Expression of TTR in liver cancer - The Human Protein Atlas

LIVER HEPATOCELLULAR CARCINOMA (TCGA) - Interactive survival scatter plotⁱ

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisⁱ

TTR is not prognostic in Liver Hepatocellular Carcinoma (TCGA)

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 5466.56

Median expressionⁱ : N/A

Median follow up timeⁱ : N/A

P scoreⁱ N/A

5-year survival highⁱ N/A

5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average pTPM

5122.1

Number of samples

362

Samples

Sample	Description	pTPM
TCGA-G3-A7M5-01A	76 years, male, asian, stage:Stage I, alive, 447 days	43035.6
TCGA-DD-AACO-01A	40 years, male, asian, stage:Stage I, alive, 1876 days	28064.8
TCGA-ZS-A9CE-01A	79 years, female, white, stage:Stage II, alive, 1241 days	26104.9
TCGA-BC-A3KF-01A	66 years, female, white, stage:Stage I, alive, 8 days	25353.5
TCGA-RC-A7SB-01A	53 years, male, asian, stage:Stage II, alive, 588 days	24344.2
TCGA-K7-A5RG-01A	66 years, male, black or african american, stage:Stage I, alive, 519 days	23082.4
TCGA-DD-AAE3-01A	50 years, male, asian, stage:Stage I, alive, 566 days	22819.6
TCGA-BD-A2L6-01A	69 years, male, white, stage:'--, alive, 1363 days	22212.3
TCGA-ED-A7XO-01A	29 years, male, asian, stage:Stage IIIA, alive, 427 days	20734.9
TCGA-2Y-A9GZ-01A	82 years, female, white, stage:Stage II, dead, 848 days	19877.0
TCGA-DD-AAEI-01A	72 years, male, asian, stage:Stage I, alive, 1531 days	19548.5
TCGA-DD-AACU-01A	59 years, male, asian, stage:Stage I, alive, 1567 days	17614.2
TCGA-DD-AADS-01A	63 years, male, asian, stage:Stage I, alive, 474 days	17181.6
TCGA-GJ-A9DB-01A	68 years, male, white, stage:Stage I, dead, 67 days	15997.7
TCGA-DD-A3A5-01A	66 years, female, white, stage:Stage III, dead, 3125 days	15825.6
TCGA-RC-A7SK-01A	59 years, male, asian, stage:Stage I, alive, 472 days	15718.6
TCGA-T1-A6J8-01A	68 years, male, white, stage:'--, alive, 23 days	15348.9
TCGA-DD-AAE4-01A	49 years, female, asian, stage:Stage I, alive, 608 days	15306.3
TCGA-2Y-A9GS-01A	58 years, male, white, stage:'--, dead, 724 days	15162.4
TCGA-FV-A2QR-01A	75 years, male, white, stage:Stage I, dead, 581 days	14863.0
TCGA-BC-A10Y-01A	76 years, male, white, stage:'--, dead, 711 days	14566.1
TCGA-2Y-A9H4-01A	68 years, male, black or african american, stage:Stage I, alive, 1452 days	13665.5
TCGA-DD-AAVW-01A	35 years, male, asian, stage:Stage I, alive, 2317 days	13660.3
TCGA-K7-A5RF-01A	64 years, male, white, stage:Stage I, alive, 631 days	13458.6
TCGA-DD-AADM-01A	58 years, male, asian, stage:Stage II, dead, 12 days	13389.8
TCGA-DD-A4NK-01A	80 years, female, white, stage:Stage IIIA, dead, 1210 days	13295.3
TCGA-DD-AACV-01A	53 years, male, asian, stage:Stage I, alive, 1531 days	13170.1
TCGA-ES-A2HT-01A	54 years, male, black or african american, stage:Stage I, dead, 438 days	13098.1
TCGA-UB-A7MB-01A	24 years, male, white, stage:Stage II, alive, 601 days	12466.0
TCGA-DD-AAD8-01A	73 years, female, asian, stage:Stage I, alive, 1219 days	12394.8
TCGA-MR-A520-01A	58 years, male, white, stage:Stage I, alive, 229 days	12227.8
TCGA-2Y-A9H8-01A	85 years, female, white, stage:'--, dead, 633 days	12136.6
TCGA-KR-A7K2-01A	64 years, male, white, stage:Stage I, alive, 829 days	11964.3
TCGA-G3-AAV0-01A	58 years, male, asian, stage:Stage I, alive, 476 days	11924.0
TCGA-BC-A5W4-01A	69 years, male, white, stage:Stage IIIA, dead, 547 days	11578.0
TCGA-DD-A4NI-01A	67 years, male, white, stage:Stage II, alive, 816 days	11490.1
TCGA-DD-AACQ-01A	50 years, male, asian, stage:Stage II, dead, 432 days	11448.7
TCGA-DD-AAW0-01A	54 years, male, asian, stage:Stage I, alive, 2015 days	11265.3
TCGA-DD-AADF-01A	64 years, female, asian, stage:Stage I, dead, 115 days	11147.3
TCGA-DD-AACE-01A	62 years, male, asian, stage:Stage I, alive, 2184 days	11052.9
TCGA-DD-AAEA-01A	65 years, male, asian, stage:Stage I, alive, 575 days	10933.0
TCGA-DD-A4NO-01A	65 years, male, white, stage:Stage I, alive, 2245 days	10888.8
TCGA-XR-A8TD-01A	49 years, female, white, stage:Stage IIIB, alive, 1030 days	10816.2
TCGA-DD-AAEH-01A	73 years, male, asian, stage:Stage I, alive, 784 days	10699.2
TCGA-FV-A495-01A	51 years, female, white, stage:Stage II, alive, 1 days	10021.3
TCGA-HP-A5N0-01A	90 years, female, stage:'--, dead, 752 days	10007.0
TCGA-DD-AAE1-01A	52 years, male, asian, stage:Stage I, alive, 552 days	9887.6
TCGA-DD-AAC9-01A	51 years, male, asian, stage:Stage I, alive, 347 days	9856.8
TCGA-BW-A5NO-01A	50 years, male, black or african american, stage:Stage IIIA, alive, 20 days	9645.9
TCGA-DD-AAEB-01A	60 years, male, asian, stage:Stage I, alive, 478 days	9627.9
TCGA-G3-AAUZ-01A	48 years, male, stage:Stage I, alive, 480 days	9601.7
TCGA-DD-AAVS-01A	56 years, male, asian, stage:Stage I, alive, 1823 days	9584.4
TCGA-DD-AACF-01A	68 years, male, asian, stage:Stage I, dead, 365 days	9530.8
TCGA-DD-AADR-01A	58 years, male, asian, stage:Stage I, alive, 2028 days	9461.0
TCGA-NI-A4U2-01A	71 years, male, white, stage:Stage IIIA, dead, 1791 days	9428.5
TCGA-WX-AA46-01A	61 years, male, white, stage:Stage II, alive, 756 days	9134.5
TCGA-G3-A5SK-01A	58 years, male, white, stage:Stage I, alive, 744 days	9129.9
TCGA-CC-A3MC-01A	54 years, male, asian, stage:Stage IIIA, alive, 363 days	9119.1
TCGA-BC-A69I-01A	69 years, male, white, stage:Stage I, alive, 387 days	9048.8
TCGA-MI-A75I-01A	61 years, male, black or african american, stage:'--, alive, 630 days	8981.0
TCGA-DD-A11C-01A	69 years, male, white, stage:Stage I, alive, 662 days	8868.6
TCGA-ED-A7PY-01A	20 years, female, asian, stage:Stage II, alive, 390 days	8789.5
TCGA-UB-A7MD-01A	67 years, male, black or african american, stage:Stage I, dead, 52 days	8768.7
TCGA-DD-AADL-01A	58 years, male, asian, stage:Stage I, alive, 636 days	8764.6
TCGA-FV-A3R2-01A	75 years, male, white, stage:Stage I, dead, 194 days	8696.1
TCGA-DD-A39X-01A	78 years, female, white, stage:Stage I, dead, 1694 days	8675.6
