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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:44.0 nTPM
HPA Brain:51.6 nTPM
GTEx:44.0 nTPM
FANTOM5:121.5 Scaled Tags Per Million
Pig:27.3 nTPM
Mouse:165.0 nTPM
Allen mouse:0.2 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA055754Antibody CAB017830
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

51.6
Sample id Sample description nTPM
Caudate nucleus
nTPM: 26.4
1781 Male, age 74, unknown 38.3
2288 Male, age 75, left hemisphere 31.2
2290 Female, age 72, unknown 29.2
2846 Female, age 79, unknown 29.1
1857 Female, age 85, left hemisphere 22.4
2289 Male, age 61, right hemisphere 21.4
1854 Male, age 80, left hemisphere 21.0
2481 Female, age 94, left hemisphere 18.3
Globus pallidus, externus
nTPM: 33.3
1996 Male, age 80, right hemisphere 41.0
2772 Female, age 79, unknown 40.6
2395 Male, age 75, both hemispheres 35.5
2567 Female, age 72, unknown 27.3
2646 Male, age 61, right hemisphere 21.9
Globus pallidus, internus
nTPM: 36.3
2287 Male, age 75, right hemisphere 47.9
2778 Female, age 91, both hemispheres 40.8
1818 Male, age 74, unknown 40.7
2037 Male, age 80, right hemisphere 37.3
2566 Female, age 72, unknown 33.1
2111 Female, age 85, right hemisphere 28.9
2483 Female, age 94, right hemisphere 25.7
Nucleus accumbens
nTPM: 26.2
2824 Male, age 61, right hemisphere 32.1
1856 Female, age 91, right hemisphere 28.3
2698 Female, age 72, unknown 27.9
1783 Male, age 74, unknown 27.4
2286 Male, age 75, left hemisphere 26.4
1806 Female, age 85, left hemisphere 24.0
2391 Female, age 94, left hemisphere 22.2
2732 Male, age 80, right hemisphere 21.1
Nucleus basalis of Meynert
nTPM: 24.9
2821 Male, age 75, both hemispheres 28.9
2393 Male, age 80, right hemisphere 24.3
2484 Female, age 94, left hemisphere 23.9
2569 Male, age 61, both hemispheres 22.4
Nucleus of the diagonal band
nTPM: 51.6
2195 Female, age 85, both hemispheres 68.0
2775 Male, age 80, right hemisphere 66.8
2029 Male, age 61, right hemisphere 51.4
1812 Female, age 91, both hemispheres 47.6
1979 Male, age 74, unknown 24.3
Putamen
nTPM: 24.1
2466 Female, age 79, unknown 28.3
2647 Male, age 75, left hemisphere 27.0
1838 Male, age 80, right hemisphere 25.3
1829 Male, age 74, unknown 24.3
2489 Female, age 72, unknown 22.2
1937 Female, age 91, right hemisphere 22.0
2482 Female, age 94, left hemisphere 19.8
Septal nuclei
nTPM: 49.3
1960 Male, age 74, unknown 93.6
2629 Female, age 94, right hemisphere 55.3
2031 Female, age 72, unknown 55.1
2059 Female, age 85, both hemispheres 49.3
2009 Female, age 91, both hemispheres 36.9
2394 Male, age 61, left hemisphere 36.2
2199 Male, age 80, right hemisphere 18.9
Stria terminalis, bed nucleus
nTPM: 45.7
2486 Female, age 94, both hemispheres 57.5
1974 Female, age 91, both hemispheres 52.2
2201 Male, age 74, unknown 27.5

