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TISSUE PRIMARY DATA LIVER Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Liver
Tissue proteome
Liver
LIVER - Expression summary
Protein expression
Liveri

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Cholangiocytes: Not detected
Hepatocytes: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:147.4 nTPM
HPA:147.4 nTPM
GTEx:124.8 nTPM
FANTOM5:42.8 Scaled Tags Per Million

LIVER - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA013386
Cholangiocytes Not detected
Hepatocytes Medium



LIVER - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

147.4
N/A
Female, age 60
Liver sample 21
nTPM: 164.5
overview
Male, age 54
Liver sample 23
nTPM: 146.9
Cell types%
Hepatocytes:
80

Fibroblasts:
15

Other cell types:
5

overview
Male, age 74
Liver sample 24
nTPM: 146.2
Cell types%
Hepatocytes:
85

Fibroblasts:
5

Other cell types:
10

overview
Female, age 62
Liver sample 350
nTPM: 144.7
Cell types%
Hepatocytes:
70

Fibroblasts:
10

Other cell types:
20

overview
Male, age 78
Liver sample 351
nTPM: 169.6
Cell types%
Hepatocytes:
75

Fibroblasts:
5

Other cell types:
20

overview
Male, age 53
Liver sample 352
nTPM: 136.8
Cell types%
Hepatocytes:
80

Fibroblasts:
5

Other cell types:
15

overview
Male, age 77
Liver sample 353
nTPM: 152.5
Cell types%
Hepatocytes:
75

Fibroblasts:
5

Other cell types:
20

overview
Female, age 72
Liver sample 359
nTPM: 133.5
Cell types%
Hepatocytes:
50

Fibroblasts:
10

Other cell types:
40

overview
Male, age 70
Liver sample 367
nTPM: 148
Cell types%
Hepatocytes:
65

Fibroblasts:
10

Other cell types:
25

overview
Female, age 23
Liver sample 396
nTPM: 130.9
Cell types%
Hepatocytes:
70

Fibroblasts:
5

Other cell types:
25


LIVER - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

124.8
GTEx sample id Sample description nTPM
Liver
Average nTPM: 124.8
Samples: 226

Max nTPM: 291.9
Min nTPM: 41.2
Std nTPM: 48.2
Median nTPM: 117.4
GTEX-U3ZN-0226-SM-3DB8D 30-39 years, female 291.9
GTEX-132NY-0926-SM-5P9G3 60-69 years, male 285.2
GTEX-U8XE-1526-SM-4E3HT 30-39 years, male 255.6
GTEX-TKQ2-1726-SM-4DXUP 50-59 years, male 252.2
GTEX-XXEK-1126-SM-4BRUX 50-59 years, male 245.7
GTEX-O5YV-0726-SM-EV798 60-69 years, female 240.3
GTEX-144GM-1326-SM-5LU5E 20-29 years, male 236.6
GTEX-1CB4J-0726-SM-7IGN8 60-69 years, male 228.2
GTEX-REY6-1226-SM-48FDR 60-69 years, male 225.9
GTEX-1KD5A-1226-SM-CXZK7 50-59 years, male 219.8
GTEX-131XE-0326-SM-5LZVO 50-59 years, male 218.7
GTEX-S33H-1626-SM-4AD68 30-39 years, male 217.6
GTEX-1AX8Z-1026-SM-7189R 60-69 years, male 216.6
GTEX-14XAO-0226-SM-68728 60-69 years, female 213.4