TCGA-DD-AADV-01A	50 years, male, asian, stage:Stage I, alive, 574 days	8505.4
TCGA-WJ-A86L-01A	68 years, female, white, stage:Stage I, alive, 345 days	8419.5
TCGA-DD-AAVZ-01A	38 years, male, asian, stage:Stage I, alive, 1900 days	8106.2
TCGA-CC-A9FS-01A	55 years, male, asian, stage:Stage II, alive, 211 days	8050.5
TCGA-G3-A3CI-01A	71 years, male, white, stage:Stage I, alive, 180 days	7992.7
TCGA-G3-A5SI-01A	44 years, male, asian, stage:Stage II, dead, 768 days	7983.8
TCGA-UB-AA0V-01A	69 years, female, white, stage:Stage I, alive, 314 days	7962.5
TCGA-2Y-A9GV-01A	54 years, female, white, stage:Stage I, dead, 2532 days	7925.7
TCGA-DD-AAVY-01A	56 years, male, asian, stage:Stage IIIA, alive, 1970 days	7816.1
TCGA-2Y-A9HA-01A	70 years, male, white, stage:Stage II, dead, 36 days	7782.6
TCGA-DD-AAD3-01A	43 years, male, asian, stage:Stage I, alive, 1295 days	7614.1
TCGA-DD-AAEG-01A	59 years, female, asian, stage:Stage I, alive, 719 days	7553.9
TCGA-DD-AAW3-01A	69 years, male, asian, stage:Stage I, alive, 1633 days	7408.3
TCGA-BD-A3ER-01A	62 years, male, white, stage:Stage II, alive, 1115 days	7377.9
TCGA-BC-A110-01A	51 years, female, black or african american, stage:'--, dead, 2116 days	7333.6
TCGA-WQ-AB4B-01A	62 years, male, white, stage:Stage II, alive, 395 days	7282.5
TCGA-DD-A4NN-01A	56 years, female, white, stage:Stage I, dead, 899 days	7211.6
TCGA-2Y-A9H1-01A	58 years, male, white, stage:Stage I, dead, 1229 days	7191.2
TCGA-2Y-A9HB-01A	66 years, male, stage:Stage I, alive, 260 days	7190.7
TCGA-DD-A115-01A	53 years, male, white, stage:Stage IIIA, dead, 2542 days	7148.6
TCGA-DD-AACT-01A	69 years, female, asian, stage:Stage I, alive, 1562 days	7146.4
TCGA-FV-A3I1-01A	81 years, female, white, stage:Stage II, dead, 247 days	7098.5
TCGA-5C-A9VH-01A	70 years, male, white, stage:Stage I, alive, 322 days	7095.0
TCGA-DD-AADU-01A	60 years, male, asian, stage:Stage II, alive, 554 days	7075.3
TCGA-DD-AADK-01A	68 years, female, asian, stage:Stage II, alive, 1049 days	7067.2
TCGA-O8-A75V-01A	54 years, male, stage:Stage I, alive, 538 days	6829.9
TCGA-EP-A12J-01A	62 years, male, black or african american, stage:Stage I, alive, 570 days	6827.9
TCGA-DD-A119-01A	40 years, male, asian, stage:Stage IV, dead, 223 days	6820.5
TCGA-FV-A2QQ-01A	80 years, male, white, stage:Stage I, alive, 729 days	6811.4
TCGA-DD-A11D-01A	57 years, female, white, stage:Stage I, dead, 1560 days	6787.3
TCGA-DD-AACJ-01A	75 years, male, asian, stage:Stage II, alive, 2102 days	6732.8
TCGA-BC-A10T-01A	76 years, male, white, stage:'--, dead, 837 days	6702.0
TCGA-DD-A1EG-01A	76 years, male, white, stage:Stage I, dead, 1372 days	6661.3
TCGA-DD-A73A-01A	71 years, male, white, stage:Stage I, alive, 728 days	6572.1
TCGA-CC-A7IH-01A	58 years, male, asian, stage:Stage IIIA, alive, 365 days	6556.5
TCGA-XR-A8TC-01A	43 years, female, white, stage:Stage I, alive, 1339 days	6505.7
TCGA-2Y-A9H9-01A	70 years, male, white, stage:Stage I, alive, 697 days	6502.1
TCGA-BC-A10X-01A	52 years, female, white, stage:Stage IIIA, dead, 770 days	6500.3
TCGA-MI-A75H-01A	77 years, male, white, stage:'--, alive, 747 days	6474.1
TCGA-DD-AADG-01A	70 years, male, asian, stage:Stage IIIA, alive, 1145 days	6473.8
TCGA-G3-A25U-01A	63 years, female, asian, stage:Stage I, alive, 1636 days	6437.8
TCGA-BC-A10Z-01A	62 years, female, white, stage:Stage I, dead, 34 days	6369.5
TCGA-2Y-A9GU-01A	55 years, female, white, stage:Stage I, alive, 1939 days	6358.0
TCGA-ZP-A9CY-01A	66 years, female, white, stage:'--, alive, 782 days	6341.4
TCGA-G3-A5SM-01A	58 years, male, white, stage:Stage II, alive, 520 days	6284.3
TCGA-DD-A73B-01A	72 years, female, white, stage:Stage I, dead, 283 days	6226.4
TCGA-PD-A5DF-01A	58 years, female, white, stage:Stage IIIB, dead, 639 days	6174.1
TCGA-UB-A7ME-01A	51 years, male, asian, stage:Stage I, alive, 486 days	6129.7
TCGA-DD-AACW-01A	43 years, male, asian, stage:Stage I, alive, 1424 days	6072.4
TCGA-ZS-A9CF-01A	64 years, male, white, stage:Stage II, alive, 2412 days	6036.6
TCGA-G3-A6UC-01A	65 years, male, white, stage:Stage IIIB, alive, 671 days	6009.2
TCGA-DD-AAW1-01A	55 years, male, asian, stage:Stage IIIA, alive, 1989 days	5965.7
TCGA-MI-A75E-01A	61 years, male, white, stage:Stage IIIC, alive, 507 days	5960.3
TCGA-DD-AACS-01A	39 years, male, asian, stage:Stage I, alive, 1804 days	5953.4
TCGA-DD-A4NV-01A	61 years, male, white, stage:Stage IIIA, alive, 2398 days	5850.9
TCGA-ZP-A9D0-01A	67 years, female, black or african american, stage:'--, alive, 1091 days	5818.0
TCGA-DD-A1EK-01A	64 years, female, white, stage:Stage IVB, dead, 558 days	5796.9
TCGA-CC-A8HS-01A	18 years, male, asian, stage:Stage IIIC, dead, 300 days	5768.3
TCGA-ZS-A9CG-01A	55 years, male, white, stage:Stage II, alive, 341 days	5750.5
TCGA-2Y-A9GX-01A	68 years, male, white, stage:Stage I, alive, 2442 days	5748.0
TCGA-DD-AAE9-01A	69 years, male, asian, stage:Stage I, alive, 722 days	5732.5
TCGA-QA-A7B7-01A	48 years, male, black or african american, stage:Stage II, alive, 94 days	5642.6
TCGA-K7-A6G5-01A	66 years, male, white, stage:Stage I, alive, 512 days	5640.6
TCGA-KR-A7K8-01A	57 years, male, stage:Stage I, alive, 906 days	5515.6
TCGA-G3-A7M8-01A	31 years, male, asian, stage:Stage I, alive, 430 days	5502.4
TCGA-DD-AAE2-01A	51 years, male, asian, stage:Stage I, alive, 638 days	5474.5
TCGA-2Y-A9GW-01A	64 years, male, white, stage:Stage I, dead, 1271 days	5458.6
TCGA-ES-A2HS-01A	80 years, male, white, stage:Stage I, dead, 688 days	5449.5
TCGA-MI-A75G-01A	63 years, male, white, stage:Stage II, alive, 698 days	5423.0
TCGA-DD-A3A8-01A	75 years, male, white, stage:Stage II, dead, 11 days	5380.2
TCGA-HP-A5MZ-01A	78 years, male, stage:Stage I, dead, 91 days	5349.6
TCGA-DD-AAW2-01A	69 years, male, asian, stage:Stage I, alive, 1855 days	5312.4
TCGA-4R-AA8I-01A	66 years, male, white, stage:Stage II, dead, 262 days	5254.1
TCGA-DD-A4NL-01A	46 years, male, white, stage:Stage I, alive, 1711 days	5213.3
TCGA-DD-AAE7-01A	72 years, male, asian, stage:Stage I, alive, 644 days	5167.9
