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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:100.2 nTPM
HPA Brain:135.4 nTPM
GTEx:100.2 nTPM
FANTOM5:145.4 Scaled Tags Per Million
Pig:68.5 nTPM
Mouse:55.9 nTPM
Allen mouse:4.8 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA000835Antibody CAB032888
Glial cells Not detectedNot detected
Neuronal cells Not detectedLow



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

135.4
Sample id Sample description nTPM
Caudate nucleus
nTPM: 84.2
2481 Female, age 94, left hemisphere 101.7
1857 Female, age 85, left hemisphere 100.0
2846 Female, age 79, unknown 93.2
1854 Male, age 80, left hemisphere 86.2
2290 Female, age 72, unknown 79.2
2288 Male, age 75, left hemisphere 75.5
2289 Male, age 61, right hemisphere 75.0
1781 Male, age 74, unknown 62.9
Globus pallidus, externus
nTPM: 135.4
1996 Male, age 80, right hemisphere 188.5
2395 Male, age 75, both hemispheres 177.5
2772 Female, age 79, unknown 139.0
2646 Male, age 61, right hemisphere 99.9
2567 Female, age 72, unknown 72.3
Globus pallidus, internus
nTPM: 130.8
2037 Male, age 80, right hemisphere 178.9
1818 Male, age 74, unknown 146.9
2778 Female, age 91, both hemispheres 138.5
2111 Female, age 85, right hemisphere 126.6
2483 Female, age 94, right hemisphere 116.0
2566 Female, age 72, unknown 110.7
2287 Male, age 75, right hemisphere 98.3
Nucleus accumbens
nTPM: 80.9
2391 Female, age 94, left hemisphere 103.6
2698 Female, age 72, unknown 99.8
2732 Male, age 80, right hemisphere 91.9
1806 Female, age 85, left hemisphere 85.0
2286 Male, age 75, left hemisphere 77.6
1856 Female, age 91, right hemisphere 70.6
1783 Male, age 74, unknown 63.1
2824 Male, age 61, right hemisphere 55.8
Nucleus basalis of Meynert
nTPM: 90.3
2569 Male, age 61, both hemispheres 107.6
2821 Male, age 75, both hemispheres 99.7
2393 Male, age 80, right hemisphere 80.7
2484 Female, age 94, left hemisphere 73.1
Nucleus of the diagonal band
nTPM: 56.1
1812 Female, age 91, both hemispheres 83.0
2775 Male, age 80, right hemisphere 52.6
1979 Male, age 74, unknown 52.5
2029 Male, age 61, right hemisphere 50.0
2195 Female, age 85, both hemispheres 42.4
Putamen
nTPM: 75.8
2482 Female, age 94, left hemisphere 117.3
1829 Male, age 74, unknown 81.0
1937 Female, age 91, right hemisphere 76.2
2489 Female, age 72, unknown 75.3
2466 Female, age 79, unknown 74.7
1838 Male, age 80, right hemisphere 56.0
2647 Male, age 75, left hemisphere 50.2
Septal nuclei
nTPM: 69.7
2394 Male, age 61, left hemisphere 102.6
2199 Male, age 80, right hemisphere 86.4
2629 Female, age 94, right hemisphere 73.0
2009 Female, age 91, both hemispheres 65.1
2059 Female, age 85, both hemispheres 58.6
2031 Female, age 72, unknown 57.6
1960 Male, age 74, unknown 44.9
Stria terminalis, bed nucleus
nTPM: 54.0
2201 Male, age 74, unknown 58.1
1974 Female, age 91, both hemispheres 56.3
2486 Female, age 94, both hemispheres 47.7

