HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:14.4 nTPM
HPA Brain:5.9 nTPM
GTEx:14.4 nTPM
FANTOM5:13.0 Scaled Tags Per Million
Pig:15.8 nTPM
Mouse:10.4 nTPM
Allen mouse:2.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039702Antibody HPA043942Antibody CAB034240
Glial cells MediumLowHigh
Neuronal cells MediumMediumMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 5.9
Sample id Sample description nTPM
Hippocampus
nTPM: 5.0
2621 Female, age 67, right hemisphere 5.6
1911 Female, age 85, right hemisphere 5.5
1855 Male, age 76, left hemisphere 5.4
1898 Male, age 80, left hemisphere 4.9
2148 Female, age 91, left hemisphere 4.6
2529 Female, age 94, left hemisphere 4.1
Dentate gyrus
nTPM: 5.2
2010 Male, age 76, both hemispheres 6.7
2530 Female, age 94, left hemisphere 5.4
2246 Female, age 85, both hemispheres 5.2
2531 Female, age 67, both hemispheres 4.9
2528 Male, age 74, both hemispheres 4.7
1927 Female, age 91, both hemispheres 4.4
Entorhinal gyrus
nTPM: 4.9
2117 Female, age 91, right hemisphere 6.1
1938 Female, age 85, left hemisphere 5.9
1787 Male, age 76, left hemisphere 5.3
2764 Male, age 80, right hemisphere 4.5
2686 Male, age 75, right hemisphere 3.8
2613 Female, age 94, left hemisphere 3.6
Hippocampus, CA1
nTPM: 5.4
1873 Female, age 85, both hemispheres 6.6
2045 Male, age 76, both hemispheres 6.1
2527 Male, age 74, both hemispheres 5.7
2082 Female, age 91, right hemisphere 4.7
2749 Male, age 80, left hemisphere 3.9
Hippocampus, CA2
nTPM: 5.4
2249 Male, age 74, both hemispheres 6.5
1940 Female, age 85, left hemisphere 6.2
2437 Female, age 94, left hemisphere 6.0
1892 Male, age 76, both hemispheres 5.2
2113 Female, age 91, right hemisphere 4.9
1963 Male, age 80, left hemisphere 3.9
Hippocampus, CA3
nTPM: 4.8
1891 Female, age 85, both hemispheres 6.0
1867 Male, age 76, both hemispheres 5.6
2436 Male, age 74, both hemispheres 4.9
2137 Male, age 80, left hemisphere 4.5
2620 Female, age 94, left hemisphere 4.3
2861 Female, age 67, both hemispheres 3.6
Parahippocampal cortex
nTPM: 5.3
1933 Female, age 85, both hemispheres 7.4
1850 Male, age 80, both hemispheres 6.9
2693 Female, age 94, both hemispheres 6.3
2018 Male, age 76, both hemispheres 5.7
2532 Female, age 72, left hemisphere 5.6
1990 Female, age 91, right hemisphere 5.0
2250 Female, age 67, right hemisphere 4.9
2692 Male, age 74, both hemispheres 4.2
2245 Female, age 91, both hemispheres 4.0
2622 Female, age 67, right hemisphere 3.5
Perirhinal gyrus
nTPM: 5.6
2521 Female, age 94, right hemisphere 6.1
1841 Female, age 85, right hemisphere 5.6
1847 Female, age 91, left hemisphere 5.5
2848 Male, age 76, right hemisphere 5.4
1794 Male, age 80, right hemisphere 5.3
Subiculum
nTPM: 5.9
2042 Male, age 76, both hemispheres 7.4
1977 Female, age 85, both hemispheres 6.7
2619 Male, age 74, both hemispheres 5.5
2729 Female, age 91, right hemisphere 5.5
1901 Male, age 80, both hemispheres 5.3
2438 Female, age 94, left hemisphere 5.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 14.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.4
Samples: 197

Max nTPM: 34.9
Min nTPM: 6.5
Std nTPM: 5.0
Median nTPM: 13.7
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 34.9
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 33.2
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 29.2
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 27.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 27.1
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 26.0
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 25.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 24.9
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 24.8
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 24.7
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 24.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 13.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 13.0
FF:10169-103B7 60 years, female 14.5
FF:10153-102I9 76 years, female 11.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 15.8
Pig sample Sample description nTPM
Subiculum
nTPM: 12.7
Samples: 4

Max nTPM: 13.2
Min nTPM: 11.4
Sample A Female 13.2
Sample B Female 13.2
Sample C Male 11.4
Sample D Male 12.9
Dorsal hippocampus
nTPM: 15.8
Samples: 4

Max nTPM: 18.3
Min nTPM: 13.0
Sample A Female 18.3
Sample B Female 14.5
Sample C Male 17.2
Sample D Male 13.0
Entorhinal cortex
nTPM: 12.0
Samples: 4

Max nTPM: 14.5
Min nTPM: 10.3
Sample A Female 11.0
Sample B Female 14.5
Sample C Male 12.1
Sample D Male 10.3
Ventral hippocampus
nTPM: 13.1
Samples: 4

Max nTPM: 14.1
Min nTPM: 12.1
Sample A Female 14.0
Sample B Female 12.1
Sample C Male 12.1
Sample D Male 14.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 10.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 10.2
Samples: 4

Max nTPM: 12.9
Min nTPM: 6.9
Sample A Male 12.9
Sample B Male 11.1
Sample C Female 9.7
Sample D Female 6.9
Hippocampal formation
nTPM: 10.5
Samples: 4

Max nTPM: 12.9
Min nTPM: 9.1
Sample A Male 12.9
Sample B Male 10.3
Sample C Female 9.1
Sample D Female 9.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 2.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.1
69672180 Antisense, RP_050428_03_B12, Mouse strain C57BL/6J (56 days, male) 2.3
74658079 Antisense, RP_060220_04_D04, Mouse strain C57BL/6J (56 days, male) 1.9

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