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CSF3R
HPA
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  • CSF3R
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

CSF3R
Synonyms CD114, GCSFR
Gene descriptioni

Full gene name according to HGNC.

Colony stimulating factor 3 receptor
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Cancer-related genes
CD markers
Disease related genes
FDA approved drug targets
Human disease related genes
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane, Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 1
Cytoband p34.3
Chromosome location (bp) 36466043 - 36483278
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

8
Ensembl ENSG00000119535 (version 109)
Entrez gene 1441
HGNC HGNC:2439
UniProt Q99062 (UniProt - Evidence at protein level)
neXtProt NX_Q99062
GeneCards CSF3R
Antibodypedia CSF3R antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Receptor for granulocyte colony-stimulating factor (CSF3), essential for granulocytic maturation. Plays a crucial role in the proliferation, differentiation and survival of cells along the neutrophilic lineage. In addition it may function in some adhesion or recognition events at the cell surface.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Receptor
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Cell adhesion
Gene summary (Entrez)i

Useful information about the gene from Entrez

The protein encoded by this gene is the receptor for colony stimulating factor 3, a cytokine that controls the production, differentiation, and function of granulocytes. The encoded protein, which is a member of the family of cytokine receptors, may also function in some cell surface adhesion or recognition processes. Alternatively spliced transcript variants have been described. Mutations in this gene are a cause of Kostmann syndrome, also known as severe congenital neutropenia. [provided by RefSeq, Aug 2010]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
CSF3R-201
ENSP00000332180
ENST00000331941
Q99062
[Direct mapping] Granulocyte colony-stimulating factor receptor
Show all
CD markers
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Nonsense Mutations
   COSMIC Missense Mutations
Disease related genes
FDA approved drug targets
   Biotech drugs
Human disease related genes
   Cancers
   Cancers of haematopoietic and lymphoid tissues
   Immune system diseases
   Primary immunodeficiency
Mapped to neXtProt
   neXtProt - Evidence at protein level
   DeepTMHMM predicted membrane proteins
Show all
GO:0004896 [cytokine receptor activity]
GO:0005515 [protein binding]
GO:0005576 [extracellular region]
GO:0005765 [lysosomal membrane]
GO:0005886 [plasma membrane]
GO:0006952 [defense response]
GO:0007155 [cell adhesion]
GO:0007165 [signal transduction]
GO:0009897 [external side of plasma membrane]
GO:0016020 [membrane]
GO:0019221 [cytokine-mediated signaling pathway]
GO:0019955 [cytokine binding]
GO:0030666 [endocytic vesicle membrane]
GO:0038023 [signaling receptor activity]
GO:0043235 [receptor complex]
GO:0051916 [granulocyte colony-stimulating factor binding]
Show all
783 aa
86.6 kDa
Yes 1
CSF3R-202
ENSP00000355406
ENST00000361632
Q99062
[Direct mapping] Granulocyte colony-stimulating factor receptor
Show all
CD markers
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Nonsense Mutations
   COSMIC Missense Mutations
Disease related genes
FDA approved drug targets
   Biotech drugs
Human disease related genes
   Cancers
   Cancers of haematopoietic and lymphoid tissues
   Immune system diseases
   Primary immunodeficiency
Mapped to neXtProt
   neXtProt - Evidence at protein level
   DeepTMHMM predicted membrane proteins
Show all
GO:0004896 [cytokine receptor activity]
GO:0005515 [protein binding]
GO:0005576 [extracellular region]
GO:0005765 [lysosomal membrane]
GO:0005886 [plasma membrane]
GO:0006952 [defense response]
GO:0007155 [cell adhesion]
GO:0007165 [signal transduction]
GO:0009897 [external side of plasma membrane]
GO:0016020 [membrane]
GO:0019221 [cytokine-mediated signaling pathway]
GO:0019955 [cytokine binding]
GO:0030666 [endocytic vesicle membrane]
GO:0038023 [signaling receptor activity]
GO:0043235 [receptor complex]
GO:0051916 [granulocyte colony-stimulating factor binding]
Show all
836 aa
92.2 kDa
Yes 1
CSF3R-203
ENSP00000362195
ENST00000373103
Q99062
[Direct mapping] Granulocyte colony-stimulating factor receptor
Show all
CD markers
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Nonsense Mutations
   COSMIC Missense Mutations
Disease related genes
FDA approved drug targets
   Biotech drugs
Human disease related genes