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

44.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 38.7
Samples: 246

Max nTPM: 157.2
Min nTPM: 5.2
Std nTPM: 22.2
Median nTPM: 36.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 157.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 134.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 117.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 106.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 95.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 90.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 84.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 82.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 82.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 80.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 80.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 79.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 78.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 78.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 73.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 71.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 71.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 71.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 71.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 71.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 70.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 69.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 69.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 66.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 64.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 64.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 64.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 63.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 61.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 61.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 61.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 61.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 60.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 60.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 60.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 60.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 60.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 57.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 57.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 57.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 57.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 57.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 55.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 55.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 54.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 54.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 54.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 54.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 53.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 53.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 52.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 52.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 51.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 51.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 51.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 51.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 51.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 51.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 51.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 50.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 50.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 50.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 50.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 49.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 49.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 48.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 48.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 47.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 47.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 47.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 47.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 47.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 47.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 46.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 46.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 46.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 46.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 45.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 45.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 45.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 45.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 45.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 45.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 45.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 45.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 44.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 44.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 44.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 44.5
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 44.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 42.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 42.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 42.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 42.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 42.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 42.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 42.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 41.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 41.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 40.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 40.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 40.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 40.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 39.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 39.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 39.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 39.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 39.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 39.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 39.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 39.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 39.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 39.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 39.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 38.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 38.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 38.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 38.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 37.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 37.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 37.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 37.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 36.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 36.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 35.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 35.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 35.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 35.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 34.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 34.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 34.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 34.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 34.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 34.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 33.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 33.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 33.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 32.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 32.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 31.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 31.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 31.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 31.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 30.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 30.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 30.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 30.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 30.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 30.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 30.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 29.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 29.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 29.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 29.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 29.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 29.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 29.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 29.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 28.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 27.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 27.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 27.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 27.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 27.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 26.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 26.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 25.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 25.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 25.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 25.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 24.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 24.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 24.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 24.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 24.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 24.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 23.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 23.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 23.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 23.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 22.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 22.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 22.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 22.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 22.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 22.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 21.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 21.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 21.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 20.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 20.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 20.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 20.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 20.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 20.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 20.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 20.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 19.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 19.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 19.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 18.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 18.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 18.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 18.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 18.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 18.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 17.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 17.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 17.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 17.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 17.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 16.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 15.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 15.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 14.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 14.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 14.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 14.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 14.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 13.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 13.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 13.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 13.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 13.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 12.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 12.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 12.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 11.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 11.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 11.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 11.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 11.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 11.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 10.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 10.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 10.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 9.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 8.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 8.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 7.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 7.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 7.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 6.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 6.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 5.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 5.2
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 44.0
Samples: 246

