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NCAPH
HPA
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  • NCAPH
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

NCAPH
Synonyms BRRN1, CAP-H, hCAP-H
Gene descriptioni

Full gene name according to HGNC.

Non-SMC condensin I complex subunit H
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Human disease related genes
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 2
Cytoband q11.2
Chromosome location (bp) 96335766 - 96377091
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

6
Ensembl ENSG00000121152 (version 109)
Entrez gene 23397
HGNC HGNC:1112
UniProt Q15003 (UniProt - Evidence at protein level)
neXtProt NX_Q15003
GeneCards NCAPH
Antibodypedia NCAPH antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases 1. Early in neurogenesis, may play an essential role to ensure accurate mitotic chromosome condensation in neuron stem cells, ultimately affecting neuron pool and cortex size 2.... show less
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Cell cycle, Cell division, DNA condensation, Mitosis
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes a member of the barr gene family and a regulatory subunit of the condensin complex. This complex is required for the conversion of interphase chromatin into condensed chromosomes. The protein encoded by this gene is associated with mitotic chromosomes, except during the early phase of chromosome condensation. During interphase, the protein has a distinct punctate nucleolar localization. Alternatively spliced transcript variants encoding different proteins have been described. [provided by RefSeq, Jul 2013]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
NCAPH-201
ENSP00000240423
ENST00000240423
Q15003
[Direct mapping] Condensin complex subunit 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000794 [condensed nuclear chromosome]
GO:0000796 [condensin complex]
GO:0003682 [chromatin binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005694 [chromosome]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0007049 [cell cycle]
GO:0007076 [mitotic chromosome condensation]
GO:0007143 [female meiotic nuclear division]
GO:0010032 [meiotic chromosome condensation]
GO:0016020 [membrane]
GO:0030261 [chromosome condensation]
GO:0045132 [meiotic chromosome segregation]
GO:0051301 [cell division]
GO:0051309 [female meiosis chromosome separation]
GO:0051984 [positive regulation of chromosome segregation]
GO:1905820 [positive regulation of chromosome separation]
GO:1905821 [positive regulation of chromosome condensation]
Show all
741 aa
82.6 kDa
No 0
NCAPH-202
ENSP00000400774
ENST00000427946
Q15003
[Direct mapping] Condensin complex subunit 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000794 [condensed nuclear chromosome]
GO:0000796 [condensin complex]
GO:0003682 [chromatin binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005694 [chromosome]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0007049 [cell cycle]
GO:0007076 [mitotic chromosome condensation]
GO:0016020 [membrane]
GO:0030261 [chromosome condensation]
GO:0051301 [cell division]
GO:0051984 [positive regulation of chromosome segregation]
GO:1905820 [positive regulation of chromosome separation]
GO:1905821 [positive regulation of chromosome condensation]
Show all
605 aa
67.5 kDa
No 0
NCAPH-203
ENSP00000415162
ENST00000435349
H7C415
[Direct mapping] Condensin complex subunit 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000796 [condensin complex]
GO:0005694 [chromosome]
GO:0005737 [cytoplasm]
GO:0007049 [cell cycle]
GO:0007076 [mitotic chromosome condensation]
GO:0051301 [cell division]
Show all
182 aa
20 kDa
No 0
NCAPH-204
ENSP00000405237
ENST00000435975
C9J470
[Direct mapping] Condensin complex subunit 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000796 [condensin complex]
GO:0005654 [nucleoplasm]
GO:0005694 [chromosome]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0007049 [cell cycle]
GO:0007076 [mitotic chromosome condensation]
GO:0051301 [cell division]
Show all
607 aa
68 kDa
No 0
NCAPH-205
ENSP00000407308
ENST00000455200
E9PHA2
[Direct mapping] Condensin complex subunit 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000796 [condensin complex]
GO:0005654 [nucleoplasm]
GO:0005694 [chromosome]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0007049 [cell cycle]
GO:0007076 [mitotic chromosome condensation]
GO:0030261 [chromosome condensation]
GO:0051301 [cell division]
Show all
730 aa
81.6 kDa
No 0
NCAPH-206
ENSP00000401227
ENST00000456906
C9JZP1
[Direct mapping] Condensin complex subunit 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000796 [condensin complex]
GO:0005694 [chromosome]
GO:0005737 [cytoplasm]
GO:0007049 [cell cycle]
GO:0007076 [mitotic chromosome condensation]
GO:0051301 [cell division]
Show all
216 aa
24 kDa
No 0

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