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ZNF410
HPA
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  • ZNF410
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

ZNF410
Synonyms APA-1, APA1
Gene descriptioni

Full gene name according to HGNC.

Zinc finger protein 410
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Plasma proteins
Transcription factors
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 14
Cytoband q24.3
Chromosome location (bp) 73886617 - 73932521
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

15
Ensembl ENSG00000119725 (version 109)
Entrez gene 57862
HGNC HGNC:20144
UniProt Q86VK4 (UniProt - Evidence at protein level)
neXtProt NX_Q86VK4
GeneCards ZNF410
Antibodypedia ZNF410 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Transcription factor that binds to the sequence motif 5'- CATCCCATAATA-3', and is specifically required to silence expression of fetal hemoglobin in adult erythroid cells 1, 2. Prevents expression of fetal hemoglobin genes HBG1 and HBG2 through CHD4: acts as a direct transcriptional activator of CHD4, a central component of the NuRD complex that represses transcription of fetal hemoglobin genes HBG1 and HBG2 in erythroid cells 3, 4. May also activate transcription of matrix-remodeling genes such as MMP1 during fibroblast senescence 5. May activate transcription of the gap junction gene GJC1, perhaps in response to increasing glucose 6. However, recent studies suggest that ZNF410 is dedicated to regulate expression of a single gene: CHD4 7, 8.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Activator, DNA-binding
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Transcription, Transcription regulation
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

Metal-binding, Zinc
Gene summary (Entrez)i

Useful information about the gene from Entrez

Enables sequence-specific double-stranded DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Apr 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
ZNF410-201
ENSP00000323293
ENST00000324593
Q86VK4
[Direct mapping] Zinc finger protein 410
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Transcription factors
   Zinc-coordinating DNA-binding domains
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0000978 [RNA polymerase II cis-regulatory region sequence-specific DNA binding]
GO:0003677 [DNA binding]
GO:0003712 [transcription coregulator activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005694 [chromosome]
GO:0006351 [DNA-templated transcription]
GO:0006357 [regulation of transcription by RNA polymerase II]
GO:0010629 [negative regulation of gene expression]
GO:0045944 [positive regulation of transcription by RNA polymerase II]
GO:0046872 [metal ion binding]
GO:1990837 [sequence-specific double-stranded DNA binding]
Show all
431 aa
47.3 kDa
No 0
ZNF410-202
ENSP00000334170
ENST00000334521
J3KNQ6
[Direct mapping] Zinc finger protein 410
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
425 aa
46.4 kDa
No 0
ZNF410-205
ENSP00000407130
ENST00000442160
Q86VK4
[Direct mapping] Zinc finger protein 410
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Transcription factors
   Zinc-coordinating DNA-binding domains
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0000978 [RNA polymerase II cis-regulatory region sequence-specific DNA binding]
GO:0003677 [DNA binding]
GO:0003712 [transcription coregulator activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005694 [chromosome]
GO:0006351 [DNA-templated transcription]
GO:0006357 [regulation of transcription by RNA polymerase II]
GO:0010629 [negative regulation of gene expression]
GO:0045944 [positive regulation of transcription by RNA polymerase II]
GO:0046872 [metal ion binding]
GO:1990837 [sequence-specific double-stranded DNA binding]
Show all
516 aa
55.8 kDa
No 0
ZNF410-206
ENSP00000442228
ENST00000540593
Q86VK4
[Direct mapping] Zinc finger protein 410
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Transcription factors
   Zinc-coordinating DNA-binding domains
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0000978 [RNA polymerase II cis-regulatory region sequence-specific DNA binding]
GO:0003677 [DNA binding]
GO:0003712 [transcription coregulator activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005694 [chromosome]
GO:0006351 [DNA-templated transcription]
GO:0006357 [regulation of transcription by RNA polymerase II]
GO:0010629 [negative regulation of gene expression]
GO:0045944 [positive regulation of transcription by RNA polymerase II]
GO:0046872 [metal ion binding]
GO:1990837 [sequence-specific double-stranded DNA binding]
Show all
405 aa
44.3 kDa
No 0
ZNF410-208
ENSP00000451748
ENST00000554316
G3V4E6
[Direct mapping] Zinc finger protein 410
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
94 aa
10.6 kDa
No 0
ZNF410-210
ENSP00000451116
ENST00000554797
G3V398
[Direct mapping] Zinc finger protein 410
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
70 aa
7.6 kDa
No 0
ZNF410-211
ENSP00000451763
ENST00000555044
Q86VK4
[Direct mapping] Zinc finger protein 410
Show all
A0A024R691
[Target identity:100%; Query identity:100%] Zinc finger protein 410, isoform CRA_b
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Transcription factors
   Zinc-coordinating DNA-binding domains
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0000978 [RNA polymerase II cis-regulatory region sequence-specific DNA binding]
GO:0003677 [DNA binding]
GO:0003712 [transcription coregulator activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005694 [chromosome]
GO:0006351 [DNA-templated transcription]
GO:0006357 [regulation of transcription by RNA polymerase II]
GO:0010629 [negative regulation of gene expression]
GO:0045944 [positive regulation of transcription by RNA polymerase II]
GO:0046872 [metal ion binding]
GO:1990837 [sequence-specific double-stranded DNA binding]
Show all
478 aa
52.1 kDa
No 0
ZNF410-214
ENSP00000451807
ENST00000555730
G3V4H7
[Direct mapping] Zinc finger protein 410
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
378 aa
41.6 kDa
No 0
ZNF410-215
ENSP00000451458
ENST00000556160
G3V3W2
[Direct mapping] Zinc finger protein 410
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
74 aa
8 kDa
No 0
ZNF410-216
ENSP00000450884
ENST00000556179
G3V2V5
[Direct mapping] Zinc finger protein 410
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
110 aa
11.7 kDa
No 0
ZNF410-218
ENSP00000452023
ENST00000556659
G3V4W2
[Direct mapping] Zinc finger protein 410
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
125 aa
13.5 kDa
No 0
ZNF410-219
ENSP00000451073
ENST00000556797
G3V369
[Direct mapping] Zinc finger protein 410
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
167 aa
18 kDa
No 0
ZNF410-220
ENSP00000451620
ENST00000557214
H0YJI7
[Direct mapping] Zinc finger protein 410
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
169 aa
18.2 kDa
No 0
ZNF410-221
ENSP00000450569
ENST00000557495
G3V2C2
[Direct mapping] Zinc finger protein 410
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
127 aa
13.7 kDa
No 0
ZNF410-223
ENSP00000483073
ENST00000615736
Q86VK4
[Direct mapping] Zinc finger protein 410
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Transcription factors
   Zinc-coordinating DNA-binding domains
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0000978 [RNA polymerase II cis-regulatory region sequence-specific DNA binding]
GO:0003677 [DNA binding]
GO:0003712 [transcription coregulator activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005694 [chromosome]
GO:0006351 [DNA-templated transcription]
GO:0006357 [regulation of transcription by RNA polymerase II]
GO:0010629 [negative regulation of gene expression]
GO:0045944 [positive regulation of transcription by RNA polymerase II]
GO:0046872 [metal ion binding]
GO:1990837 [sequence-specific double-stranded DNA binding]
Show all
516 aa
55.8 kDa
No 0

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