TCGA-EP-A2KB-01A	46 years, female, white, stage:Stage I, dead, 596 days	5159.6
TCGA-2Y-A9GT-01A	51 years, male, white, stage:Stage I, dead, 1624 days	5142.4
TCGA-3K-AAZ8-01A	65 years, male, black or african american, stage:Stage IIIB, alive, 396 days	5091.9
TCGA-CC-A5UC-01A	63 years, male, asian, stage:Stage IIIA, dead, 347 days	5028.5
TCGA-2Y-A9H5-01A	59 years, female, white, stage:Stage I, dead, 555 days	4987.9
TCGA-5R-AAAM-01A	65 years, female, white, stage:Stage II, dead, 46 days	4882.7
TCGA-DD-AADN-01A	59 years, male, asian, stage:Stage I, alive, 898 days	4880.6
TCGA-DD-AADA-01A	66 years, female, asian, stage:Stage I, alive, 1233 days	4850.6
TCGA-DD-AAD0-01A	73 years, female, asian, stage:Stage I, alive, 137 days	4841.6
TCGA-2Y-A9H6-01A	68 years, female, white, stage:Stage I, alive, 357 days	4760.2
TCGA-G3-A3CH-01A	53 years, male, asian, stage:Stage IIIA, alive, 780 days	4647.6
TCGA-G3-A5SL-01A	70 years, male, white, stage:Stage II, alive, 621 days	4564.8
TCGA-RC-A7SF-01A	66 years, male, asian, stage:Stage I, alive, 579 days	4557.8
TCGA-BC-A10S-01A	81 years, male, white, stage:'--, dead, 1423 days	4557.0
TCGA-G3-A25V-01A	68 years, male, white, stage:Stage I, alive, 860 days	4548.9
TCGA-CC-A7IL-01A	61 years, male, asian, stage:Stage IIIA, dead, 278 days	4539.0
TCGA-G3-AAV2-01A	50 years, male, white, stage:Stage I, alive, 372 days	4505.7
TCGA-DD-A4ND-01A	56 years, female, white, stage:Stage I, alive, 2746 days	4501.9
TCGA-UB-AA0U-01A	60 years, male, white, stage:Stage II, alive, 327 days	4484.9
TCGA-5R-AA1C-01A	57 years, male, white, stage:Stage II, alive, 520 days	4381.1
TCGA-DD-A3A1-01A	65 years, male, stage:Stage IIIA, dead, 233 days	4375.6
TCGA-GJ-A6C0-01A	75 years, female, white, stage:Stage II, dead, 31 days	4350.3
TCGA-DD-A11B-01A	73 years, male, white, stage:Stage I, dead, 14 days	4209.3
TCGA-G3-AAV5-01A	67 years, male, white, stage:Stage II, alive, 354 days	4189.1
TCGA-FV-A496-01A	84 years, female, white, stage:Stage I, alive, 10 days	4166.1
TCGA-LG-A9QD-01A	68 years, male, white, stage:Stage IIIA, alive, 366 days	4135.6
TCGA-ZS-A9CD-01A	73 years, male, white, stage:Stage II, dead, 1386 days	4107.6
TCGA-DD-AAEK-01A	51 years, male, asian, stage:Stage II, alive, 1067 days	4100.5
TCGA-DD-A118-01A	77 years, female, white, stage:Stage II, alive, 3437 days	4065.3
TCGA-DD-A116-01A	68 years, male, asian, stage:Stage IIIA, dead, 1622 days	4051.5
TCGA-G3-A25Z-01A	58 years, male, asian, stage:Stage I, alive, 655 days	4036.5
TCGA-2Y-A9H3-01A	45 years, male, white, stage:Stage II, alive, 1516 days	3975.1
TCGA-EP-A3JL-01A	76 years, male, white, stage:Stage I, alive, 303 days	3969.1
TCGA-DD-AACC-01A	61 years, male, asian, stage:Stage I, dead, 1685 days	3968.3
TCGA-BC-A217-01A	75 years, female, white, stage:Stage II, dead, 1397 days	3955.7
TCGA-KR-A7K0-01A	65 years, male, white, stage:Stage I, dead, 65 days	3894.3
TCGA-G3-AAV4-01A	83 years, female, white, stage:Stage I, dead, 27 days	3893.8
TCGA-WX-AA44-01A	64 years, female, white, stage:Stage I, alive, 615 days	3861.5
TCGA-ED-A7XP-01A	53 years, female, asian, stage:Stage II, alive, 400 days	3856.2
TCGA-DD-AACK-01A	70 years, male, asian, stage:Stage I, alive, 9 days	3854.6
TCGA-MI-A75C-01A	64 years, male, white, stage:Stage I, alive, 291 days	3832.6
TCGA-5C-AAPD-01A	61 years, male, asian, stage:Stage II, alive, 20 days	3808.2
TCGA-DD-AAEE-01A	55 years, male, asian, stage:Stage I, alive, 810 days	3806.5
TCGA-DD-A73F-01A	77 years, female, white, stage:Stage I, alive, 1085 days	3747.7
TCGA-ZP-A9D4-01A	64 years, female, white, stage:'--, alive, 395 days	3729.3
TCGA-DD-A4NE-01A	75 years, female, white, stage:Stage IIIA, dead, 660 days	3720.0
TCGA-DD-A4NR-01A	85 years, female, white, stage:Stage I, dead, 9 days	3707.1
TCGA-DD-A1EI-01A	46 years, male, asian, stage:Stage I, alive, 183 days	3683.0
TCGA-DD-A4NJ-01A	54 years, female, white, stage:Stage II, alive, 928 days	3672.4
TCGA-CC-5258-01A	48 years, male, asian, stage:Stage II, dead, 129 days	3626.7
TCGA-DD-AACN-01A	32 years, male, asian, stage:Stage I, alive, 1302 days	3563.6
TCGA-DD-AADP-01A	45 years, male, asian, stage:Stage I, alive, 458 days	3547.6
TCGA-ZP-A9CZ-01A	72 years, male, asian, stage:'--, alive, 706 days	3543.5
TCGA-ED-A4XI-01A	58 years, male, asian, stage:Stage II, alive, 819 days	3531.4
TCGA-2Y-A9GY-01A	64 years, female, white, stage:Stage II, dead, 757 days	3441.3
TCGA-DD-AADJ-01A	70 years, female, asian, stage:Stage I, alive, 1066 days	3433.9
TCGA-DD-A39V-01A	77 years, male, white, stage:Stage II, dead, 643 days	3341.9
TCGA-CC-A7IF-01A	59 years, male, asian, stage:Stage IIIA, dead, 649 days	3196.5
TCGA-DD-AACY-01A	61 years, male, asian, stage:Stage I, alive, 1450 days	3172.1
TCGA-NI-A8LF-01A	74 years, male, white, stage:Stage I, alive, 799 days	3118.0
TCGA-EP-A3RK-01A	73 years, male, white, stage:Stage IIIA, alive, 363 days	3075.2
TCGA-G3-A25S-01A	64 years, male, white, stage:Stage I, dead, 416 days	2991.3
TCGA-DD-AAE6-01A	59 years, female, asian, stage:Stage I, alive, 141 days	2984.5
TCGA-EP-A2KC-01A	62 years, male, black or african american, stage:Stage I, dead, 19 days	2982.9
TCGA-G3-AAV6-01A	53 years, female, white, stage:Stage IIIA, dead, 65 days	2968.3
TCGA-BC-A216-01A	62 years, female, white, stage:Stage IIIA, alive, 1351 days	2950.8
TCGA-DD-AAVQ-01A	38 years, male, asian, stage:Stage I, alive, 2728 days	2882.0
TCGA-2Y-A9H0-01A	49 years, male, white, stage:Stage IIIA, alive, 3675 days	2855.6
TCGA-DD-AAED-01A	51 years, male, asian, stage:Stage I, alive, 763 days	2834.5
TCGA-DD-A4NS-01A	61 years, female, white, stage:Stage I, dead, 2456 days	2781.7
TCGA-XR-A8TG-01A	58 years, male, white, stage:Stage I, alive, 898 days	2763.9
TCGA-UB-A7MC-01A	59 years, male, white, stage:Stage IIIA, alive, 500 days	2755.8
TCGA-DD-A1EF-01A	57 years, female, white, stage:Stage I, dead, 394 days	2731.1
TCGA-BC-A8YO-01A	66 years, female, white, stage:Stage IIIC, alive, 562 days	2727.6
