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SLC10A7
HPA
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  • SLC10A7
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

SLC10A7
Synonyms C4orf13, DKFZp313H0531, DKFZp566M114, DKFZp779O2438, MGC25043
Gene descriptioni

Full gene name according to HGNC.

Solute carrier family 10 member 7
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Human disease related genes
Potential drug targets
Transporters
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane, Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 4
Cytoband q31.22
Chromosome location (bp) 146253975 - 146522372
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

7
Ensembl ENSG00000120519 (version 109)
Entrez gene 84068
HGNC HGNC:23088
UniProt Q0GE19 (UniProt - Evidence at protein level)
neXtProt NX_Q0GE19
GeneCards SLC10A7
Antibodypedia SLC10A7 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Involved in teeth and skeletal development. Has an essential role in the biosynthesis and trafficking of glycosaminoglycans and glycoproteins, to produce a proper functioning extracellular matrix. Required for extracellular matrix mineralization 1, 2. Also involved in the regulation of cellular calcium homeostasis 3, 4. Does not show transport activity towards bile acids or steroid sulfates (including taurocholate, cholate, chenodeoxycholate, estrone-3-sulfate, dehydroepiandrosterone sulfate (DHEAS) and pregnenolone sulfate).... show less
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Ion transport, Sodium transport, Symport, Transport
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