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

100.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 94.4
Samples: 246

Max nTPM: 251.6
Min nTPM: 27.6
Std nTPM: 30.9
Median nTPM: 90.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 251.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 219.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 197.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 190.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 180.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 179.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 179.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 175.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 159.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 155.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 149.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 148.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 148.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 148.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 147.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 141.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 140.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 135.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 135.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 135.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 134.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 129.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 129.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 127.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 127.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 127.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 127.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 126.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 126.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 126.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 125.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 125.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 125.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 125.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 124.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 124.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 124.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 124.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 122.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 121.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 120.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 120.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 120.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 117.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 117.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 116.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 115.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 115.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 115.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 114.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 113.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 113.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 113.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 112.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 111.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 111.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 110.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 110.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 110.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 109.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 109.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 109.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 109.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 109.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 107.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 107.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 107.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 106.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 106.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 105.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 105.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 105.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 104.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 103.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 103.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 103.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 103.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 102.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 102.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 102.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 102.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 102.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 101.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 101.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 101.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 101.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 100.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 100.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 100.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 100.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 100.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 100.2
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 100.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 99.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 99.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 98.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 98.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 97.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 97.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 97.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 97.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 97.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 97.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 96.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 95.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 95.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 95.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 94.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 94.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 93.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 93.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 93.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 93.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 93.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 92.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 92.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 91.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 91.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 91.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 91.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 91.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 90.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 90.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 89.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 89.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 89.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 88.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 88.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 88.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 88.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 88.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 87.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 87.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 86.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 86.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 86.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 86.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 85.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 85.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 85.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 85.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 85.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 85.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 83.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 83.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 83.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 83.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 83.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 82.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 82.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 82.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 82.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 82.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 82.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 82.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 81.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 80.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 80.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 80.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 80.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 80.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 80.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 80.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 79.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 79.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 79.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 79.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 78.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 78.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 78.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 78.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 78.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 78.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 77.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 77.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 76.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 76.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 76.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 75.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 75.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 75.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 75.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 75.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 75.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 75.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 73.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 73.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 72.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 72.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 71.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 71.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 71.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 71.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 70.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 70.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 69.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 69.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 69.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 69.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 68.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 68.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 68.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 67.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 67.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 67.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 67.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 66.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 66.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 65.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 65.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 64.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 64.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 63.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 63.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 61.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 61.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 61.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 61.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 60.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 60.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 60.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 59.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 58.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 58.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 58.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 57.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 57.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 57.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 56.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 56.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 55.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 55.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 55.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 54.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 54.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 54.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 53.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 51.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 51.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 50.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 50.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 49.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 45.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 45.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 43.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 27.6
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 80.5
Samples: 246

