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IFI27L2
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TISSUE AMYGDALA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
Dictionary
Tissue proteome
Amygdala
AMYGDALA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:159.0 nTPM
HPA Brain:55.5 nTPM
GTEx:159.0 nTPM
FANTOM5:52.4 Scaled Tags Per Million
Pig:78.2 nTPM

AMYGDALA - Annotated protein expression
Pending normal tissue analysis

AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

55.5
Sample id Sample description nTPM
Amygdala
nTPM: 55.5
2814 Male, age 76, right hemisphere 69.1
1987 Female, age 91, left hemisphere 59.0
2695 Female, age 67, right hemisphere 55.0
2514 Male, age 75, right hemisphere 53.3
2517 Female, age 94, left hemisphere 41.1
Basal amygdala
nTPM: 46.8
2609 Male, age 75, right hemisphere 62.2
1955 Male, age 76, both hemispheres 59.0
2110 Male, age 80, left hemisphere 50.9
2685 Female, age 94, left hemisphere 43.6
2243 Female, age 91, right hemisphere 40.4
2827 Female, age 67, right hemisphere 24.8
Central amygdala
nTPM: 50.2
1905 Male, age 76, both hemispheres 72.6
2826 Female, age 94, left hemisphere 67.4
2515 Male, age 75, right hemisphere 41.9
2239 Male, age 80, left hemisphere 37.5
2701 Female, age 91, right hemisphere 31.5
Corticomedial amygdala
nTPM: 45.6
2428 Male, age 75, right hemisphere 53.1
2240 Male, age 76, both hemispheres 48.9
2429 Female, age 94, left hemisphere 46.7
2829 Male, age 80, left hemisphere 46.6
2242 Female, age 91, right hemisphere 45.3
2535 Female, age 67, right hemisphere 33.1
Lateral amygdala
nTPM: 43.9
1883 Male, age 76, both hemispheres 64.4
2516 Male, age 75, right hemisphere 64.4
2534 Female, age 94, left hemisphere 43.1
2256 Male, age 80, left hemisphere 35.6
2830 Female, age 67, right hemisphere 32.9
2255 Female, age 91, right hemisphere 23.1