TCGA-G3-A3CJ-01A	52 years, male, american indian or alaska native, stage:Stage II, alive, 594 days	2694.4
TCGA-DD-A3A2-01A	76 years, female, white, stage:Stage I, dead, 2131 days	2661.6
TCGA-2Y-A9H7-01A	81 years, female, white, stage:Stage I, alive, 1168 days	2655.3
TCGA-BD-A3EP-01A	75 years, female, black or african american, stage:Stage I, alive, 409 days	2632.0
TCGA-DD-A1EJ-01A	71 years, female, white, stage:Stage IIIC, dead, 1005 days	2578.8
TCGA-CC-5259-01A	60 years, female, asian, stage:Stage IIIC, alive, 250 days	2546.1
TCGA-LG-A6GG-01A	79 years, female, white, stage:Stage II, alive, 387 days	2542.1
TCGA-EP-A26S-01A	70 years, male, white, stage:Stage I, alive, 608 days	2532.3
TCGA-CC-A7IE-01A	57 years, male, asian, stage:Stage IIIA, dead, 217 days	2469.0
TCGA-DD-AADO-01A	55 years, male, asian, stage:Stage I, alive, 453 days	2456.9
TCGA-ZP-A9CV-01A	59 years, male, white, stage:'--, dead, 1088 days	2443.7
TCGA-RC-A6M4-01A	74 years, female, white, stage:Stage IIIA, alive, 22 days	2434.1
TCGA-ED-A66X-01A	35 years, male, asian, stage:Stage IIIA, alive, 406 days	2424.3
TCGA-ED-A627-01A	74 years, male, white, stage:Stage I, alive, 423 days	2367.5
TCGA-DD-AAD2-01A	66 years, male, asian, stage:Stage I, alive, 658 days	2339.8
TCGA-BC-A69H-01A	64 years, male, white, stage:Stage II, alive, 444 days	2333.6
TCGA-DD-AADI-01A	43 years, female, asian, stage:Stage I, alive, 1085 days	2307.8
TCGA-DD-A73D-01A	68 years, female, white, stage:Stage II, alive, 693 days	2305.0
TCGA-ED-A8O5-01A	59 years, female, asian, stage:Stage IIIA, alive, 406 days	2301.4
TCGA-CC-A5UE-01A	48 years, male, asian, stage:Stage IIIB, dead, 272 days	2296.0
TCGA-BC-A10W-01A	50 years, male, asian, stage:'--, dead, 91 days	2258.2
TCGA-XR-A8TF-01A	74 years, male, white, stage:Stage I, dead, 693 days	2205.7
TCGA-CC-A9FW-01A	68 years, male, asian, stage:Stage IIIA, alive, 248 days	2189.0
TCGA-DD-AADB-01A	51 years, male, asian, stage:Stage I, alive, 1242 days	2158.3
TCGA-CC-A123-01A	24 years, female, asian, stage:Stage IIIA, alive, 219 days	2061.1
TCGA-RC-A7S9-01A	47 years, female, asian, stage:Stage I, alive, 640 days	2019.3
TCGA-CC-A7IK-01A	59 years, male, asian, stage:Stage IIIA, dead, 262 days	1961.2
TCGA-CC-A8HU-01A	39 years, female, asian, stage:Stage IIIA, dead, 344 days	1864.5
TCGA-FV-A4ZP-01A	78 years, male, white, stage:Stage IIIA, dead, 2486 days	1847.6
TCGA-DD-A3A7-01A	67 years, male, stage:Stage IIIB, dead, 419 days	1833.6
TCGA-DD-AAVU-01A	46 years, male, asian, stage:Stage II, alive, 2202 days	1799.6
TCGA-FV-A23B-01A	70 years, female, white, stage:Stage II, dead, 1852 days	1722.6
TCGA-DD-AACG-01A	52 years, male, asian, stage:Stage II, dead, 469 days	1715.3
TCGA-G3-A7M7-01A	65 years, male, white, stage:Stage I, alive, 361 days	1710.9
TCGA-DD-A39Y-01A	67 years, male, asian, stage:Stage I, dead, 171 days	1687.3
TCGA-DD-A4NH-01A	65 years, female, white, stage:Stage IIIB, alive, 917 days	1674.0
TCGA-G3-A3CK-01A	61 years, male, asian, stage:Stage I, alive, 585 days	1669.8
TCGA-DD-AACZ-01A	63 years, female, asian, stage:Stage I, dead, 171 days	1661.3
TCGA-G3-A25Y-01A	52 years, female, asian, stage:Stage I, dead, 452 days	1602.6
TCGA-DD-AADW-01A	48 years, male, asian, stage:Stage I, alive, 587 days	1595.5
TCGA-CC-5264-01A	71 years, male, asian, stage:Stage IIIA, dead, 102 days	1584.4
TCGA-G3-AAV3-01A	58 years, female, white, stage:Stage II, alive, 412 days	1571.9
TCGA-G3-A5SJ-01A	59 years, male, white, stage:Stage I, alive, 698 days	1495.2
TCGA-DD-A4NF-01A	72 years, male, white, stage:Stage I, alive, 942 days	1488.1
TCGA-DD-A1EL-01A	23 years, male, black or african american, stage:Stage II, dead, 415 days	1480.4
TCGA-DD-A1ED-01A	68 years, male, white, stage:Stage I, alive, 2301 days	1446.3
TCGA-CC-5262-01A	67 years, male, asian, stage:Stage IIIC, dead, 103 days	1438.2
TCGA-RC-A7SH-01A	42 years, male, asian, stage:Stage II, alive, 468 days	1428.6
TCGA-DD-AAVV-01A	56 years, male, asian, stage:Stage II, alive, 2455 days	1425.6
TCGA-G3-AAV1-01A	51 years, male, asian, stage:Stage IIIC, dead, 359 days	1395.0
TCGA-DD-AADC-01A	53 years, male, asian, stage:Stage I, dead, 425 days	1351.4
TCGA-ZP-A9D2-01A	51 years, male, white, stage:'--, dead, 765 days	1272.8
TCGA-DD-A4NP-01A	32 years, male, white, stage:Stage I, alive, 3308 days	1266.8
TCGA-DD-AACL-01A	66 years, female, asian, stage:Stage I, dead, 107 days	1263.9
TCGA-G3-A7M9-01A	70 years, male, white, stage:Stage IIIB, dead, 56 days	1262.4
TCGA-ED-A8O6-01A	50 years, female, asian, stage:Stage IIIA, dead, 56 days	1259.5
TCGA-DD-A3A3-01A	45 years, male, asian, stage:Stage I, dead, 535 days	1237.3
TCGA-CC-A8HT-01A	74 years, male, asian, stage:Stage IIIA, dead, 140 days	1205.7
TCGA-DD-AAD6-01A	66 years, male, asian, stage:Stage IIIA, alive, 672 days	1183.2
TCGA-DD-AAVX-01A	38 years, male, asian, stage:Stage II, alive, 1718 days	1156.9
TCGA-ED-A459-01A	47 years, male, asian, stage:Stage II, alive, 910 days	1091.6
TCGA-DD-A113-01A	55 years, female, white, stage:Stage II, alive, 2425 days	1088.8
TCGA-DD-AACP-01A	64 years, male, asian, stage:Stage I, alive, 415 days	1084.1
TCGA-FV-A3R3-01A	38 years, female, white, stage:Stage I, dead, 366 days	1068.4
TCGA-EP-A2KA-01A	52 years, female, white, stage:Stage IIIA, dead, 627 days	1057.6
TCGA-DD-A1EE-01A	73 years, male, white, stage:Stage IIIA, dead, 349 days	1057.0
TCGA-DD-AADQ-01A	59 years, male, asian, stage:Stage II, alive, 436 days	1022.7
TCGA-GJ-A3OU-01A	59 years, male, white, stage:Stage I, alive, 879 days	1002.5
TCGA-K7-AAU7-01A	61 years, male, white, stage:Stage II, alive, 359 days	1000.0
TCGA-DD-A114-01A	42 years, male, black or african american, stage:Stage II, dead, 1149 days	979.9
TCGA-UB-A7MA-01A	62 years, female, white, stage:Stage II, alive, 848 days	938.9
TCGA-ZP-A9D1-01A	56 years, female, white, stage:'--, alive, 21 days	934.8
TCGA-BC-A3KG-01A	68 years, female, white, stage:Stage II, alive, 680 days	923.7
