptioni

Full gene name according to HGNC.

Solute carrier family 35 member A3
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Human disease related genes
Metabolic proteins
Potential drug targets
Transporters
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 1
Cytoband p21.2
Chromosome location (bp) 99969351 - 100035634
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

14
Ensembl ENSG00000117620 (version 109)
Entrez gene 23443
HGNC HGNC:11023
UniProt Q9Y2D2 (UniProt - Evidence at protein level)
neXtProt NX_Q9Y2D2
GeneCards SLC35A3
Antibodypedia SLC35A3 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Transports diphosphate-N-acetylglucosamine (UDP-GlcNAc) from the cytosol into the lumen of the Golgi apparatus, functioning as an antiporter that exchanges UDP-N-acetyl-alpha-D-glucosamine for UMP 1. May supply UDP-GlcNAc as substrate for Golgi-resident glycosyltransferases that generate highly branched, multiantennary complex N-glycans and keratan sulfate 2, 3. However, the exact role of SLC35A3 still needs to be elucidated, it could be a member of a catalytically more efficient multiprotein complex rather than function independently as a single transporter 4.... show less
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Antiport, Sugar transport, Transport
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes a UDP-N-acetylglucosamine transporter found in the golgi apparatus membrane. In cattle, a missense mutation in this gene causes complex vertebral malformation. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Nov 2012]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
SLC35A3-201
ENSP00000359172
ENST00000370153
Q9Y2D2
[Direct mapping] UDP-N-acetylglucosamine transporter
Show all
Metabolic proteins
Transporters
   Electrochemical Potential-driven transporters
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   >9TM proteins predicted by MDM
Disease related genes
Potential drug targets
Human disease related genes
   Congenital malformations
   Congenital malformations of the musculoskeletal system
Mapped to neXtProt
   neXtProt - Evidence at protein level
   DeepTMHMM predicted membrane proteins
Show all
GO:0000139 [Golgi membrane]
GO:0005459 [UDP-galactose transmembrane transporter activity]
GO:0005462 [UDP-N-acetylglucosamine transmembrane transporter activity]
GO:0005515 [protein binding]
GO:0005794 [Golgi apparatus]
GO:0006047 [UDP-N-acetylglucosamine metabolic process]
GO:0008643 [carbohydrate transport]
GO:0015165 [pyrimidine nucleotide-sugar transmembrane transporter activity]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0072334 [UDP-galactose transmembrane transport]
GO:0090481 [pyrimidine nucleotide-sugar transmembrane transport]
GO:1990569 [UDP-N-acetylglucosamine transmembrane transport]
Show all
367 aa
40.7 kDa
No >9
SLC35A3-204
ENSP00000414947
ENST00000427993
Q9Y2D2
[Direct mapping] UDP-N-acetylglucosamine transporter
Show all
Metabolic proteins
Transporters
   Electrochemical Potential-driven transporters
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   9TM proteins predicted by MDM
Disease related genes
Potential drug targets
Human disease related genes
   Congenital malformations
   Congenital malformations of the musculoskeletal system
Mapped to neXtProt
   neXtProt - Evidence at protein level
   DeepTMHMM predicted membrane proteins
Show all
GO:0000139 [Golgi membrane]
GO:0005459 [UDP-galactose transmembrane transporter activity]
GO:0005462 [UDP-N-acetylglucosamine transmembrane transporter activity]
GO:0005515 [protein binding]
GO:0005794 [Golgi apparatus]
GO:0006047 [UDP-N-acetylglucosamine metabolic process]
GO:0008643 [carbohydrate transport]
GO:0015165 [pyrimidine nucleotide-sugar transmembrane transporter activity]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0072334 [UDP-galactose transmembrane transport]
GO:0090481 [pyrimidine nucleotide-sugar transmembrane transport]
GO:1990569 [UDP-N-acetylglucosamine transmembrane transport]
Show all
325 aa
36 kDa
No 9
SLC35A3-205
ENSP00000418527
ENST00000465289
Q9Y2D2
[Direct mapping] UDP-N-acetylglucosamine transporter
Show all
Metabolic proteins
Transporters
   Electrochemical Potential-driven transporters
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   9TM proteins predicted by MDM
Disease related genes
Potential drug targets
Human disease related genes
   Congenital malformations
   Congenital malformations of the musculoskeletal system
Mapped to neXtProt
   neXtProt - Evidence at protein level
   DeepTMHMM predicted membrane proteins
Show all
GO:0000139 [Golgi membrane]
GO:0005459 [UDP-galactose transmembrane transporter activity]