AMYGDALA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

159.0
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 159.0
Samples: 152

Max nTPM: 433.8
Min nTPM: 62.5
Std nTPM: 66.8
Median nTPM: 144.7
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 433.8
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 421.0
GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 411.3
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 407.4
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 389.9
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 367.6
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 290.9
GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 274.1
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 253.7
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 252.4
GTEX-13QIC-0011-R4a-SM-5PNX8 60-69 years, female 251.3
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 246.3
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 242.9
GTEX-1CB4G-0011-R4b-SM-CJI28 60-69 years, male 241.5
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 228.1
GTEX-1C6WA-0011-R4a-SM-9QEH2 60-69 years, male 226.7
GTEX-1F7RK-0011-R4b-SM-9QEI7 20-29 years, female 221.7
GTEX-1C6VR-0011-R4b-SM-9QEGZ 60-69 years, male 220.0
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 218.7
GTEX-ZE9C-0011-R4a-SM-4WKH6 60-69 years, male 215.1
GTEX-Y8DK-0011-R4A-SM-EXUR1 60-69 years, male 213.9
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 208.0
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 201.7
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 200.2
GTEX-1ICLZ-0011-R4a-SM-CMKHL 60-69 years, male 198.7
GTEX-1F6IF-0011-R4b-SM-CKZNJ 60-69 years, male 196.1
GTEX-1313W-0011-R4b-SM-5KLZV 50-59 years, female 195.7
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 194.5
GTEX-1HBPI-0011-R4a-SM-CJI3K 50-59 years, male 193.9
GTEX-1GTWX-0011-R4a-SM-C1YQI 60-69 years, male 191.9
GTEX-1JN6P-0011-R4a-SM-EZ6MS 60-69 years, male 191.4
GTEX-13SLX-0011-R4a-SM-5O9BJ 50-59 years, female 190.0
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 189.7
GTEX-1EX96-0011-R4a-SM-ARU82 50-59 years, male 189.7
GTEX-145MI-0011-R4b-SM-5PNZH 60-69 years, female 187.9
GTEX-11PRG-0011-R4a-SM-DNZZR 50-59 years, male 187.5
GTEX-1LSVX-0011-R4b-SM-EXURP 60-69 years, male 186.9
GTEX-1H1CY-0011-R4b-SM-CJI3G 60-69 years, female 186.0
GTEX-11TTK-0011-R4a-SM-DNZZU 60-69 years, female 183.9
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 181.4
GTEX-1JJEA-0011-R4a-SM-EXUTC 60-69 years, male 180.4
GTEX-183WM-0011-R4a-SM-7LG6S 70-79 years, female 179.3
GTEX-1N2EE-0011-R4a-SM-EXOII 60-69 years, male 177.9
GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 177.2
GTEX-13X6J-0011-R4b-SM-5P9K4 50-59 years, male 172.4
GTEX-13N1W-0011-R4a-SM-5MR52 70-79 years, male 170.9
GTEX-1I1GR-0011-R4a-SM-CMKHC 60-69 years, male 169.9
GTEX-ZAK1-0011-R4a-SM-6AJBK 50-59 years, female 169.2
GTEX-1LVAO-0011-R4a-SM-EXURO 60-69 years, male 168.8
GTEX-13CZV-0011-R4b-SM-5J2NY 60-69 years, male 167.3
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 165.1
GTEX-1399T-0011-R4b-SM-5DUVX 60-69 years, male 165.0
GTEX-12WSD-0011-R4b-SM-5LZUA 60-69 years, female 164.8
GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 164.5
GTEX-11NUK-0011-R4a-SM-DO12B 50-59 years, male 163.4
GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 162.8
GTEX-17F97-0011-R4b-SM-7KFS2 50-59 years, male 161.5
GTEX-1H2FU-0011-R4a-SM-CL551 60-69 years, female 159.3
GTEX-1H3O1-0011-R4b-SM-A9SKE 60-69 years, male 158.6
GTEX-11ONC-0011-R4b-SM-DO93H 60-69 years, male 157.0
GTEX-1F48J-0011-R4b-SM-9OSVX 50-59 years, female 155.0
GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 153.3
GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 153.1
GTEX-131YS-0011-R4a-SM-5DUVL 60-69 years, female 152.6
GTEX-1E1VI-0011-R4b-SM-9QEHV 50-59 years, male 151.8
GTEX-13OVH-0011-R4a-SM-5KM3W 70-79 years, male 151.5
GTEX-14PN4-0011-R4a-SM-686ZT 50-59 years, male 149.6
GTEX-13OW8-0011-R4a-SM-9WG6V 60-69 years, male 149.4
GTEX-15CHQ-0011-R4a-SM-686ZX 60-69 years, male 149.3
GTEX-145LS-0011-R4b-SM-5S2UT 60-69 years, female 148.8
GTEX-NL4W-0011-R4a-SM-2I5GZ 50-59 years, male 148.6
GTEX-WVLH-0011-R4A-SM-3MJFS 50-59 years, male 147.6
GTEX-1N2DW-0011-R4b-SM-EZ6MD 50-59 years, male 147.6
GTEX-1J8EW-0011-R4b-SM-ARU89 60-69 years, female 145.7
GTEX-13OVL-0011-R4b-SM-5L3HV 50-59 years, male 145.0
GTEX-X585-0011-R4B-SM-46MVH 50-59 years, male 144.9
GTEX-XLM4-0011-R4B-SM-4AT5C 60-69 years, male 144.5
GTEX-12WSF-0011-R4b-SM-5HL88 70-79 years, male 144.4