TCGA-DD-A1EA-01A	68 years, male, asian, stage:Stage II, alive, 2415 days	922.2
TCGA-BC-A10U-01A	69 years, male, white, stage:'--, dead, 837 days	920.3
TCGA-DD-AACB-01A	74 years, female, asian, stage:Stage I, alive, 2324 days	917.8
TCGA-DD-AAVR-01A	44 years, male, asian, stage:Stage I, alive, 2513 days	916.8
TCGA-DD-A73G-01A	73 years, female, white, stage:Stage I, alive, 3478 days	911.3
TCGA-DD-A73E-01A	66 years, male, white, stage:Stage I, alive, 44 days	886.2
TCGA-DD-AAVP-01A	48 years, male, asian, stage:Stage I, alive, 2752 days	874.5
TCGA-FV-A4ZQ-01A	52 years, male, white, stage:Stage I, alive, 12 days	872.2
TCGA-DD-AAD1-01A	51 years, female, asian, stage:Stage I, alive, 564 days	862.3
TCGA-G3-A7M6-01A	60 years, female, white, stage:Stage I, alive, 632 days	858.9
TCGA-RC-A6M6-01A	75 years, male, white, stage:Stage II, alive, 9 days	845.1
TCGA-CC-5261-01A	44 years, male, asian, stage:Stage II, dead, 97 days	838.9
TCGA-DD-A73C-01A	65 years, female, white, stage:Stage IIIA, alive, 701 days	784.0
TCGA-DD-AADD-01A	51 years, male, asian, stage:Stage I, alive, 1231 days	776.4
TCGA-YA-A8S7-01A	68 years, male, white, stage:Stage IIIA, dead, 412 days	766.9
TCGA-CC-A7IG-01A	47 years, male, asian, stage:Stage II, dead, 299 days	766.5
TCGA-DD-AADY-01A	55 years, female, asian, stage:Stage I, alive, 555 days	735.4
TCGA-DD-A39W-01A	29 years, female, white, stage:Stage III, dead, 827 days	731.1
TCGA-KR-A7K7-01A	61 years, female, white, stage:Stage II, alive, 951 days	696.4
TCGA-DD-AACI-01A	69 years, male, asian, stage:Stage II, alive, 1618 days	678.9
TCGA-CC-A3MB-01A	36 years, male, asian, stage:Stage IIIA, dead, 315 days	662.7
TCGA-DD-A4NQ-01A	60 years, male, white, stage:Stage II, dead, 373 days	656.0
TCGA-2Y-A9H2-01A	64 years, female, white, stage:Stage I, alive, 1731 days	655.5
TCGA-RG-A7D4-01A	69 years, male, black or african american, stage:Stage II, alive, 1098 days	649.2
TCGA-DD-AACA-01A	65 years, male, asian, stage:Stage I, alive, 2301 days	635.6
TCGA-UB-A7MF-01A	56 years, male, white, stage:Stage IIIA, dead, 214 days	612.8
TCGA-DD-AACH-01A	69 years, male, asian, stage:Stage II, dead, 195 days	612.6
TCGA-G3-A3CG-01A	80 years, male, white, stage:Stage I, alive, 673 days	602.5
TCGA-WQ-A9G7-01A	71 years, female, white, stage:'--, alive, 30 days	599.5
TCGA-DD-A4NG-01A	77 years, male, white, stage:Stage IIIA, dead, 802 days	597.6
TCGA-CC-A3MA-01A	61 years, male, asian, stage:Stage IIIA, dead, 303 days	588.3
TCGA-BC-A112-01A	80 years, male, white, stage:'--, dead, 153 days	562.4
TCGA-G3-A25T-01A	45 years, female, white, stage:Stage IIIA, alive, 1553 days	528.1
TCGA-DD-A3A9-01A	64 years, female, white, stage:Stage IVB, dead, 931 days	525.7
TCGA-ED-A5KG-01A	60 years, female, asian, stage:Stage II, alive, 854 days	498.3
TCGA-ED-A7PZ-01A	61 years, male, asian, stage:Stage II, alive, 6 days	497.2
TCGA-CC-A7II-01A	54 years, male, asian, stage:Stage IIIA, alive, 399 days	467.5
TCGA-CC-5263-01A	35 years, male, asian, stage:Stage IIIA, dead, 129 days	464.5
TCGA-ED-A97K-01A	54 years, male, asian, stage:Stage IIIA, alive, 6 days	457.1
TCGA-DD-A1EH-01A	23 years, male, white, stage:Stage III, alive, 1495 days	432.5
TCGA-CC-A5UD-01A	45 years, male, asian, stage:Stage IIIA, dead, 304 days	363.0
TCGA-DD-AACD-01A	48 years, male, asian, stage:Stage I, dead, 381 days	351.6
TCGA-DD-AACX-01A	66 years, male, asian, stage:Stage II, alive, 170 days	349.5
TCGA-DD-AAE0-01A	45 years, female, asian, stage:Stage IIIA, alive, 555 days	341.4
TCGA-G3-A25X-01A	73 years, male, asian, stage:Stage II, alive, 1779 days	325.4
TCGA-XR-A8TE-01A	16 years, male, white, stage:Stage IIIA, alive, 925 days	293.6
TCGA-CC-A8HV-01A	51 years, female, asian, stage:Stage II, dead, 279 days	257.5
TCGA-5R-AA1D-01A	17 years, female, white, stage:Stage IIIA, alive, 449 days	219.9
TCGA-DD-A1EB-01A	72 years, female, stage:Stage I, alive, 2017 days	199.5
TCGA-ED-A66Y-01A	51 years, female, asian, stage:Stage IIIA, dead, 296 days	194.6
TCGA-RC-A6M5-01A	20 years, female, white, stage:Stage IVA, alive, 15 days	186.2
TCGA-5C-A9VG-01A	58 years, male, white, stage:Stage II, alive, 328 days	186.1
TCGA-G3-AAV7-01A	38 years, male, asian, stage:Stage II, alive, 361 days	148.3
TCGA-DD-A3A4-01A	37 years, male, white, stage:Stage IIIA, dead, 612 days	146.7
TCGA-BC-A10R-01A	66 years, female, white, stage:'--, dead, 308 days	143.7
TCGA-DD-A39Z-01A	43 years, female, stage:Stage II, dead, 601 days	136.4
TCGA-DD-AAC8-01A	72 years, male, asian, stage:Stage I, dead, 16 days	127.8
TCGA-DD-AA3A-01A	81 years, female, white, stage:Stage I, dead, 410 days	115.8
TCGA-DD-A4NB-01A	25 years, male, white, stage:Stage I, alive, 989 days	106.6
TCGA-ED-A7PX-01A	48 years, female, asian, stage:Stage II, alive, 6 days	95.1
TCGA-DD-AAD5-01A	54 years, male, asian, stage:Stage I, alive, 1345 days	81.8
TCGA-FV-A3I0-01A	76 years, female, white, stage:Stage II, alive, 848 days	47.8
TCGA-DD-A4NA-01A	67 years, female, white, stage:Stage IIIC, alive, 1008 days	46.6
TCGA-CC-A1HT-01A	50 years, male, asian, stage:Stage IIIA, dead, 101 days	45.3
TCGA-CC-5260-01A	61 years, female, asian, stage:Stage IIIC, dead, 87 days	35.7
TCGA-LG-A9QC-01A	48 years, male, white, stage:Stage I, alive, 425 days	23.9
TCGA-ED-A82E-01A	60 years, female, asian, stage:Stage IIIA, alive, 408 days	18.4
TCGA-MR-A8JO-01A	34 years, male, white, stage:Stage I, alive, 330 days	16.2
TCGA-DD-A1EC-01A	20 years, female, white, stage:Stage I, alive, 602 days	15.8
TCGA-DD-A3A6-01A	72 years, female, white, stage:Stage II, dead, 3258 days	9.5
TCGA-BC-A10Q-01A	72 years, female, white, stage:'--, dead, 1135 days	8.7
TCGA-CC-A7IJ-01A	56 years, male, asian, stage:Stage II, alive, 382 days	4.3
TCGA-WX-AA47-01A	33 years, female, white, stage:Stage IIIA, dead, 556 days	1.5
TCGA-CC-A3M9-01A	45 years, male, asian, stage:Stage IIIA, dead, 300 days	1.2
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LIVER HEPATOCELLULAR CARCINOMA (VALIDATION) - Interactive survival scatter plotⁱ