GTEX-1QP66-0226-SM-DPRXS 50-59 years, male 208.4
GTEX-148VI-0626-SM-5TDDH 60-69 years, female 201.9
GTEX-S32W-1926-SM-4AD63 50-59 years, female 200.7
GTEX-12WSL-0226-SM-5CVMJ 50-59 years, male 198.5
GTEX-1LH75-0926-SM-EAZ5C 50-59 years, female 194.1
GTEX-X3Y1-2726-SM-4PQZH 40-49 years, male 193.9
GTEX-P78B-1326-SM-3P611 40-49 years, female 193.3
GTEX-18D9B-1526-SM-7KFRK 60-69 years, male 192.4
GTEX-Y5LM-0426-SM-4VBRO 40-49 years, female 190.7
GTEX-QEL4-1226-SM-447A4 50-59 years, male 188.5
GTEX-1JJ6O-0826-SM-CXZJL 60-69 years, male 188.4
GTEX-ZPU1-0826-SM-57WG2 40-49 years, male 186.4
GTEX-1QCLZ-1226-SM-EAZ49 60-69 years, female 186.1
GTEX-13NZ9-1326-SM-5MR3V 50-59 years, male 184.5
GTEX-12696-0826-SM-5EGGE 60-69 years, male 181.8
GTEX-VUSG-0126-SM-4KL1X 50-59 years, male 181.1
GTEX-146FH-1526-SM-5NQBU 50-59 years, female 180.5
GTEX-1HCU7-1726-SM-B2LX9 50-59 years, male 179.7
GTEX-RM2N-1926-SM-48FCU 50-59 years, male 179.3
GTEX-1S5VW-1826-SM-EAZ53 60-69 years, male 179.3
GTEX-18A66-2026-SM-7189C 60-69 years, male 178.9
GTEX-13PVR-0126-SM-5S2PY 60-69 years, female 178.4
GTEX-WQUQ-1926-SM-4OOSA 60-69 years, male 177.6
GTEX-14C38-1526-SM-5RQJ7 50-59 years, male 176.6
GTEX-1K9T9-0726-SM-CXZJZ 50-59 years, female 175.0
GTEX-1EH9U-1126-SM-7IGLU 60-69 years, male 172.4
GTEX-WY7C-0726-SM-4ONCB 50-59 years, male 170.1
GTEX-YEC4-0826-SM-5P9FV 40-49 years, male 166.2
GTEX-Z9EW-0426-SM-5CVM9 40-49 years, male 165.1
GTEX-1GN2E-0926-SM-9WPOH 60-69 years, male 164.1
GTEX-11TT1-1726-SM-5EQLJ 20-29 years, male 163.7
GTEX-139YR-0226-SM-5IFEM 50-59 years, male 162.6
GTEX-14E1K-0326-SM-5S2PE 50-59 years, male 162.4
GTEX-1H11D-0826-SM-9OSWB 40-49 years, male 160.6
GTEX-13N2G-0926-SM-5IFGJ 60-69 years, male 160.4
GTEX-1B932-1426-SM-793AN 40-49 years, female 159.7
GTEX-1GF9X-0426-SM-7MKHN 40-49 years, female 158.7
GTEX-1B996-1426-SM-7EPIA 60-69 years, male 158.2
GTEX-ZF29-2026-SM-DNZYW 60-69 years, female 157.9
GTEX-QDVN-0826-SM-48TZ2 50-59 years, male 157.5
GTEX-Y5V5-0926-SM-4VBPZ 60-69 years, female 157.1
GTEX-ZTPG-1426-SM-51MT3 20-29 years, female 155.4
GTEX-X261-1726-SM-4PQYT 50-59 years, male 153.8
GTEX-132AR-0426-SM-5IFH8 50-59 years, female 152.0
GTEX-Q734-0326-SM-48U15 40-49 years, female 150.7
GTEX-145MO-2326-SM-5NQ9K 60-69 years, male 149.8
GTEX-147JS-1126-SM-5RQIW 60-69 years, male 149.7
GTEX-RU72-1426-SM-46MUF 50-59 years, female 149.3
GTEX-1BAJH-1526-SM-7RHGI 70-79 years, male 146.9
GTEX-1GZ4I-1526-SM-9OSW9 50-59 years, male 146.7
GTEX-WFON-1726-SM-4LVMQ 40-49 years, male 146.3
GTEX-UPK5-1426-SM-4JBHH 40-49 years, male 145.1
GTEX-14753-1626-SM-5NQ9L 60-69 years, male 144.7
GTEX-15RJ7-2026-SM-6LPJ4 40-49 years, male 144.5
GTEX-14BIL-1326-SM-79OMR 50-59 years, male 144.0
