HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:96.0 nTPM
HPA Brain:76.1 nTPM
GTEx:96.0 nTPM
FANTOM5:102.6 Scaled Tags Per Million
Pig:57.2 nTPM
Mouse:30.2 nTPM
Allen mouse:3.7 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 76.1
Sample id Sample description nTPM
Hippocampus
nTPM: 65.2
1898 Male, age 80, left hemisphere 81.2
2621 Female, age 67, right hemisphere 69.5
2529 Female, age 94, left hemisphere 68.4
1855 Male, age 76, left hemisphere 67.5
1911 Female, age 85, right hemisphere 57.4
2148 Female, age 91, left hemisphere 46.9
Dentate gyrus
nTPM: 64.3
2010 Male, age 76, both hemispheres 107.8
2530 Female, age 94, left hemisphere 76.7
2531 Female, age 67, both hemispheres 67.4
2528 Male, age 74, both hemispheres 48.8
1927 Female, age 91, both hemispheres 48.2
2246 Female, age 85, both hemispheres 37.1
Entorhinal gyrus
nTPM: 51.5
2117 Female, age 91, right hemisphere 70.6
2686 Male, age 75, right hemisphere 58.2
1787 Male, age 76, left hemisphere 55.2
2764 Male, age 80, right hemisphere 45.7
2613 Female, age 94, left hemisphere 44.1
1938 Female, age 85, left hemisphere 35.0
Hippocampus, CA1
nTPM: 61.3
2045 Male, age 76, both hemispheres 134.6
1873 Female, age 85, both hemispheres 48.6
2749 Male, age 80, left hemisphere 46.8
2527 Male, age 74, both hemispheres 38.9
2082 Female, age 91, right hemisphere 37.4
Hippocampus, CA2
nTPM: 68.6
1892 Male, age 76, both hemispheres 91.1
1940 Female, age 85, left hemisphere 81.1
2437 Female, age 94, left hemisphere 74.7
2249 Male, age 74, both hemispheres 67.4
1963 Male, age 80, left hemisphere 57.2
2113 Female, age 91, right hemisphere 40.2
Hippocampus, CA3
nTPM: 76.1
1867 Male, age 76, both hemispheres 115.4
2436 Male, age 74, both hemispheres 99.8
2861 Female, age 67, both hemispheres 91.5
2137 Male, age 80, left hemisphere 60.2
2620 Female, age 94, left hemisphere 44.9
1891 Female, age 85, both hemispheres 44.8
Parahippocampal cortex
nTPM: 49.8
2018 Male, age 76, both hemispheres 89.7
1990 Female, age 91, right hemisphere 63.8
2622 Female, age 67, right hemisphere 58.2
2245 Female, age 91, both hemispheres 48.5
2693 Female, age 94, both hemispheres 48.3
2250 Female, age 67, right hemisphere 41.5
1850 Male, age 80, both hemispheres 40.7
2532 Female, age 72, left hemisphere 39.5
1933 Female, age 85, both hemispheres 35.4
2692 Male, age 74, both hemispheres 32.1
Perirhinal gyrus
nTPM: 55.8
2521 Female, age 94, right hemisphere 70.2
2848 Male, age 76, right hemisphere 65.9
1841 Female, age 85, right hemisphere 60.2
1794 Male, age 80, right hemisphere 44.1
1847 Female, age 91, left hemisphere 38.5
Subiculum
nTPM: 60.0
2042 Male, age 76, both hemispheres 103.9
1901 Male, age 80, both hemispheres 64.3
2729 Female, age 91, right hemisphere 54.4
2438 Female, age 94, left hemisphere 52.0
2619 Male, age 74, both hemispheres 43.8
1977 Female, age 85, both hemispheres 41.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 96.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 96.0
Samples: 197

Max nTPM: 320.2
Min nTPM: 16.0
Std nTPM: 61.6
Median nTPM: 77.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 320.2
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 317.1
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 314.1
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 266.8
GTEX-145LS-0011-R1b-SM-5PNUP 60-69 years, female 244.2
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 230.7
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 228.8
GTEX-14E7W-0011-R1b-SM-5YYAT 70-79 years, male 227.5
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 227.1
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 226.8
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 222.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 102.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 102.6
FF:10153-102I9 76 years, female 137.8
FF:10169-103B7 60 years, female 67.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 57.2
Pig sample Sample description nTPM
Subiculum
nTPM: 47.2
Samples: 4

Max nTPM: 71.5
Min nTPM: 18.1
Sample A Female 49.4
Sample B Female 18.1
Sample C Male 71.5
Sample D Male 49.9
Dorsal hippocampus
nTPM: 30.7
Samples: 4

Max nTPM: 56.2
Min nTPM: 15.3
Sample A Female 30.6
Sample B Female 15.3
Sample C Male 56.2
Sample D Male 20.8
Entorhinal cortex
nTPM: 57.2
Samples: 4

Max nTPM: 76.6
Min nTPM: 38.7
Sample A Female 76.6
Sample B Female 38.7
Sample C Male 71.9
Sample D Male 41.6
Ventral hippocampus
nTPM: 44.1
Samples: 4

Max nTPM: 91.4
Min nTPM: 22.0
Sample A Female 35.8
Sample B Female 22.0
Sample C Male 91.4
Sample D Male 27.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 30.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 30.2
Samples: 4

Max nTPM: 46.2
Min nTPM: 15.1
Sample A Male 35.1
Sample B Male 46.2
Sample C Female 15.1
Sample D Female 24.3
Hippocampal formation
nTPM: 13.3
Samples: 4

Max nTPM: 17.1
Min nTPM: 10.1
Sample A Male 17.1
Sample B Male 11.3
Sample C Female 10.1
Sample D Female 14.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 3.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.7
71608353 Antisense, RP_050927_01_E09, Mouse strain C57BL/6J (56 days, male) 4.6
324212 Antisense, RP_040617_01_E07, Mouse strain C57BL/6J (56 days, male) 2.8

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