& Survival analysisⁱ

TTR is not prognostic in Liver Hepatocellular Carcinoma (validation)

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 4124.23

Median expressionⁱ : N/A

Median follow up timeⁱ : N/A

P scoreⁱ N/A

5-year survival highⁱ N/A

5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average pTPM

4033.5

Number of samples

231

Samples

Sample	Description	pTPM
DO45111	74 years, male, NA, stage:2, alive, 1590 days	24943.2
DO45169	74 years, male, NA, stage:3, alive, 1350 days	19842.4
DO50808	68 years, male, NA, stage:2, alive, 570 days	19004.3
DO48701	78 years, male, NA, stage:2, alive, 780 days	17893.9
DO48741	64 years, male, NA, stage:3, alive, 240 days	17501.2
DO23541	65 years, male, NA, stage:2, alive, 930 days	14163.9
DO45177	81 years, female, NA, stage:3, alive, 1260 days	13259.5
DO23517	62 years, male, NA, stage:2, alive, 1200 days	13200.3
DO45101	63 years, male, NA, stage:2, alive, 1680 days	12519.0
DO50832	73 years, male, NA, stage:3, alive, 90 days	12157.9
DO45125	58 years, male, NA, stage:3, alive, 1680 days	12071.9
DO23540	73 years, male, NA, stage:1, alive, 750 days	12005.7
DO45171	56 years, male, NA, stage:3, alive, 600 days	11974.4
DO48674	80 years, male, NA, stage:2, alive, 1260 days	11186.1
DO50807	67 years, male, NA, stage:1, alive, 540 days	11146.5
DO45207	68 years, male, NA, stage:1, alive, 1050 days	10724.3
DO50811	62 years, male, NA, stage:1, alive, 450 days	10723.5
DO23528	45 years, female, NA, stage:2, alive, 1020 days	10722.2
DO45109	63 years, male, NA, stage:2, alive, 1590 days	10666.8
DO23534	60 years, male, NA, stage:2, alive, 840 days	10554.8
DO50793	76 years, male, NA, stage:4, alive, 540 days	10270.6
DO50776	75 years, male, NA, stage:1, alive, 690 days	9875.5
DO23552	80 years, female, NA, stage:1, alive, 810 days	9727.7
DO227643	79 years, male, NA, stage:2, alive, 1260 days	9643.7
DO50840	49 years, male, NA, stage:2, alive, 330 days	9239.0
DO50813	56 years, male, NA, stage:2, alive, 420 days	8977.8
DO45127	73 years, male, NA, stage:3, dead, 420 days	8870.6
DO23543	63 years, male, NA, stage:2, alive, 1020 days	8849.5
DO45167	67 years, male, NA, stage:2, dead, 1440 days	8636.8
DO45195	62 years, male, NA, stage:1, alive, 390 days	8557.6
DO45233	83 years, male, NA, stage:3, alive, 900 days	8557.4
DO23544	67 years, male, NA, stage:2, alive, 960 days	8422.0
DO23512	60 years, male, NA, stage:1, alive, 1260 days	8293.7
DO45201	49 years, male, NA, stage:1, alive, 900 days	8291.6
DO45129	61 years, male, NA, stage:3, alive, 1470 days	8232.6
DO50791	79 years, female, NA, stage:1, dead, 480 days	7971.8
DO45137	38 years, male, NA, stage:1, alive, 1320 days	7755.7
DO48742	76 years, male, NA, stage:2, alive, 600 days	7703.7
DO48759	73 years, male, NA, stage:3, alive, 720 days	7388.1
DO45105	61 years, male, NA, stage:1, alive, 1680 days	7374.0
DO45123	78 years, female, NA, stage:2, dead, 570 days	7315.9
DO50804	81 years, male, NA, stage:2, alive, 720 days	7078.9
DO48746	76 years, male, NA, stage:3, alive, 570 days	7029.8
DO45241	49 years, male, NA, stage:1, alive, 1080 days	6865.3
DO45094	76 years, male, NA, stage:3, alive, 1650 days	6771.6
DO50839	47 years, female, NA, stage:3, alive, 330 days	6760.9
DO45179	78 years, female, NA, stage:2, alive, 600 days	6665.0
DO45215	65 years, male, NA, stage:2, alive, 1170 days	6432.7
DO45103	47 years, male, NA, stage:3, alive, 450 days	6429.9
DO48693	71 years, male, NA, stage:2, alive, 900 days	6413.1
DO23532	71 years, female, NA, stage:1, alive, 960 days	6322.4
DO23510	80 years, female, NA, stage:2, alive, 870 days	6311.0
DO45107	63 years, female, NA, stage:2, alive, 1710 days	6078.3
DO48721	58 years, female, NA, stage:1, alive, 900 days	6062.6
DO23531	78 years, female, NA, stage:3, alive, 900 days	6042.2
DO48760	70 years, female, NA, stage:2, alive, 690 days	5938.7
DO48736	76 years, female, NA, stage:1, alive, 600 days	5854.7
DO45229	74 years, male, NA, stage:1, alive, 990 days	5779.8
DO50859	77 years, male, NA, stage:2, alive, 180 days	5716.7
DO45095	66 years, male, NA, stage:2, alive, 1620 days	5655.4
DO45181	84 years, female, NA, stage:2, alive, 1200 days	5579.7
DO23546	63 years, male, NA, stage:2, alive, 1050 days	5517.7
DO50783	62 years, male, NA, stage:3, alive, 480 days	5413.5
DO50817	75 years, male, NA, stage:2, alive, 390 days	5337.5
DO45133	64 years, male, NA, stage:3, dead, 660 days	5256.2
DO23538	67 years, male, NA, stage:2, alive, 450 days	5212.1
DO45175	74 years, male, NA, stage:2, alive, 1140 days	5173.4
DO48761	55 years, male, NA, stage:2, alive, 870 days	4933.7
DO45121	61 years, male, NA, stage:3, alive, 1530 days	4796.2
DO45143	69 years, male, NA, stage:3, alive, 1290 days	4794.1
DO50816	63 years, male, NA, stage:2, alive, 390 days	4701.9
DO48695	77 years, male, NA, stage:2, alive, 720 days	4631.6
DO23551	73 years, male, NA, stage:3, dead, 150 days	4608.0
DO23527	72 years, male, NA, stage:1, alive, 1050 days	4603.6
DO23535	67 years, male, NA, stage:1, alive, 960 days	4425.9
DO48727	81 years, female, NA, stage:2, dead, 390 days	4399.3
DO45261	74 years, male, NA, stage:3, alive, 990 days	4385.4
DO45227	57 years, female, NA, stage:2, alive, 1020 days	4364.2
DO50818	65 years, male, NA, stage:2, alive, 510 days	4343.1
DO45153	77 years, female, NA, stage:2, alive, 1380 days	4336.1
DO45235	68 years, female, NA, stage:1, alive, 900 days	4332.2
DO48677	58 years, male, NA, stage:3, alive, 1140 days	4295.9
DO45223	67 years, male, NA, stage:4, alive, 1020 days	4286.1
DO227801	77 years, female, NA, stage:1, alive, 660 days	4172.8
DO45163	76 years, male, NA, stage:2, alive, 960 days	4161.5
DO45173	63 years, male, NA, stage:3, alive, 1170 days	4152.6
DO45096	69 years, male, NA, stage:2, dead, 1290 days	4095.9
DO23508	79 years, female, NA, stage:2, alive, 390 days	4083.4
DO48712	50 years, male, NA, stage:2, alive, 810 days	4055.5
DO50809	56 years, male, NA, stage:3, dead, 720 days	4016.5
DO45255	81 years, male, NA, stage:3, alive, 720 days	3999.8
DO50798	77 years, male, NA, stage:3, dead, 30 days	3986.1
DO50822	66 years, male, NA, stage:2, alive, 510 days	3929.9
DO48715	58 years, female, NA, stage:2, dead, 690 days	3862.7
DO50850	74 years, male, NA, stage:3, alive, 720 days	3830.6
DO50857	72 years, male, NA, stage:2, alive, 210 days	3795.5
DO23539	77 years, male, NA, stage:1, alive, 1110 days	3704.9
DO45145	78 years, male, NA, stage:3, dead, 60 days	3681.6
DO48700	78 years, female, NA, stage:2, alive, 810 days	3625.3
DO23533	61 years, male, NA, stage:2, alive, 900 days	3612.9
DO48743	69 years, female, NA, stage:2, alive, 570 days	3550.6
DO23542	66 years, male, NA, stage:3, alive, 960 days	3417.6
DO23548	78 years, female, NA, stage:1, alive, 840 days	3320.9
DO50820	77 years, female, NA, stage:3, alive, 510 days	3314.3
DO45225	69 years, male, NA, stage:1, alive, 1050 days	3287.0
DO48672	81 years, male, NA, stage:2, alive, 450 days	3103.8
DO45099	46 years, male, NA, stage:3, alive, 1590 days	3092.4
DO50814	83 years, male, NA, stage:3, alive, 420 days	2992.0
DO48733	72 years, male, NA, stage:2, alive, 600 days	2955.3
DO50800	74 years, male, NA, stage:2, alive, 510 days	2948.1
DO48704	68 years, female, NA, stage:3, alive, 750 days	2944.9
DO45193	68 years, female, NA, stage:4, dead, 120 days	2935.2