Sodium
Gene summary (Entrez)i

Useful information about the gene from Entrez

Enables bile acid transmembrane transporter activity. Involved in several processes, including cellular calcium ion homeostasis; glycoprotein transport; and heparin biosynthetic process. Located in Golgi apparatus and endoplasmic reticulum. Is intrinsic component of plasma membrane. [provided by Alliance of Genome Resources, Apr 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
SLC10A7-201
ENSP00000334594
ENST00000335472
Q0GE19
[Direct mapping] Sodium/bile acid cotransporter 7
Show all
Transporters
   Electrochemical Potential-driven transporters
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   9TM proteins predicted by MDM
Disease related genes
Potential drug targets
Human disease related genes
   Congenital malformations
   Other congenital malformations
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0000139 [Golgi membrane]
GO:0005783 [endoplasmic reticulum]
GO:0005789 [endoplasmic reticulum membrane]
GO:0005794 [Golgi apparatus]
GO:0005797 [Golgi medial cisterna]
GO:0005801 [cis-Golgi network]
GO:0005802 [trans-Golgi network]
GO:0005886 [plasma membrane]
GO:0006811 [ion transport]
GO:0006814 [sodium ion transport]
GO:0006874 [cellular calcium ion homeostasis]
GO:0015125 [bile acid transmembrane transporter activity]
GO:0015293 [symporter activity]
GO:0015721 [bile acid and bile salt transport]
GO:0016020 [membrane]
GO:0030210 [heparin biosynthetic process]
GO:0034436 [glycoprotein transport]
GO:0048193 [Golgi vesicle transport]
GO:0055085 [transmembrane transport]
GO:0060348 [bone development]
Show all
340 aa
37.4 kDa
No 9
SLC10A7-202
ENSP00000377623
ENST00000394059
Q0GE19
[Direct mapping] Sodium/bile acid cotransporter 7
Show all
Transporters
   Electrochemical Potential-driven transporters
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   2TM proteins predicted by MDM
Disease related genes
Potential drug targets
Human disease related genes
   Congenital malformations
   Other congenital malformations
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0000139 [Golgi membrane]
GO:0005783 [endoplasmic reticulum]
GO:0005789 [endoplasmic reticulum membrane]
GO:0005794 [Golgi apparatus]
GO:0005797 [Golgi medial cisterna]
GO:0005801 [cis-Golgi network]
GO:0005802 [trans-Golgi network]
GO:0005886 [plasma membrane]
GO:0006811 [ion transport]
GO:0006814 [sodium ion transport]
GO:0006874 [cellular calcium ion homeostasis]
GO:0015125 [bile acid transmembrane transporter activity]
GO:0015293 [symporter activity]
GO:0015721 [bile acid and bile salt transport]
GO:0016020 [membrane]
GO:0030210 [heparin biosynthetic process]
GO:0034436 [glycoprotein transport]
GO:0048193 [Golgi vesicle transport]
GO:0055085 [transmembrane transport]
GO:0060348 [bone development]
Show all
159 aa
17.3 kDa
No 2
SLC10A7-203
ENSP00000411297
ENST00000432059
Q0GE19
[Direct mapping] Sodium/bile acid cotransporter 7
Show all
Transporters
   Electrochemical Potential-driven transporters
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   7TM proteins predicted by MDM
Disease related genes
Potential drug targets
Human disease related genes
   Congenital malformations
   Other congenital malformations
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0000139 [Golgi membrane]
GO:0005783 [endoplasmic reticulum]
GO:0005789 [endoplasmic reticulum membrane]
GO:0005794 [Golgi apparatus]
GO:0005797 [Golgi medial cisterna]
GO:0005801 [cis-Golgi network]
GO:0005802 [trans-Golgi network]
GO:0005886 [plasma membrane]
GO:0006811 [ion transport]
GO:0006814 [sodium ion transport]
GO:0006874 [cellular calcium ion homeostasis]
GO:0015125 [bile acid transmembrane transporter activity]
GO:0015293 [symporter activity]
GO:0015721 [bile acid and bile salt transport]
GO:0016020 [membrane]
GO:0030210 [heparin biosynthetic process]
GO:0034436 [glycoprotein transport]
GO:0048193 [Golgi vesicle transport]
GO:0055085 [transmembrane transport]
GO:0060348 [bone development]
Show all
327 aa
36.1 kDa
No 7
SLC10A7-204
ENSP00000422577
ENST00000502607
Q0GE19
[Direct mapping] Sodium/bile acid cotransporter 7
Show all
Transporters
   Electrochemical Potential-driven transporters
   MEMSAT3 predicted membrane proteins
   Phobius predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   Phobius predicted secreted proteins
   DeepSig predicted secreted proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Potential drug targets
Human disease related genes
   Congenital malformations
   Other congenital malformations
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0000139 [Golgi membrane]
GO:0005783 [endoplasmic reticulum]
GO:0005789 [endoplasmic reticulum membrane]
GO:0005794 [Golgi apparatus]
GO:0005797 [Golgi medial cisterna]
GO:0005801 [cis-Golgi network]
GO:0005802 [trans-Golgi network]
GO:0005886 [plasma membrane]
GO:0006811 [ion transport]
GO:0006814 [sodium ion transport]
GO:0006874 [cellular calcium ion homeostasis]
GO:0015125 [bile acid transmembrane transporter activity]
GO:0015293 [symporter activity]
GO:0015721 [bile acid and bile salt transport]
GO:0016020 [membrane]
GO:0030210 [heparin biosynthetic process]
GO:0034436 [glycoprotein transport]
GO:0048193 [Golgi vesicle transport]
GO:0055085 [transmembrane transport]
GO:0060348 [bone development]
Show all
64 aa
7 kDa
No 0
SLC10A7-205
ENSP00000421275
ENST00000507030
Q0GE19
[Direct mapping] Sodium/bile acid cotransporter 7
Show all
Transporters
   Electrochemical Potential-driven transporters
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   9TM proteins predicted by MDM
Disease related genes
Potential drug targets
Human disease related genes
   Congenital malformations
   Other congenital malformations
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0000139 [Golgi membrane]
GO:0005783 [endoplasmic reticulum]
GO:0005789 [endoplasmic reticulum membrane]
GO:0005794 [Golgi apparatus]
GO:0005797 [Golgi medial cisterna]
GO:0005801 [cis-Golgi network]
GO:0005802 [trans-Golgi network]
GO:0005886 [plasma membrane]
GO:0006811 [ion transport]
GO:0006814 [sodium ion transport]
GO:0006874 [cellular calcium ion homeostasis]
GO:0015125 [bile acid transmembrane transporter activity]
GO:0015293 [symporter activity]
GO:0015721 [bile acid and bile salt transport]
GO:0016020 [membrane]
GO:0030210 [heparin biosynthetic process]
GO:0034436 [glycoprotein transport]
GO:0048193 [Golgi vesicle transport]
GO:0055085 [transmembrane transport]
GO:0060348 [bone development]
Show all
358 aa
39.5 kDa
No 9
SLC10A7-208
ENSP00000421603
ENST00000511374
Q0GE19
[Direct mapping] Sodium/bile acid cotransporter 7
Show all
Transporters
   Electrochemical Potential-driven transporters
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
   Phobius predicted secreted proteins
Disease related genes
Potential drug targets
Human disease related genes
   Congenital malformations
   Other congenital malformations
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0000139 [Golgi membrane]
GO:0005783 [endoplasmic reticulum]
GO:0005789 [endoplasmic reticulum membrane]
GO:0005794 [Golgi apparatus]
GO:0005797 [Golgi medial cisterna]
GO:0005801 [cis-Golgi network]
GO:0005802 [trans-Golgi network]
GO:0005886 [plasma membrane]
GO:0006811 [ion transport]
GO:0006814 [sodium ion transport]
GO:0006874 [cellular calcium ion homeostasis]
GO:0015125 [bile acid transmembrane transporter activity]
GO:0015293 [symporter activity]
GO:0015721 [bile acid and bile salt transport]
GO:0016020 [membrane]
GO:0030210 [heparin biosynthetic process]
GO:0034436 [glycoprotein transport]
GO:0048193 [Golgi vesicle transport]
GO:0055085 [transmembrane transport]
GO:0060348 [bone development]
Show all
85 aa
9.4 kDa
No 1
SLC10A7-211
ENSP00000508969
ENST00000693222
A0A8I5QJB5
[Direct mapping] Sodium/bile acid cotransporter
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   7TM proteins predicted by MDM
Human disease related genes
   Congenital malformations
   Other congenital malformations
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0000139 [Golgi membrane]
GO:0005783 [endoplasmic reticulum]
GO:0005789 [endoplasmic reticulum membrane]
GO:0005886 [plasma membrane]
GO:0006811 [ion transport]
GO:0006814 [sodium ion transport]
GO:0015293 [symporter activity]
GO:0016020 [membrane]
GO:0055085 [transmembrane transport]
Show all
370 aa
40.8 kDa
No 7

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