GTEX-YB5E-0326-SM-5IFHU 40-49 years, male 143.3
GTEX-1GN73-1126-SM-9OSW5 60-69 years, male 142.6
GTEX-13PVQ-1526-SM-5IFEQ 50-59 years, male 141.4
GTEX-YFC4-1526-SM-5IFJS 40-49 years, female 141.3
GTEX-145MF-0826-SM-5QGQA 50-59 years, male 140.3
GTEX-1ICG6-1026-SM-B2LY6 70-79 years, female 140.2
GTEX-1KAFJ-0726-SM-CXZKF 50-59 years, male 139.8
GTEX-X4XY-1626-SM-46MVN 60-69 years, male 138.6
GTEX-139TS-1426-SM-5IFJD 60-69 years, male 138.5
GTEX-14AS3-0126-SM-5Q5F4 40-49 years, female 135.8
GTEX-1AMFI-0826-SM-731DV 50-59 years, female 135.6
GTEX-13FTW-1126-SM-5J2NV 40-49 years, male 135.4
GTEX-S4Z8-0526-SM-4AD4T 60-69 years, male 134.1
GTEX-P44G-1126-SM-3NM9D 30-39 years, male 133.7
GTEX-1B8L1-0726-SM-7P8RT 60-69 years, male 133.6
GTEX-1B8SG-1326-SM-79ONT 50-59 years, male 132.7
GTEX-139TU-0826-SM-5IJFG 60-69 years, male 132.1
GTEX-ZZPU-0426-SM-5GZYH 50-59 years, female 131.8
GTEX-QEG4-1826-SM-CKZN9 30-39 years, male 130.4
GTEX-1CB4F-1726-SM-7MGXH 60-69 years, male 128.7
GTEX-RTLS-1326-SM-46MUN 60-69 years, female 128.6
GTEX-1399R-1226-SM-5P9GF 30-39 years, male 128.5
GTEX-13FLV-0326-SM-5N9DJ 50-59 years, male 127.9
GTEX-R53T-0326-SM-48FEC 50-59 years, female 127.9
GTEX-12KS4-1326-SM-5LUB3 30-39 years, male 127.7
GTEX-ZVP2-0626-SM-51MSO 50-59 years, male 126.5
GTEX-11WQC-0726-SM-5EQMR 60-69 years, male 126.1
GTEX-17HII-1026-SM-7IGLY 50-59 years, male 123.9
GTEX-18A6Q-2026-SM-718AQ 60-69 years, male 122.3
GTEX-O5YT-0826-SM-3TW8N 20-29 years, male 122.2
GTEX-11ZVC-0726-SM-5FQT9 50-59 years, female 122.0
GTEX-ZEX8-0826-SM-4WKHK 50-59 years, male 121.3
GTEX-11TUW-1726-SM-5BC5C 60-69 years, male 121.2
GTEX-1QPFJ-1126-SM-E9U5V 30-39 years, female 121.2
GTEX-12WSM-0726-SM-5GCOW 60-69 years, male 121.1
GTEX-PX3G-0826-SM-48TZS 20-29 years, female 120.8
GTEX-11EQ9-0526-SM-5A5JZ 30-39 years, male 120.7
GTEX-12WSG-0626-SM-5FQTQ 50-59 years, female 120.1
GTEX-1IKK5-0326-SM-C1YPY 60-69 years, male 120.1
GTEX-17EVP-1026-SM-7IGOZ 40-49 years, male 119.7
GTEX-13NZB-0626-SM-5IFH6 30-39 years, male 119.0
GTEX-1QP6S-1326-SM-DPRZ8 40-49 years, male 118.7
GTEX-17HGU-1826-SM-7IGQM 50-59 years, male 117.8
GTEX-1IKJJ-1526-SM-C1YSC 60-69 years, male 117.8
GTEX-1ICLY-1526-SM-C1YS4 50-59 years, male 117.0
GTEX-QV44-0326-SM-C1YQX 50-59 years, male 116.9
GTEX-13O1R-2026-SM-5KM3N 60-69 years, male 116.5
GTEX-1LGRB-0626-SM-CNNQH 50-59 years, female 115.9
GTEX-14E7W-1526-SM-6871X 70-79 years, male 115.1
GTEX-ZAB5-0426-SM-5CVMI 50-59 years, male 114.6
GTEX-1JJEA-1526-SM-CNNPK 60-69 years, male 113.8
GTEX-14JG1-1626-SM-664NH 40-49 years, male 113.3
GTEX-OIZF-0826-SM-3MJGO 60-69 years, male 113.0
GTEX-1R9JW-0826-SM-DPRZJ 30-39 years, female 112.1