GO:0005462 [UDP-N-acetylglucosamine transmembrane transporter activity]
GO:0005515 [protein binding]
GO:0005794 [Golgi apparatus]
GO:0006047 [UDP-N-acetylglucosamine metabolic process]
GO:0008643 [carbohydrate transport]
GO:0015165 [pyrimidine nucleotide-sugar transmembrane transporter activity]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0072334 [UDP-galactose transmembrane transport]
GO:0090481 [pyrimidine nucleotide-sugar transmembrane transport]
GO:1990569 [UDP-N-acetylglucosamine transmembrane transport]
Show all
325 aa
36 kDa
No 9
SLC35A3-207
ENSP00000433849
ENST00000533028
Q9Y2D2
[Direct mapping] UDP-N-acetylglucosamine transporter
Show all
Metabolic proteins
Transporters
   Electrochemical Potential-driven transporters
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   9TM proteins predicted by MDM
Disease related genes
Potential drug targets
Human disease related genes
   Congenital malformations
   Congenital malformations of the musculoskeletal system
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0000139 [Golgi membrane]
GO:0005459 [UDP-galactose transmembrane transporter activity]
GO:0005462 [UDP-N-acetylglucosamine transmembrane transporter activity]
GO:0005515 [protein binding]
GO:0005794 [Golgi apparatus]
GO:0006047 [UDP-N-acetylglucosamine metabolic process]
GO:0008643 [carbohydrate transport]
GO:0015165 [pyrimidine nucleotide-sugar transmembrane transporter activity]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0072334 [UDP-galactose transmembrane transport]
GO:0090481 [pyrimidine nucleotide-sugar transmembrane transport]
GO:1990569 [UDP-N-acetylglucosamine transmembrane transport]
Show all
325 aa
36 kDa
No 9
SLC35A3-208
ENSP00000491145
ENST00000638336
Q9Y2D2
[Direct mapping] UDP-N-acetylglucosamine transporter
Show all
Metabolic proteins
Transporters
   Electrochemical Potential-driven transporters
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   5TM proteins predicted by MDM
Disease related genes
Potential drug targets
Human disease related genes
   Congenital malformations
   Congenital malformations of the musculoskeletal system
Mapped to neXtProt
   neXtProt - Evidence at protein level
   DeepTMHMM predicted membrane proteins
Show all
GO:0000139 [Golgi membrane]
GO:0005459 [UDP-galactose transmembrane transporter activity]
GO:0005462 [UDP-N-acetylglucosamine transmembrane transporter activity]
GO:0005515 [protein binding]
GO:0005794 [Golgi apparatus]
GO:0006047 [UDP-N-acetylglucosamine metabolic process]
GO:0008643 [carbohydrate transport]
GO:0015165 [pyrimidine nucleotide-sugar transmembrane transporter activity]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0072334 [UDP-galactose transmembrane transport]
GO:0090481 [pyrimidine nucleotide-sugar transmembrane transport]
GO:1990569 [UDP-N-acetylglucosamine transmembrane transport]
Show all
220 aa
24.5 kDa
No 5
SLC35A3-209
ENSP00000491533
ENST00000638338
A0A1W2PPH4
[Direct mapping] UDP-N-acetylglucosamine transporter
Show all
Metabolic proteins
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   7TM proteins predicted by MDM
Human disease related genes
   Congenital malformations
   Congenital malformations of the musculoskeletal system
   DeepTMHMM predicted membrane proteins
Show all
GO:0000139 [Golgi membrane]
GO:0005794 [Golgi apparatus]
GO:0008643 [carbohydrate transport]
GO:0015165 [pyrimidine nucleotide-sugar transmembrane transporter activity]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0090481 [pyrimidine nucleotide-sugar transmembrane transport]
Show all
315 aa
35.4 kDa
No 7
SLC35A3-210
ENSP00000491146
ENST00000638371
A0A1W2PNY6
[Direct mapping] UDP-N-acetylglucosamine transporter
Show all
Metabolic proteins
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   8TM proteins predicted by MDM
Human disease related genes
   Congenital malformations
   Congenital malformations of the musculoskeletal system
   DeepTMHMM predicted membrane proteins
Show all
GO:0000139 [Golgi membrane]
GO:0005794 [Golgi apparatus]
GO:0008643 [carbohydrate transport]
GO:0015165 [pyrimidine nucleotide-sugar transmembrane transporter activity]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0090481 [pyrimidine nucleotide-sugar transmembrane transport]
Show all
318 aa
35.5 kDa
No 8
SLC35A3-213
ENSP00000492681
ENST00000638988
A0A1W2PRN3
[Direct mapping] UDP-N-acetylglucosamine transporter
Show all
Metabolic proteins
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   7TM proteins predicted by MDM
Human disease related genes
   Congenital malformations
   Congenital malformations of the musculoskeletal system