DO45165	75 years, male, NA, stage:2, alive, 690 days	2862.2
DO50844	75 years, male, NA, stage:4, alive, 300 days	2831.4
DO45191	61 years, female, NA, stage:2, alive, 1200 days	2806.3
DO50805	72 years, male, NA, stage:2, alive, 690 days	2793.3
DO50829	78 years, male, NA, stage:3, alive, 570 days	2669.9
DO23550	69 years, male, NA, stage:1, alive, 990 days	2669.2
DO23525	71 years, male, NA, stage:4, alive, 1050 days	2544.1
DO50802	49 years, male, NA, stage:2, alive, 930 days	2516.1
DO50774	68 years, female, NA, stage:2, alive, 720 days	2514.6
DO45119	74 years, male, NA, stage:3, dead, 510 days	2461.2
DO45141	73 years, male, NA, stage:2, alive, 1320 days	2461.0
DO45213	58 years, male, NA, stage:1, alive, 1200 days	2446.6
DO23509	60 years, male, NA, stage:3, dead, 780 days	2368.0
DO50787	63 years, male, NA, stage:3, alive, 480 days	2349.3
DO48725	66 years, male, NA, stage:1, alive, 780 days	2302.6
DO45183	72 years, female, NA, stage:2, dead, 570 days	2210.3
DO48706	72 years, male, NA, stage:2, alive, 870 days	2196.1
DO50799	66 years, female, NA, stage:2, alive, 540 days	2177.7
DO45281	83 years, male, NA, stage:4, alive, 750 days	2082.4
DO48732	73 years, male, NA, stage:3, alive, 630 days	2048.4
DO48679	72 years, male, NA, stage:2, alive, 1200 days	1978.6
DO23536	56 years, male, NA, stage:2, alive, 930 days	1962.9
DO45243	74 years, female, NA, stage:3, alive, 930 days	1931.1
DO23545	67 years, male, NA, stage:2, dead, 570 days	1930.3
DO45149	70 years, female, NA, stage:2, alive, 1260 days	1920.1
DO45253	50 years, male, NA, stage:2, alive, 870 days	1888.6
DO50789	73 years, female, NA, stage:2, alive, 570 days	1821.5
DO45231	84 years, male, NA, stage:2, alive, 930 days	1818.2
DO45217	69 years, female, NA, stage:3, dead, 270 days	1817.3
DO45257	46 years, male, NA, stage:3, alive, 810 days	1801.6
DO50785	37 years, male, NA, stage:4, dead, 90 days	1766.1
DO50819	72 years, female, NA, stage:2, alive, 510 days	1747.1
DO45185	89 years, male, NA, stage:2, alive, 600 days	1742.5
DO45139	63 years, male, NA, stage:3, alive, 1320 days	1656.4
DO45187	32 years, female, NA, stage:1, alive, 1260 days	1632.4
DO45093	71 years, male, NA, stage:2, dead, 720 days	1619.5
DO23526	66 years, male, NA, stage:3, alive, 1050 days	1604.5
DO45205	67 years, female, NA, stage:2, dead, 90 days	1561.1
DO45157	62 years, male, NA, stage:2, alive, 1980 days	1540.6
DO50825	70 years, male, NA, stage:2, alive, 390 days	1535.0
DO45091	56 years, male, NA, stage:2, dead, 1320 days	1525.4
DO48697	64 years, female, NA, stage:2, dead, 810 days	1491.6
DO45247	31 years, female, NA, stage:2, alive, 210 days	1485.9
DO23513	76 years, male, NA, stage:3, alive, 1200 days	1483.1
DO45265	73 years, male, NA, stage:3, alive, 1020 days	1465.7
DO23516	69 years, male, NA, stage:3, dead, 20 days	1449.9
DO45161	74 years, male, NA, stage:2, dead, 540 days	1443.3
DO23511	83 years, female, NA, stage:3, dead, 180 days	1442.6
DO45239	42 years, male, NA, stage:2, alive, 870 days	1436.4
DO48757	68 years, female, NA, stage:3, alive, 480 days	1434.3
DO45237	58 years, male, NA, stage:2, alive, 900 days	1429.7
DO45117	73 years, female, NA, stage:2, dead, 1110 days	1421.1
DO50845	72 years, male, NA, stage:3, alive, 210 days	1367.6
DO45269	59 years, male, NA, stage:3, alive, 750 days	1357.4
DO23529	72 years, male, NA, stage:4, alive, 930 days	1330.2
DO23537	79 years, male, NA, stage:2, dead, 900 days	1295.7
DO45219	78 years, male, NA, stage:2, alive, 1080 days	1277.7
DO48751	68 years, male, NA, stage:2, dead, 480 days	1254.4
DO45275	65 years, male, NA, stage:3, dead, 10 days	1224.8
DO45263	67 years, male, NA, stage:3, dead, 270 days	1219.1
DO45197	51 years, male, NA, stage:2, alive, 1170 days	1203.1
DO50806	70 years, male, NA, stage:4, alive, 540 days	1130.7
DO23515	71 years, male, NA, stage:2, alive, 1230 days	1117.2
DO45113	58 years, male, NA, stage:3, alive, 1560 days	1094.8
DO23518	67 years, male, NA, stage:2, alive, 1320 days	1011.0
DO48716	71 years, male, NA, stage:2, alive, 720 days	996.2
DO48730	73 years, female, NA, stage:2, alive, 630 days	988.0
DO45092	62 years, male, NA, stage:4, dead, 1200 days	981.9
DO23521	63 years, male, NA, stage:3, alive, 1110 days	953.9
DO50803	62 years, female, NA, stage:1, alive, 540 days	946.3
DO45273	62 years, male, NA, stage:2, alive, 480 days	918.7
DO48720	62 years, female, NA, stage:2, alive, 570 days	870.5
DO50815	62 years, male, NA, stage:3, alive, 150 days	858.4
DO45251	57 years, female, NA, stage:2, alive, 900 days	820.7
DO23514	64 years, male, NA, stage:2, alive, 1290 days	785.7
DO48728	74 years, female, NA, stage:2, alive, 150 days	767.5
DO45249	57 years, male, NA, stage:1, alive, 630 days	742.3
DO45199	86 years, female, NA, stage:2, alive, 1350 days	740.5
DO48681	57 years, male, NA, stage:2, alive, 900 days	740.1
DO45203	71 years, female, NA, stage:2, alive, 1170 days	729.0
DO45115	81 years, male, NA, stage:2, alive, 840 days	701.2
DO45135	77 years, male, NA, stage:1, alive, 1410 days	697.5
DO45189	85 years, female, NA, stage:2, alive, 1200 days	676.8
DO48737	52 years, male, NA, stage:1, alive, 720 days	661.8
DO48723	73 years, male, NA, stage:1, alive, 600 days	657.2
DO23524	71 years, female, NA, stage:2, alive, 1050 days	645.8
DO45221	75 years, female, NA, stage:4, dead, 390 days	634.0
DO45155	69 years, male, NA, stage:2, alive, 2160 days	556.9
DO48719	80 years, male, NA, stage:2, alive, 690 days	543.7
DO45097	69 years, male, NA, stage:3, alive, 1620 days	461.1
DO50855	47 years, male, NA, stage:2, alive, 570 days	445.2
DO45159	65 years, male, NA, stage:3, alive, 1470 days	423.1
DO23530	53 years, male, NA, stage:4, dead, 180 days	413.0
DO45131	53 years, male, NA, stage:4, dead, 360 days	389.3
DO23547	74 years, male, NA, stage:1, alive, 1020 days	334.0
DO23549	74 years, male, NA, stage:3, alive, 990 days	327.1
DO50778	60 years, male, NA, stage:4, alive, 630 days	258.9
DO45267	73 years, male, NA, stage:3, dead, 570 days	219.5
DO45287	74 years, male, NA, stage:1, alive, 390 days	145.2
DO45303	62 years, female, NA, stage:3, alive, 990 days	132.9
DO48717	54 years, male, NA, stage:4, dead, 180 days	123.4
DO45301	56 years, male, NA, stage:2, dead, 1440 days	107.2
DO45279	67 years, male, NA, stage:3, alive, 1290 days	101.7
DO45209	70 years, male, NA, stage:4, alive, 1350 days	77.6
DO45259	65 years, male, NA, stage:3, alive, 330 days	76.7
DO48682	72 years, female, NA, stage:3, dead, 120 days	65.0
DO45305	66 years, male, NA, stage:4, alive, 300 days	62.3
DO45283	60 years, male, NA, stage:3, alive, 510 days	42.2
DO23519	65 years, male, NA, stage:3, alive, 630 days	30.3
DO48747	62 years, male, NA, stage:3, alive, 540 days	25.3
DO45245	75 years, female, NA, stage:2, dead, 240 days	22.4
DO45297	61 years, female, NA, stage:4, dead, 1260 days	22.2
DO45289	78 years, female, NA, stage:3, alive, 360 days	22.1
DO45277	64 years, male, NA, stage:3, alive, 600 days	14.0
DO23523	52 years, male, NA, stage:3, alive, 1080 days	9.5
DO45307	54 years, female, NA, stage:4, dead, 240 days	5.3
DO45285	59 years, male, NA, stage:3, alive, 480 days	3.6
DO45299	70 years, female, NA, stage:1, alive, 1440 days	2.0
DO45211	76 years, male, NA, stage:3, alive, 240 days	1.9
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LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)