GTEX-14A5I-1726-SM-5QGQ5 50-59 years, female 111.8
GTEX-13SLX-1226-SM-5S2Q6 50-59 years, female 111.1
GTEX-18A7A-1526-SM-72D69 50-59 years, female 110.9
GTEX-1EWIQ-0726-SM-7MKFW 70-79 years, female 110.8
GTEX-1399T-0826-SM-5IFES 60-69 years, male 110.5
GTEX-1212Z-0226-SM-59HLF 60-69 years, male 110.3
GTEX-WYVS-1926-SM-4PQZ2 40-49 years, female 109.5
GTEX-1A8G7-1126-SM-731ED 60-69 years, male 109.3
GTEX-1PIIG-1326-SM-EXOIR 30-39 years, male 109.3
GTEX-147F4-1426-SM-5LUA8 50-59 years, male 108.9
GTEX-1HB9E-0626-SM-AHZ4K 50-59 years, male 107.7
GTEX-13QJC-0726-SM-5RQJK 60-69 years, female 107.3
GTEX-OOBJ-0826-SM-3NB2K 60-69 years, male 107.1
GTEX-1CAMQ-1426-SM-7MKFL 40-49 years, male 106.8
GTEX-ZYY3-0626-SM-5NQ6W 60-69 years, female 106.8
GTEX-ZYT6-0626-SM-5E45V 30-39 years, male 105.6
GTEX-13FTZ-0726-SM-5IFFY 60-69 years, male 105.4
GTEX-1E2YA-1226-SM-7MGY3 50-59 years, male 105.4
GTEX-1EKGG-1226-SM-7IGNO 60-69 years, male 105.1
GTEX-1JMLX-1326-SM-CXZJO 50-59 years, male 105.0
GTEX-1NV8Z-1626-SM-DPRYT 60-69 years, male 104.4
GTEX-1269C-0626-SM-5FQSS 60-69 years, female 104.2
GTEX-ZF2S-3026-SM-4WWCH 50-59 years, female 100.9
GTEX-1A32A-0826-SM-72D5C 50-59 years, female 100.3
GTEX-1EN7A-2026-SM-7MGY4 40-49 years, male 98.2
GTEX-14PHX-0526-SM-664NW 50-59 years, male 97.8
GTEX-11DXY-0526-SM-5EGGQ 60-69 years, male 97.2
GTEX-14DAQ-1726-SM-5S2R2 60-69 years, female 96.5
GTEX-QESD-2026-SM-447BI 20-29 years, male 96.2
GTEX-1GF9W-0826-SM-7MKHI 60-69 years, male 95.5
GTEX-17HHE-0126-SM-79398 50-59 years, male 94.9
GTEX-1GF9V-1226-SM-7MKGY 60-69 years, male 94.8
GTEX-13113-1326-SM-5GCOI 60-69 years, female 93.5
GTEX-11ZTS-1426-SM-5EQMM 60-69 years, female 93.4
GTEX-1HBPH-2626-SM-A96TV 40-49 years, female 92.7
GTEX-1HBPI-1026-SM-AHZ4N 50-59 years, male 92.3
GTEX-1J8EW-1626-SM-C1YQ8 60-69 years, female 92.0
GTEX-11OF3-0726-SM-5BC4Z 60-69 years, male 91.8
GTEX-13NYB-1026-SM-5IFH3 40-49 years, male 90.0
GTEX-X4EO-1126-SM-4QARQ 60-69 years, female 89.8
GTEX-YECK-1926-SM-4W21H 60-69 years, male 89.8
GTEX-13112-1426-SM-5EGH8 50-59 years, male 89.7
GTEX-ZVT4-0626-SM-5E45T 50-59 years, female 89.5
GTEX-12WSD-1426-SM-5GCN9 60-69 years, female 89.4
GTEX-RWSA-1426-SM-47JXA 40-49 years, male 89.1
GTEX-144GL-1426-SM-79OMA 50-59 years, male 89.0
GTEX-1HT8W-0826-SM-C1YRJ 30-39 years, male 88.1
GTEX-1I1HK-1126-SM-AHZ2L 60-69 years, male 88.1
GTEX-1KANB-2226-SM-DHXJW 50-59 years, male 87.7
GTEX-11DXZ-0126-SM-5EGGY 50-59 years, male 87.6
GTEX-13OW6-2626-SM-5IFF2 50-59 years, male 86.1
GTEX-15DYW-1326-SM-6LPIV 60-69 years, female 85.7
GTEX-WZTO-0626-SM-4PQYY 40-49 years, male 83.8
GTEX-15SZO-1226-SM-6LPIP 50-59 years, male 82.5