Max nTPM: 229.8
Min nTPM: 5.2
Std nTPM: 24.5
Median nTPM: 43.0
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 229.8
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 174.7
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 149.0
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 102.0
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 101.0
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 98.1
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 89.0
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 85.9
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 83.9
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 81.9
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 80.3
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 78.6
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 77.9
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 77.2
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 76.7
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 73.5
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 72.5
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 71.2
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 69.1
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 68.4
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 67.8
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 67.5
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 67.2
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 67.0
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 66.5
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 66.3
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 66.3
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 65.5
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 62.7
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 62.6
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 61.9
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 60.9
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 60.5
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 60.4
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 60.2
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 59.9
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 59.6
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 59.5
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 59.0
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 58.9
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 58.9
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 58.6
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 58.5
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 58.5
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 58.4
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 57.9
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 57.8
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 57.4
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 57.4
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 57.2
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 57.2
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 57.1
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 56.8
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 56.8
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 56.7
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 56.6
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 56.4
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 56.0
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 55.5
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 55.3
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 55.2
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 55.2
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 54.8
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 54.7
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 54.5
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 53.9
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 53.8
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 53.6
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 53.6
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 53.5
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 53.1
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 52.9
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 52.5
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 52.5
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 51.9
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 51.5
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 51.2
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 50.9
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 50.8
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 50.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 50.5
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 50.3
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 50.0
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 49.9
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 49.6
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 49.2
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 48.9
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 48.4
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 48.2
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 48.0
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 47.9
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 47.8
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 47.8
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 47.8
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 47.5
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 47.5
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 47.4
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 47.3
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 47.2
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 47.2
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 47.0
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 46.8
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 46.3
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 46.0
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 45.9
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 45.7
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 45.5
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 45.5
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 45.4
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 45.3
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 45.1
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 45.0
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 44.7
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 44.6
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 44.5
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 44.3
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 44.3
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 44.2
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 44.1
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 44.0
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 43.9
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 43.4
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 43.0
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 43.0
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 43.0
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 42.8
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 42.7
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 42.4
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 42.3
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 41.9
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 41.8
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 41.7
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 41.7
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 41.4
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 41.4
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 41.3
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 41.0
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 40.6
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 40.2
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 40.1
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 39.9
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 39.7
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 39.6
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 39.6
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 39.5
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 39.4
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 39.3
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 39.2
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 37.7
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 37.7
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 37.7
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 37.5
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 37.5
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 37.5
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 37.4
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 37.1
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 37.0
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 37.0
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 37.0
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 36.9
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 36.6
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 36.5
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 36.5
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 36.3
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 35.8
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 35.8
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 34.9
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 34.7
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 34.4
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 34.0
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 34.0
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 33.9
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 33.6
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 33.5
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 32.9
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 32.5
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 32.1
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 32.0
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 32.0
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 31.9
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 31.5
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 31.1
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 30.8
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 30.2
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 30.2
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 30.0
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 30.0
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 29.5
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 29.3
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 28.9
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 28.3
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 28.3
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 27.3
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 27.2
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 27.1
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 25.5
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 25.1
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 24.9
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 24.0
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 23.8
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 23.7
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 23.4
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 22.7
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 22.4
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 22.1
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 21.5
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 21.4
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 21.3
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 20.8
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 20.1
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 19.7
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 19.4
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 18.8
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 18.6
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 18.5
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 18.5
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 18.2
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 17.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 17.6
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 16.9
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 16.8
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 16.3
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 15.1
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 15.0
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 14.6
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 14.5
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 14.5
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 14.1
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 14.1
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 13.2
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 11.9
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 11.7
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 11.1
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 10.6
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 10.3
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 9.8
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 9.8
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 9.7
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 9.6
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 9.5
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 9.4
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 8.7
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 8.3
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 7.2
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 6.2
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 5.2
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Brain - Putamen (basal ganglia)
Average nTPM: 37.6
Samples: 205

Max nTPM: 192.8
Min nTPM: 5.7
Std nTPM: 21.2
Median nTPM: 36.1
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 192.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 102.5
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 98.7
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 90.4
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 87.4
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 86.5
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 78.9
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 74.1
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 68.5
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 68.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 67.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 66.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 66.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 66.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 66.0
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 65.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 64.9
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 63.1
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 63.1
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 60.9
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 60.8
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 58.2
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 57.2
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 57.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 57.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 56.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 56.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 55.8
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 55.7
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 55.6
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 55.2
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 55.0
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 53.7
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 53.6
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 53.2
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 53.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 52.9
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 52.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 52.6
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 52.5
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 52.1
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 51.9
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 51.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 51.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 51.2
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 50.6
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 50.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 50.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 48.1
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 47.7
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 47.4
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 47.2
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 47.1
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 47.0
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 46.8
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 46.7
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 46.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 46.2
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 46.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 45.9
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 45.3
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 45.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 45.0
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 44.8
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 44.4
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 44.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 43.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 43.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 43.2
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 43.2
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 43.1
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 42.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 42.5
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 41.7
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 41.4
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 41.4
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 40.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 40.6
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 40.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 40.2
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 40.1
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 40.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 40.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 39.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 39.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 39.2
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 39.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 38.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 38.6
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 38.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 38.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 38.4
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 38.3
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 37.3
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 37.1
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 37.1
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 36.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 36.5
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 36.4
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 36.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 36.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 36.2
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 36.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 36.1
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 35.9
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 35.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 35.3
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 35.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 35.1
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 34.9
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 34.7
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 34.5
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 34.0
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 33.0
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 33.0
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 32.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 32.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 32.5
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 32.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 32.2
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 32.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 31.9
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 31.5
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 31.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 30.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 30.9
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 30.6
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 30.2
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 30.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 30.0
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 30.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 29.9
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 28.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 28.3
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 28.2
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 28.1
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 27.8
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 27.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 27.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 27.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 27.3
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 26.9
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 26.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 26.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 26.1
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 26.1
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 25.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 25.6
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 25.6
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 25.3
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 25.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 24.8
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 24.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 24.3
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 24.1
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 23.7
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 23.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 23.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 23.3
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 23.1
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 23.0
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 22.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 22.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 22.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 20.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 20.4
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 20.2
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 19.2
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 18.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 17.6
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 16.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 16.4
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 16.0
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 15.9
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 15.7
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 15.6
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 15.2
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 15.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 15.0
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 14.7
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 14.6
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 14.5
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 14.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 14.2
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 13.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 13.2
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 12.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 12.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 11.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 11.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 11.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 10.9
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 10.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 10.6
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 10.5
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 10.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 10.0
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 9.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 8.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 8.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 8.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 7.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 7.2
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 7.1
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 5.7
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

