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DENND1A
HPA
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  • SUMMARY

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  • BRAIN

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  • DENND1A
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

DENND1A
Synonyms FAM31A, FLJ21129, KIAA1608
Gene descriptioni

Full gene name according to HGNC.

DENN domain containing 1A
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Plasma proteins
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane, Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 9
Cytoband q33.3
Chromosome location (bp) 123379654 - 123930152
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

4
Ensembl ENSG00000119522 (version 109)
Entrez gene 57706
HGNC HGNC:29324
UniProt Q8TEH3 (UniProt - Evidence at protein level)
neXtProt NX_Q8TEH3
GeneCards DENND1A
Antibodypedia DENND1A antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Guanine nucleotide exchange factor (GEF) regulating clathrin-mediated endocytosis through RAB35 activation. Promotes the exchange of GDP to GTP, converting inactive GDP-bound RAB35 into its active GTP-bound form. Regulates clathrin-mediated endocytosis of synaptic vesicles and mediates exit from early endosomes 1, 2. Binds phosphatidylinositol-phosphates (PtdInsPs), with some preference for PtdIns(3)P (By similarity).... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Guanine-nucleotide releasing factor
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Protein transport, Transport
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

Lipid-binding
Gene summary (Entrez)i

Useful information about the gene from Entrez

Clathrin (see MIM 118955)-mediated endocytosis is a major mechanism for internalization of proteins and lipids. Members of the connecdenn family, such as DENND1A, function as guanine nucleotide exchange factors (GEFs) for the early endosomal small GTPase RAB35 (MIM 604199) and bind to clathrin and clathrin adaptor protein-2 (AP2; see MIM 601024). Thus, connecdenns link RAB35 activation with the clathrin machinery (Marat and McPherson, 2010).[supplied by OMIM, Nov 2010]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
DENND1A-201
ENSP00000362720
ENST00000373618
Q8TEH3
[Direct mapping] DENN domain-containing protein 1A
Show all
   MEMSAT-SVM predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Disease related genes
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005085 [guanyl-nucleotide exchange factor activity]
GO:0005829 [cytosol]
GO:0005886 [plasma membrane]
GO:0006897 [endocytosis]
GO:0008289 [lipid binding]
GO:0015031 [protein transport]
GO:0016020 [membrane]
GO:0030136 [clathrin-coated vesicle]
GO:0030665 [clathrin-coated vesicle membrane]
GO:0031410 [cytoplasmic vesicle]
GO:0032266 [phosphatidylinositol-3-phosphate binding]
GO:0032456 [endocytic recycling]
GO:0032483 [regulation of Rab protein signal transduction]
GO:0042734 [presynaptic membrane]
GO:0042995 [cell projection]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0045202 [synapse]
GO:1901981 [phosphatidylinositol phosphate binding]
Show all
466 aa
52.9 kDa
No 0
DENND1A-202
ENSP00000362722
ENST00000373620
Q8TEH3
[Direct mapping] DENN domain-containing protein 1A
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Plasma proteins
Disease related genes
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005085 [guanyl-nucleotide exchange factor activity]
GO:0005829 [cytosol]
GO:0005886 [plasma membrane]
GO:0006897 [endocytosis]
GO:0008289 [lipid binding]
GO:0015031 [protein transport]
GO:0016020 [membrane]
GO:0030136 [clathrin-coated vesicle]
GO:0030665 [clathrin-coated vesicle membrane]
GO:0031410 [cytoplasmic vesicle]
GO:0032266 [phosphatidylinositol-3-phosphate binding]
GO:0032456 [endocytic recycling]
GO:0032483 [regulation of Rab protein signal transduction]
GO:0042734 [presynaptic membrane]
GO:0042995 [cell projection]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0045202 [synapse]
GO:1901981 [phosphatidylinositol phosphate binding]
Show all
559 aa
63.4 kDa
No 1
DENND1A-203
ENSP00000362727
ENST00000373624
Q8TEH3
[Direct mapping] DENN domain-containing protein 1A
Show all
   MEMSAT-SVM predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Disease related genes
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005085 [guanyl-nucleotide exchange factor activity]
GO:0005829 [cytosol]
GO:0005886 [plasma membrane]
GO:0006897 [endocytosis]
GO:0008289 [lipid binding]
GO:0015031 [protein transport]
GO:0016020 [membrane]
GO:0030136 [clathrin-coated vesicle]
GO:0030665 [clathrin-coated vesicle membrane]
GO:0031410 [cytoplasmic vesicle]
GO:0032266 [phosphatidylinositol-3-phosphate binding]
GO:0032456 [endocytic recycling]
GO:0032483 [regulation of Rab protein signal transduction]
GO:0042734 [presynaptic membrane]
GO:0042995 [cell projection]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0045202 [synapse]
GO:1901981 [phosphatidylinositol phosphate binding]
Show all
1009 aa
110.6 kDa
No 0
DENND1A-204
ENSP00000377763
ENST00000394215
A0A0A0MS48
[Direct mapping] DENN domain-containing protein 1A
Show all
   MEMSAT-SVM predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005085 [guanyl-nucleotide exchange factor activity]
GO:0005829 [cytosol]
GO:0017124 [SH3 domain binding]
GO:0030136 [clathrin-coated vesicle]
GO:0030425 [dendrite]
GO:0030665 [clathrin-coated vesicle membrane]
GO:0031267 [small GTPase binding]
GO:0031410 [cytoplasmic vesicle]
GO:0032266 [phosphatidylinositol-3-phosphate binding]
GO:0032456 [endocytic recycling]
GO:0043025 [neuronal cell body]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0043547 [positive regulation of GTPase activity]
GO:0045202 [synapse]
GO:0048488 [synaptic vesicle endocytosis]
GO:0098793 [presynapse]
GO:1901981 [phosphatidylinositol phosphate binding]
Show all
1070 aa
117.7 kDa
No 0

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