   Cancers
   Cancers of haematopoietic and lymphoid tissues
   Immune system diseases
   Primary immunodeficiency
Mapped to neXtProt
   neXtProt - Evidence at protein level
   DeepTMHMM predicted membrane proteins
Show all
GO:0004896 [cytokine receptor activity]
GO:0005515 [protein binding]
GO:0005576 [extracellular region]
GO:0005765 [lysosomal membrane]
GO:0005886 [plasma membrane]
GO:0006952 [defense response]
GO:0007155 [cell adhesion]
GO:0007165 [signal transduction]
GO:0009897 [external side of plasma membrane]
GO:0016020 [membrane]
GO:0019221 [cytokine-mediated signaling pathway]
GO:0019955 [cytokine binding]
GO:0030666 [endocytic vesicle membrane]
GO:0038023 [signaling receptor activity]
GO:0043235 [receptor complex]
GO:0051916 [granulocyte colony-stimulating factor binding]
Show all
863 aa
95.1 kDa
Yes 1
CSF3R-204
ENSP00000362196
ENST00000373104
Q99062
[Direct mapping] Granulocyte colony-stimulating factor receptor
Show all
CD markers
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Nonsense Mutations
   COSMIC Missense Mutations
Disease related genes
FDA approved drug targets
   Biotech drugs
Human disease related genes
   Cancers
   Cancers of haematopoietic and lymphoid tissues
   Immune system diseases
   Primary immunodeficiency
Mapped to neXtProt
   neXtProt - Evidence at protein level
   DeepTMHMM predicted membrane proteins
Show all
GO:0004896 [cytokine receptor activity]
GO:0005515 [protein binding]
GO:0005576 [extracellular region]
GO:0005765 [lysosomal membrane]
GO:0005886 [plasma membrane]
GO:0006952 [defense response]
GO:0007155 [cell adhesion]
GO:0007165 [signal transduction]
GO:0009897 [external side of plasma membrane]
GO:0016020 [membrane]
GO:0019221 [cytokine-mediated signaling pathway]
GO:0019955 [cytokine binding]
GO:0030666 [endocytic vesicle membrane]
GO:0038023 [signaling receptor activity]
GO:0043235 [receptor complex]
GO:0051916 [granulocyte colony-stimulating factor binding]
Show all
783 aa
86.6 kDa
Yes 1
CSF3R-205
ENSP00000362198
ENST00000373106
Q99062
[Direct mapping] Granulocyte colony-stimulating factor receptor
Show all
CD markers
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Nonsense Mutations
   COSMIC Missense Mutations
Disease related genes
FDA approved drug targets
   Biotech drugs
Human disease related genes
   Cancers
   Cancers of haematopoietic and lymphoid tissues
   Immune system diseases
   Primary immunodeficiency
Mapped to neXtProt
   neXtProt - Evidence at protein level
   DeepTMHMM predicted membrane proteins
Show all
GO:0004896 [cytokine receptor activity]
GO:0005515 [protein binding]
GO:0005576 [extracellular region]
GO:0005765 [lysosomal membrane]
GO:0005886 [plasma membrane]
GO:0006952 [defense response]
GO:0007155 [cell adhesion]
GO:0007165 [signal transduction]
GO:0009897 [external side of plasma membrane]
GO:0016020 [membrane]
GO:0019221 [cytokine-mediated signaling pathway]
GO:0019955 [cytokine binding]
GO:0030593 [neutrophil chemotaxis]
GO:0030666 [endocytic vesicle membrane]
GO:0038023 [signaling receptor activity]
GO:0043235 [receptor complex]
GO:0045637 [regulation of myeloid cell differentiation]
GO:0051916 [granulocyte colony-stimulating factor binding]
Show all
836 aa
92.2 kDa
Yes 1
CSF3R-207
ENSP00000435218
ENST00000464465
H0YE86
[Direct mapping] Granulocyte colony-stimulating factor receptor
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Nonsense Mutations
   COSMIC Missense Mutations
Human disease related genes
   Cancers
   Cancers of haematopoietic and lymphoid tissues
   Immune system diseases
   Primary immunodeficiency
   DeepTMHMM predicted membrane proteins
Show all
GO:0005515 [protein binding]
GO:0016020 [membrane]
Show all
388 aa
42 kDa
No 1
CSF3R-215
ENSP00000431639
ENST00000533491
E9PK56
[Direct mapping] Granulocyte colony-stimulating factor receptor
Show all
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Nonsense Mutations
   COSMIC Missense Mutations
Human disease related genes
   Cancers
   Cancers of haematopoietic and lymphoid tissues
   Immune system diseases
   Primary immunodeficiency
Show all
21 aa
2.2 kDa
No 0
CSF3R-217
ENSP00000514168
ENST00000699090
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Nonsense Mutations
   COSMIC Missense Mutations
Human disease related genes
   Cancers
   Cancers of haematopoietic and lymphoid tissues
   Immune system diseases
   Primary immunodeficiency
   DeepTMHMM predicted membrane proteins
Show all
GO:0004896 [cytokine receptor activity]
GO:0005515 [protein binding]
GO:0016020 [membrane]
Show all
704 aa
77.8 kDa
No 1

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