121.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 34.6
FF:10164-103B2 76 years, female 34.6
Nucleus accumbens
Scaled Tags Per Million: 121.5
FF:10037-101F1 23-56 years, mixed 121.5
Putamen
Scaled Tags Per Million: 48.4
FF:10176-103C5 60 years, female 48.4
Globus pallidus
Scaled Tags Per Million: 83.4
FF:10175-103C4 60 years, female 123.9
FF:10161-103A8 76 years, female 42.8

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

27.3
Pig sample Sample description nTPM
Caudate
nTPM: 19.6
Samples: 4

Max nTPM: 23.6
Min nTPM: 16.7
Sample A Female 16.7
Sample B Female 19.4
Sample C Male 18.7
Sample D Male 23.6
Putamen
nTPM: 23.6
Samples: 4

Max nTPM: 31.3
Min nTPM: 18.1
Sample A Female 22.7
Sample B Female 18.1
Sample C Male 31.3
Sample D Male 22.3
Septum
nTPM: 27.3
Samples: 4

Max nTPM: 35.7
Min nTPM: 22.6
Sample A Female 22.6
Sample B Female 24.1
Sample C Male 35.7
Sample D Male 26.9
Ventral pallidum
nTPM: 25.9
Samples: 4

Max nTPM: 40.7
Min nTPM: 17.5
Sample A Female 22.8
Sample B Female 22.4
Sample C Male 40.7
Sample D Male 17.5

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

165.0
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 112.6
Samples: 4

Max nTPM: 126.0
Min nTPM: 98.9
Sample A Male 98.9
Sample B Male 103.7
Sample C Female 126.0
Sample D Female 121.7
Septum
nTPM: 142.0
Samples: 4

Max nTPM: 149.9
Min nTPM: 132.9
Sample A Male 148.4
Sample B Male 136.8
Sample C Female 149.9
Sample D Female 132.9
Ventral forebrain
nTPM: 165.0
Samples: 4

Max nTPM: 170.9
Min nTPM: 157.1
Sample A Male 164.3
Sample B Male 157.1
Sample C Female 170.9
Sample D Female 167.7

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.2
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.1
68076552 Antisense, RP_040923_02_G01, Mouse strain C57BL/6J (56 days, male) 0.3
418 Antisense, RP_Baylor_102768, Mouse strain C57BL/6J (56 days, male) 0.0
Pallidum
Expression energy: 0.2
68076552 Antisense, RP_040923_02_G01, Mouse strain C57BL/6J (56 days, male) 0.5
418 Antisense, RP_Baylor_102768, Mouse strain C57BL/6J (56 days, male) 0.0

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