Max nTPM: 210.3
Min nTPM: 32.3
Std nTPM: 31.5
Median nTPM: 74.3
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 210.3
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 197.4
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 190.7
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 165.8
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 164.7
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 163.9
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 162.3
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 162.2
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 161.7
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 161.1
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 157.3
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 137.4
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 133.9
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 133.1
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 130.6
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 130.0
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 129.4
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 127.8
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 127.4
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 127.0
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 123.0
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 122.3
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 120.7
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 120.7
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 120.6
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 119.1
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 118.7
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 117.4
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 116.9
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 116.9
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 116.9
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 115.2
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 114.9
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 114.9
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 114.7
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 114.0
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 112.3
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 111.6
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 109.2
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 107.9
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 107.8
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 107.0
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 106.9
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 106.5
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 106.0
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 106.0
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 105.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 105.4
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 103.6
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 103.6
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 103.5
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 102.4
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 101.5
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 101.4
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 100.7
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 99.9
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 99.6
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 99.6
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 99.5
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 99.4
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 98.3
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 97.9
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 97.8
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 97.8
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 95.3
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 95.2
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 95.0
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 94.9
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 94.2
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 94.1
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 93.6
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 92.2
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 92.1
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 91.1
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 90.9
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 90.3
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 90.2
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 89.6
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 89.2
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 89.0
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 89.0
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 88.9
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 88.6
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 88.1
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 87.7
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 87.6
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 87.4
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 85.6
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 85.3
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 84.7
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 83.7
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 83.3
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 83.3
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 83.1
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 83.0
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 82.6
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 82.6
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 82.4
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 82.3
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 82.3
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 81.8
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 81.4
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 81.2
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 80.7
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 79.5
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 78.6
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 78.5
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 78.5
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 78.2
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 78.1
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 78.0
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 77.3
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 77.0
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 76.5
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 76.0
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 75.8
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 75.7
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 75.4
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 75.3
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 75.0
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 74.5
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 74.4
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 74.4
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 74.2
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 74.0
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 73.8
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 73.7
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 73.7
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 73.5
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 73.2
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 73.1
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 73.0
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 72.6
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 72.5
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 72.4
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 72.4
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 72.2
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 72.0
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 69.5
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 69.4
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 68.8
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 68.5
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 67.7
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 67.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 67.4
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 67.1
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 67.0
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 67.0
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 66.2
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 66.0
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 65.9
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 65.6
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 65.6
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 65.4
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 65.3
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 64.7
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 64.4
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 64.2
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 64.0
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 64.0
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 63.7
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 63.2
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 62.5
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 62.5
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 62.4
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 61.7
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 61.5
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 61.3
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 61.1
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 60.9
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 60.3
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 60.1
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 60.1
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 60.1
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 59.4
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 59.3
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 59.3
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 59.3
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 59.2
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 59.1
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 58.2
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 58.0
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 57.3
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 57.1
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 57.0
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 57.0
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 56.9
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 56.8
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 56.4
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 56.2
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 56.2
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 56.0
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 55.8
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 55.6
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 55.2
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 55.1
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 54.5
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 54.5
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 54.3
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 53.8
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 53.6
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 52.7
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 52.5
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 52.4
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 52.3
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 51.8
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 51.7
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 51.0
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 50.9
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 50.2
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 49.8
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 49.5
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 49.5
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 49.4
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 49.4
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 49.2
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 47.9
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 47.9
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 47.7
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 47.4
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 46.3
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 46.1
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 45.7
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 45.6
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 45.5
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 44.5
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 43.5
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 43.2
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 42.7
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 42.4
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 42.3
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 41.9
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 41.7
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 41.4
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 41.2
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 40.9
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 40.8
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 40.1
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 39.5
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 38.9
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 38.4
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 37.3
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 35.8
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 35.5
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 34.6
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 32.3
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Brain - Putamen (basal ganglia)
Average nTPM: 100.2
Samples: 205

Max nTPM: 224.3
Min nTPM: 40.0
Std nTPM: 29.9
Median nTPM: 96.5
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 224.3
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 207.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 192.1
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 177.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 174.2
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 173.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 169.8
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 165.2
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 162.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 161.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 156.0
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 155.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 152.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 148.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 147.8
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 145.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 141.6
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 141.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 141.0
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 138.8
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 137.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 136.7
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 136.1
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 133.5
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 132.9
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 132.6
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 132.3
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 130.8
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 130.3
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 130.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 129.3
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 128.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 128.2
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 128.1
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 127.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 127.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 125.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 123.9
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 123.6
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 121.5
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 120.7
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 119.6
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 119.4
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 118.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 118.9
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 118.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 118.0
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 117.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 115.7
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 115.5
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 115.5
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 115.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 114.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 114.4
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 114.3
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 114.3
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 113.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 113.2
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 112.5
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 112.2
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 111.7
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 111.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 110.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 110.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 110.0
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 109.9
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 108.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 107.7
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 107.7
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 106.8
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 106.7
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 106.4
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 106.2
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 106.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 106.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 105.7
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 105.3
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 104.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 104.1
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 103.9
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 103.5
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 103.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 103.3
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 103.2
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 102.7
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 102.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 102.0
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 101.6
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 101.4
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 101.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 100.8
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 100.8
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 100.5
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 100.2
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 100.2
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 100.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 99.6
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 99.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 97.7
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 97.3
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 97.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 96.6
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 96.5
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 95.9
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 95.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 95.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 95.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 94.6
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 94.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 94.0
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 93.5
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 93.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 93.3
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 92.6
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 92.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 92.5
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 92.0
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 91.7
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 91.4
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 89.9
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 89.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 89.6
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 89.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 89.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 88.7
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 88.7
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 87.8
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 86.8
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 86.0
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 85.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 85.3
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 85.2
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 85.2
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 84.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 84.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 84.5
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 84.5
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 84.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 84.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 84.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 84.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 82.7
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 82.3
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 81.4
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 81.2
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 81.1
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 80.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 80.6
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 80.3
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 80.1
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 79.9
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 79.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 79.8
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 78.8
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 76.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 76.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 76.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 76.1
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 75.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 75.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 74.9
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 74.9
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 74.6
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 74.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 74.3
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 74.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 74.1
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 73.8
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 73.8
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 73.7
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 73.5
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 73.3
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 72.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 71.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 71.6
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 71.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 70.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 70.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 69.6
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 69.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 68.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 68.6
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 68.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 67.6
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 66.9
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 66.3
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 65.9
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 65.4
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 63.9
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 63.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 63.7
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 63.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 62.3
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 62.2
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 62.1
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 60.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 60.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 58.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 58.2
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 56.2
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 54.9
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 53.2
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 50.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 48.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 40.0
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