GTEX-1497J-0726-SM-5Q5D1 60-69 years, male 82.0
GTEX-Q2AG-1126-SM-48U1P 40-49 years, female 82.0
GTEX-1KWVE-0326-SM-EV7AF 30-39 years, male 81.9
GTEX-WVLH-2126-SM-EYYWD 50-59 years, male 81.9
GTEX-Y111-0726-SM-EYYVM 50-59 years, male 80.4
GTEX-UTHO-2426-SM-4JBHD 60-69 years, male 80.1
GTEX-18465-1626-SM-7LG6N 50-59 years, male 79.6
GTEX-SJXC-1226-SM-4DM78 60-69 years, male 79.5
GTEX-13VXU-0926-SM-5IFFH 50-59 years, male 79.2
GTEX-131YS-1626-SM-5HL6C 60-69 years, female 78.3
GTEX-1A8FM-1226-SM-7IGMD 50-59 years, female 78.0
GTEX-12WSI-0226-SM-5GCNA 50-59 years, male 77.9
GTEX-1AX9I-1626-SM-72D5D 60-69 years, male 77.2
GTEX-1GN1U-0926-SM-9WPPY 50-59 years, female 77.2
GTEX-131XH-0626-SM-5LZWH 50-59 years, male 77.1
GTEX-147GR-1326-SM-7IGLB 60-69 years, male 76.4
GTEX-1MJIX-0726-SM-DPRYP 40-49 years, male 75.4
GTEX-11NUK-1226-SM-5P9GM 50-59 years, male 75.1
GTEX-17MF6-1126-SM-7DUFS 40-49 years, male 74.4
GTEX-17F96-1226-SM-79OK2 70-79 years, male 73.2
GTEX-15ER7-1826-SM-6LLI7 20-29 years, female 73.1
GTEX-15SHU-1826-SM-7KUKS 40-49 years, female 72.9
GTEX-13O3O-1826-SM-5IFGW 60-69 years, female 72.6
GTEX-T6MN-1226-SM-3NMA5 50-59 years, male 72.6
GTEX-1F75A-1626-SM-9JGGT 50-59 years, male 72.2
GTEX-1PBJJ-0626-SM-DPRYO 30-39 years, male 72.1
GTEX-ZVT3-1626-SM-5GU66 60-69 years, female 71.4
GTEX-1C6VQ-1626-SM-79OO1 50-59 years, male 70.8
GTEX-11NV4-1326-SM-5HL6V 60-69 years, male 70.1
GTEX-11GSP-0626-SM-5986T 60-69 years, female 68.4
GTEX-1B933-1226-SM-731DW 50-59 years, female 67.9
GTEX-11ZUS-2526-SM-59872 30-39 years, male 67.5
GTEX-XBEC-1526-SM-4AT68 50-59 years, male 66.8
GTEX-1HCVE-1526-SM-B2LWW 50-59 years, male 64.6
GTEX-15RJE-1126-SM-6LPI5 40-49 years, male 63.7
GTEX-14PJO-1726-SM-68719 60-69 years, male 63.5
GTEX-1RQEC-1126-SM-EAZ5E 60-69 years, male 61.7
GTEX-13X6J-1826-SM-5TDCT 50-59 years, male 60.0
GTEX-X4EP-1026-SM-4QAS5 60-69 years, female 57.1
GTEX-13N11-0926-SM-5IJG2 50-59 years, female 56.5
GTEX-RNOR-1426-SM-48FDJ 50-59 years, female 56.1
GTEX-RN64-1826-SM-48FDV 50-59 years, male 56.0
GTEX-1KD4Q-1526-SM-D4P3L 40-49 years, male 55.1
GTEX-1I1GR-1526-SM-CNNQE 60-69 years, male 53.6
GTEX-145LU-1326-SM-5LU9N 50-59 years, male 52.8
GTEX-ZAB4-0826-SM-5LU9D 40-49 years, male 51.7
GTEX-1S82Y-1026-SM-EV7BJ 40-49 years, male 49.8
GTEX-WK11-1326-SM-4OOSI 50-59 years, male 44.6
GTEX-12ZZZ-1326-SM-59HKW 60-69 years, male 41.2
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LIVER - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

42.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Liver
Scaled Tags Per Million: 42.8
FF:10018-101C9 64,69,70 years, mixed 42.8

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