Number of samples

330

Samples

Sample ID	Sample type	nRPX
877	Tumor	2.1
863	Tumor	1.9
785	Tumor	1.2
1045	Tumor	1.1
224	Normal	0.9
713	Tumor	0.9
471	Tumor	0.8
777	Tumor	0.7
192	Normal	0.7
365	Tumor	0.7
425	Tumor	0.7
648	Normal	0.7
884	Normal	0.7
921	Tumor	0.7
461	Tumor	0.6
868	Normal	0.6
424	Normal	0.6
444	Normal	0.6
741	Tumor	0.6
428	Normal	0.6
618	Normal	0.6
647	Tumor	0.6
142	Normal	0.6
1032	Normal	0.5
481	Tumor	0.5
466	Normal	0.5
615	Tumor	0.5
517	Tumor	0.5
665	Tumor	0.5
462	Normal	0.5
964	Normal	0.5
432	Normal	0.5
862	Normal	0.4
221	Tumor	0.4
128	Normal	0.4
487	Tumor	0.4
671	Tumor	0.4
857	Tumor	0.4
641	Tumor	0.4
314	Normal	0.4
975	Tumor	0.4
786	Normal	0.4
1016	Normal	0.4
472	Normal	0.4
1046	Normal	0.4
515	Tumor	0.4
162	Normal	0.4
328	Normal	0.4
746	Normal	0.4
663	Tumor	0.4
628	Normal	0.4
422	Normal	0.4
616	Normal	0.4
363	Tumor	0.4
525	Tumor	0.4
912	Normal	0.4
464	Normal	0.4
563	Tumor	0.4
938	Normal	0.3
196	Normal	0.3
864	Normal	0.3
742	Normal	0.3
982	Normal	0.3
414	Normal	0.3
883	Tumor	0.3
664	Normal	0.3
866	Normal	0.3
375	Tumor	0.3
426	Normal	0.3
484	Normal	0.3
815	Tumor	0.3
148	Normal	0.3
283	Tumor	0.3
922	Normal	0.3
858	Normal	0.3
366	Normal	0.3
636	Normal	0.3
384	Normal	0.3
356	Normal	0.3
572	Normal	0.3
546	Normal	0.3
1041	Tumor	0.3
172	Normal	0.3
186	Normal	0.3
881	Tumor	0.3
743	Tumor	0.3
911	Tumor	0.3
878	Normal	0.3
882	Normal	0.3
494	Normal	0.2
278	Normal	0.2
223	Tumor	0.2
516	Normal	0.2
222	Normal	0.2
394	Normal	0.2
744	Normal	0.2
136	Normal	0.2
534	Normal	0.2
451	Tumor	0.2
354	Normal	0.2
553	Tumor	0.2
568	Normal	0.2
482	Normal	0.2
261	Tumor	0.2
465	Tumor	0.2
376	Normal	0.2
817	Tumor	0.2
824	Normal	0.2
488	Normal	0.2
666	Normal	0.2
137	Tumor	0.2
627	Tumor	0.2
362	Normal	0.2
714	Normal	0.2
672	Normal	0.2
976	Normal	0.2
468	Normal	0.2
388	Normal	0.2
368	Normal	0.2
311	Tumor	0.2
1015	Tumor	0.2
756	Normal	0.2
436	Normal	0.2
132	Normal	0.2
358	Normal	0.2
342	Normal	0.2
446	Normal	0.1
697	Tumor	0.1
327	Tumor	0.1
423	Tumor	0.1
232	Normal	0.1
195	Tumor	0.1
367	Tumor	0.1
421	Tumor	0.1
958	Normal	0.1
526	Normal	0.1
1022	Normal	0.1
391	Tumor	0.1
874	Normal	0.1
474	Normal	0.1
1014	Normal	0.1
695	Tumor	0.1
778	Normal	0.1
483	Tumor	0.1
141	Tumor	0.1
491	Tumor	0.1
723	Tumor	0.1
361	Tumor	0.1
312	Normal	0.1
914	Normal	0.1
818	Normal	0.1
258	Normal	0.1
738	Normal	0.1
126	Normal	0.1
467	Tumor	0.1
412	Normal	0.1
111	Normal	0.1
564	Normal	0.1
1042	Normal	0.1
917	Tumor	0.1
272	Normal	0.1
138	Normal	0.1
968	Normal	0.0
617	Tumor	0.0
518	Normal	0.0
191	Tumor	0.0
716	Normal	0.0
445	Tumor	0.0
571	Tumor	0.0
396	Normal	0.0
332	Normal	0.0
963	Tumor	0.0
867	Tumor	0.0
188	Normal	0.0
574	Normal	0.0
816	Normal	0.0
918	Normal	0.0
262	Normal	0.0
514	Normal	0.0
492	Normal	0.0
413	Tumor	0.0
214	Normal	0.0
954	Normal	0.0
185	Tumor	0.0
573	Tumor	0.0
662	Normal	0.0
392	Normal	-0.1
228	Normal	-0.1
435	Tumor	-0.1
298	Normal	-0.1
146	Normal	-0.1
267	Tumor	-0.1
124	Normal	-0.1
135	Tumor	-0.1
852	Normal	-0.1
926	Normal	-0.1
823	Tumor	-0.1
737	Tumor	-0.1
395	Tumor	-0.1
212	Normal	-0.1
452	Normal	-0.1
967	Tumor	-0.1
545	Tumor	-0.1
696	Normal	-0.1
353	Tumor	-0.1
297	Tumor	-0.1
456	Normal	-0.1
284	Normal	-0.1
448	Normal	-0.1
268	Normal	-0.1
364	Normal	-0.1
1026	Normal	-0.1
161	Tumor	-0.1
478	Normal	-0.1
813	Tumor	-0.2
956	Normal	-0.2
352	Normal	-0.2
722	Normal	-0.2
463	Tumor	-0.2
447	Tumor	-0.2
924	Normal	-0.2
558	Normal	-0.2
455	Tumor	-0.2
343	Tumor	-0.2
913	Tumor	-0.2
1028	Normal	-0.2
916	Normal	-0.2
125	Tumor	-0.2
411	Tumor	-0.2
416	Normal	-0.2
355	Tumor	-0.2
715	Tumor	-0.2
431	Tumor	-0.2
728	Normal	-0.2
112	Tumor	-0.2
386	Normal	-0.2
698	Normal	-0.2
227	Tumor	-0.2
341	Tumor	-0.2
131	Tumor	-0.2
393	Tumor	-0.2
415	Tumor	-0.2
937	Tumor	-0.3
513	Tumor	-0.3
745	Tumor	-0.3
861	Tumor	-0.3
145	Tumor	-0.3
851	Tumor	-0.3
686	Normal	-0.3
873	Tumor	-0.3
427	Tumor	-0.3
147	Tumor	-0.3
383	Tumor	-0.3
217	Tumor	-0.3
114	Normal	-0.3
953	Tumor	-0.3
271	Tumor	-0.3
1025	Tumor	-0.3
642	Normal	-0.3
277	Tumor	-0.3
952	Normal	-0.3
187	Tumor	-0.4
313	Tumor	-0.4
944	Normal	-0.4
1031	Tumor	-0.4
127	Tumor	-0.4
981	Tumor	-0.4
528	Normal	-0.4
567	Tumor	-0.4
286	Normal	-0.4
113	Tumor	-0.4
443	Tumor	-0.4
814	Normal	-0.4
983	Tumor	-0.4
685	Tumor	-0.4
554	Normal	-0.4
978	Normal	-0.4
925	Tumor	-0.4
493	Tumor	-0.5
285	Tumor	-0.5
218	Normal	-0.5
213	Tumor	-0.5
387	Tumor	-0.5
951	Tumor	-0.5
755	Tumor	-0.5
984	Normal	-0.5
1027	Tumor	-0.5
915	Tumor	-0.5
635	Tumor	-0.5
977	Tumor	-0.5
527	Tumor	-0.5
171	Tumor	-0.6
351	Tumor	-0.6
1021	Tumor	-0.6
434	Normal	-0.6
344	Normal	-0.6
498	Normal	-0.6
1013	Tumor	-0.6
433	Tumor	-0.6
331	Tumor	-0.6
557	Tumor	-0.6
966	Normal	-0.6
724	Normal	-0.6
721	Tumor	-0.7
1044	Normal	-0.7
123	Tumor	-0.7
257	Tumor	-0.7
535	Tumor	-0.7
357	Tumor	-0.7
536	Normal	-0.7
211	Tumor	-0.7
923	Tumor	-0.7
385	Tumor	-0.7
477	Tumor	-0.8
538	Normal	-0.8
955	Tumor	-0.8
661	Tumor	-0.8
533	Tumor	-0.8
943	Tumor	-0.8
865	Tumor	-0.9
473	Tumor	-0.9
727	Tumor	-0.9
1043	Tumor	-1.1
231	Tumor	-1.1
524	Normal	-1.1
957	Tumor	-1.1
965	Tumor	-1.2
497	Tumor	-1.4
523	Tumor	-1.4
537	Tumor	-1.5
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LIVER CANCER - Protein expressionⁱ A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here. Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

Antibody stainingⁱ Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.	Antibody HPA002550	Antibody CAB002517	Antibody CAB062567	Antibody CAB073406
Staining
High
Medium
Low
Not detected
Intensity
Strong
Moderate
Weak
Negative
Quantity
>75%
75%-25%
<25%
None
Location
Nuclear
Cytoplasmic/membranous
Cytoplasmic/membranous,nuclear
None
Carcinoma, Hepatocellular, NOS
Cholangiocarcinoma