GTEX-139T8-0011-R4a-SM-5HL54 60-69 years, male 144.4
GTEX-18464-0011-R4a-SM-7LG6T 50-59 years, male 143.5
GTEX-15ER7-0011-R4a-SM-6M46S 20-29 years, female 143.4
GTEX-NPJ7-0011-R4a-SM-2I3GJ 60-69 years, female 143.4
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 143.1
GTEX-13VXU-0011-R4b-SM-5O9CI 50-59 years, male 142.3
GTEX-14PQA-0011-R4b-SM-6AJBU 50-59 years, female 142.1
GTEX-13RTJ-0011-R4b-SM-5PNX1 60-69 years, male 140.2
GTEX-12ZZZ-0011-R4b-SM-5DUV7 60-69 years, male 139.9
GTEX-13OW6-0011-R4a-SM-5O9DX 50-59 years, male 138.5
GTEX-13O3O-0011-R4b-SM-5KM3F 60-69 years, female 138.1
GTEX-WHSE-0011-R4A-SM-3P5ZN 20-29 years, male 136.2
GTEX-1H23P-0011-R4b-SM-CL54R 60-69 years, male 135.0
GTEX-YFC4-0011-R4a-SM-4RGLQ 40-49 years, female 133.8
GTEX-1A3MX-0011-R4b-SM-7EWFK 60-69 years, male 133.4
GTEX-15DYW-0011-R4a-SM-6M46V 60-69 years, female 132.9
GTEX-14PJM-0011-R4a-SM-5YYAS 50-59 years, female 132.7
GTEX-T5JC-0011-R4A-SM-32PLT 20-29 years, male 132.7
GTEX-1EMGI-0011-R4b-SM-CJI2D 60-69 years, male 132.7
GTEX-1GZ4I-0011-R4a-SM-9QEI9 50-59 years, male 132.3
GTEX-RNOR-0011-R4A-SM-3GAD3 50-59 years, female 132.2
GTEX-1HBPH-0011-R4a-SM-A96RX 40-49 years, female 131.8
GTEX-14BIM-0011-R4b-SM-5S2RK 60-69 years, female 128.7
GTEX-17EVQ-0011-R4b-SM-7LT94 70-79 years, male 128.7
GTEX-15DCD-0011-R4a-SM-69LPB 70-79 years, female 128.3
GTEX-11ZVC-0011-R4a-SM-5BC6Z 50-59 years, female 126.7
GTEX-ZVZQ-0011-R4b-SM-57WCZ 60-69 years, female 125.4
GTEX-15EO6-0011-R4a-SM-7KUKZ 50-59 years, male 125.4
GTEX-1HB9E-0011-R4b-SM-ARZLS 50-59 years, male 125.4
GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 124.2
GTEX-QVJO-0011-R4A-SM-2S1QL 60-69 years, female 123.7
GTEX-NL3H-0011-R4a-SM-2I3GK 60-69 years, male 121.5
GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 119.8
GTEX-1H1DG-0011-R4a-SM-CE6RQ 70-79 years, male 117.8
GTEX-13X6K-0011-R4b-SM-5P9HO 60-69 years, female 116.3
GTEX-13PVQ-0011-R4a-SM-5O9CT 50-59 years, male 115.1
GTEX-13112-0011-R4b-SM-5DUXL 50-59 years, male 113.8
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 113.7
GTEX-1GN73-0011-R4b-SM-9QEIK 60-69 years, male 113.3
GTEX-QVUS-0011-R4A-SM-3GAE7 60-69 years, female 113.0
GTEX-OHPN-0011-R4A-SM-2I5FD 60-69 years, female 112.9
GTEX-N7MS-0011-R4a-SM-2HMKW 60-69 years, male 112.8
GTEX-1J8Q2-0011-R4a-SM-ADEHA 60-69 years, male 111.5
GTEX-14ABY-0011-R4b-SM-5S2VN 50-59 years, male 109.9
GTEX-1445S-0011-R4a-SM-5PNWN 60-69 years, male 108.9
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 106.4
GTEX-144GL-0011-R4a-SM-5PNUI 50-59 years, male 105.4
GTEX-14DAQ-0011-R4a-SM-5YYAI 60-69 years, female 105.1
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 105.0
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 104.2
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 103.9
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 103.4
GTEX-1GMR8-0011-R4a-SM-9OSX1 50-59 years, female 101.8
GTEX-13SLW-0011-R4b-SM-5S2W2 70-79 years, male 100.8
GTEX-1H1ZS-0011-R4b-SM-CKZO7 70-79 years, male 100.6
GTEX-P44G-0011-R4A-SM-2I3FB 30-39 years, male 99.3
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 99.3
GTEX-13N2G-0011-R4b-SM-5MR54 60-69 years, male 98.4
GTEX-P44H-0011-R4A-SM-2XCEW 40-49 years, male 98.1
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 96.3
GTEX-13X6I-0011-R4b-SM-5PNU9 60-69 years, male 94.5
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 94.5
GTEX-N7MT-0011-R4a-SM-2I3G9 60-69 years, female 94.4
GTEX-R55E-0011-R4A-SM-2TC5H 20-29 years, male 93.0
GTEX-1B996-0011-R4b-SM-9OSVO 60-69 years, male 92.4
GTEX-QMR6-0011-R4A-SM-32PKU 50-59 years, male 90.2
GTEX-X4XX-0011-R4B-SM-46MWL 60-69 years, male 87.3
GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 83.7
GTEX-1CB4J-0011-R4b-SM-9WG5P 60-69 years, male 83.1
GTEX-15DDE-0011-R4b-SM-7KULI 50-59 years, female 78.9
GTEX-UTHO-0011-R4A-SM-3GIJP 60-69 years, male 73.9
GTEX-QDT8-0011-R4A-SM-32PKM 30-39 years, female 67.8
GTEX-T6MN-0011-R4A-SM-32QPG 50-59 years, male 63.7
GTEX-X4EP-0011-R4B-SM-3P627 60-69 years, female 62.5
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AMYGDALA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

52.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 52.4
FF:10151-102I7 76 years, female 52.4

AMYGDALA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

78.2
Pig sample Sample description nTPM
Amygdala
nTPM: 78.2
Samples: 4

Max nTPM: 102.2
Min nTPM: 60.7
Sample A Female 102.2
Sample B Female 66.1
Sample C Male 83.8
Sample D Male 60.7

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