145.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 78.8
FF:10164-103B2 76 years, female 78.8
Nucleus accumbens
Scaled Tags Per Million: 52.7
FF:10037-101F1 23-56 years, mixed 52.7
Putamen
Scaled Tags Per Million: 41.9
FF:10176-103C5 60 years, female 41.9
Globus pallidus
Scaled Tags Per Million: 145.4
FF:10161-103A8 76 years, female 170.1
FF:10175-103C4 60 years, female 120.8

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

68.5
Pig sample Sample description nTPM
Caudate
nTPM: 46.7
Samples: 4

Max nTPM: 56.0
Min nTPM: 37.5
Sample A Female 56.0
Sample B Female 45.0
Sample C Male 48.2
Sample D Male 37.5
Putamen
nTPM: 68.5
Samples: 4

Max nTPM: 105.5
Min nTPM: 48.6
Sample A Female 105.5
Sample B Female 48.6
Sample C Male 67.1
Sample D Male 52.9
Septum
nTPM: 67.5
Samples: 4

Max nTPM: 96.0
Min nTPM: 48.6
Sample A Female 96.0
Sample B Female 50.8
Sample C Male 74.7
Sample D Male 48.6
Ventral pallidum
nTPM: 53.6
Samples: 4

Max nTPM: 58.0
Min nTPM: 46.1
Sample A Female 58.0
Sample B Female 55.6
Sample C Male 54.7
Sample D Male 46.1

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

55.9
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 55.9
Samples: 4

Max nTPM: 59.0
Min nTPM: 52.3
Sample A Male 59.0
Sample B Male 55.9
Sample C Female 52.3
Sample D Female 56.3
Septum
nTPM: 52.9
Samples: 4

Max nTPM: 60.5
Min nTPM: 45.4
Sample A Male 45.4
Sample B Male 52.2
Sample C Female 60.5
Sample D Female 53.3
Ventral forebrain
nTPM: 45.7
Samples: 4

Max nTPM: 53.4
Min nTPM: 40.4
Sample A Male 40.4
Sample B Male 46.1
Sample C Female 53.4
Sample D Female 42.8

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

4.8
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 4.8
75774115 Antisense, RP_060530_01_B11, Mouse strain C57BL/6J (56 days, male) 6.3
293915 Antisense, RP_040617_01_G02, Mouse strain C57BL/6J (56 days, male) 3.2
Pallidum
Expression energy: 4.8
75774115 Antisense, RP_060530_01_B11, Mouse strain C57BL/6J (56 days, male) 7.1
293915 Antisense, RP_040617_01_G02, Mouse strain C57BL/6J (56 days, male) 2.5

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