   DeepTMHMM predicted membrane proteins
Show all
GO:0000139 [Golgi membrane]
GO:0005794 [Golgi apparatus]
GO:0008643 [carbohydrate transport]
GO:0015165 [pyrimidine nucleotide-sugar transmembrane transporter activity]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0090481 [pyrimidine nucleotide-sugar transmembrane transport]
Show all
257 aa
28.8 kDa
No 7
SLC35A3-216
ENSP00000492169
ENST00000639221
A0A1W2PQL8
[Direct mapping] UDP-N-acetylglucosamine transporter
Show all
Metabolic proteins
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   5TM proteins predicted by MDM
Human disease related genes
   Congenital malformations
   Congenital malformations of the musculoskeletal system
   DeepTMHMM predicted membrane proteins
Show all
GO:0000139 [Golgi membrane]
GO:0005794 [Golgi apparatus]
GO:0008643 [carbohydrate transport]
GO:0015165 [pyrimidine nucleotide-sugar transmembrane transporter activity]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0090481 [pyrimidine nucleotide-sugar transmembrane transport]
Show all
228 aa
25.8 kDa
No 5
SLC35A3-217
ENSP00000490964
ENST00000639807
A0A1W2PNF0
[Direct mapping] UDP-N-acetylglucosamine transporter
Show all
Metabolic proteins
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   5TM proteins predicted by MDM
Human disease related genes
   Congenital malformations
   Congenital malformations of the musculoskeletal system
   DeepTMHMM predicted membrane proteins
Show all
GO:0000139 [Golgi membrane]
GO:0005794 [Golgi apparatus]
GO:0008643 [carbohydrate transport]
GO:0015165 [pyrimidine nucleotide-sugar transmembrane transporter activity]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0090481 [pyrimidine nucleotide-sugar transmembrane transport]
Show all
287 aa
32 kDa
No 5
SLC35A3-218
ENSP00000492135
ENST00000639994
A0A1W2PQH2
[Direct mapping] UDP-N-acetylglucosamine transporter
Show all
Metabolic proteins
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   8TM proteins predicted by MDM
Human disease related genes
   Congenital malformations
   Congenital malformations of the musculoskeletal system
   DeepTMHMM predicted membrane proteins
Show all
GO:0000139 [Golgi membrane]
GO:0005794 [Golgi apparatus]
GO:0008643 [carbohydrate transport]
GO:0015165 [pyrimidine nucleotide-sugar transmembrane transporter activity]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0090481 [pyrimidine nucleotide-sugar transmembrane transport]
Show all
296 aa
33 kDa
No 8
SLC35A3-221
ENSP00000491789
ENST00000640600
A0A1W2PQ60
[Direct mapping] UDP-N-acetylglucosamine transporter
Show all
Metabolic proteins
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   8TM proteins predicted by MDM
Human disease related genes
   Congenital malformations
   Congenital malformations of the musculoskeletal system
   DeepTMHMM predicted membrane proteins
Show all
GO:0000139 [Golgi membrane]
GO:0005794 [Golgi apparatus]
GO:0008643 [carbohydrate transport]
GO:0015165 [pyrimidine nucleotide-sugar transmembrane transporter activity]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0090481 [pyrimidine nucleotide-sugar transmembrane transport]
Show all
328 aa
36.6 kDa
No 8
SLC35A3-222
ENSP00000492801
ENST00000640715
A0A1W2PSD1
[Direct mapping] UDP-N-acetylglucosamine transporter
Show all
Metabolic proteins
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   7TM proteins predicted by MDM
Human disease related genes
   Congenital malformations
   Congenital malformations of the musculoskeletal system
   DeepTMHMM predicted membrane proteins
Show all
GO:0000139 [Golgi membrane]
GO:0005794 [Golgi apparatus]
GO:0008643 [carbohydrate transport]
GO:0015165 [pyrimidine nucleotide-sugar transmembrane transporter activity]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0090481 [pyrimidine nucleotide-sugar transmembrane transport]
Show all
269 aa
30.3 kDa
No 7
SLC35A3-224
ENSP00000492771
ENST00000640732
A0A1W2PRT7
[Direct mapping] UDP-N-acetylglucosamine transporter
Show all
Metabolic proteins
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   6TM proteins predicted by MDM
Human disease related genes
   Congenital malformations
   Congenital malformations of the musculoskeletal system
   DeepTMHMM predicted membrane proteins
Show all
GO:0000139 [Golgi membrane]
GO:0005794 [Golgi apparatus]
GO:0008643 [carbohydrate transport]
GO:0015165 [pyrimidine nucleotide-sugar transmembrane transporter activity]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0090481 [pyrimidine nucleotide-sugar transmembrane transport]
Show all
284 aa
31.4 kDa
No 6

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