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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:58.3 nTPM
HPA Brain:31.1 nTPM
GTEx:58.3 nTPM
FANTOM5:14.5 Scaled Tags Per Million
Pig:6.7 nTPM
Mouse:0.1 nTPM
Allen mouse:0.1 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA060864
Glial cells Not detected
Neuronal cells Not detected


BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

31.1
Sample id Sample description nTPM
Caudate nucleus
nTPM: 23.1
2481 Female, age 94, left hemisphere 33.2
2290 Female, age 72, unknown 25.1
1781 Male, age 74, unknown 23.4
2289 Male, age 61, right hemisphere 23.3
1854 Male, age 80, left hemisphere 21.9
2288 Male, age 75, left hemisphere 21.2
2846 Female, age 79, unknown 18.5
1857 Female, age 85, left hemisphere 18.3
Globus pallidus, externus
nTPM: 31.1
2646 Male, age 61, right hemisphere 41.7
1996 Male, age 80, right hemisphere 31.0
2772 Female, age 79, unknown 30.3
2567 Female, age 72, unknown 28.4
2395 Male, age 75, both hemispheres 24.0
Globus pallidus, internus
nTPM: 26.5
2483 Female, age 94, right hemisphere 36.5
2566 Female, age 72, unknown 28.1
2037 Male, age 80, right hemisphere 26.5
1818 Male, age 74, unknown 25.5
2111 Female, age 85, right hemisphere 24.4
2287 Male, age 75, right hemisphere 23.1
2778 Female, age 91, both hemispheres 21.7
Nucleus accumbens
nTPM: 24.2
2732 Male, age 80, right hemisphere 28.3
1783 Male, age 74, unknown 26.6
2698 Female, age 72, unknown 26.0
2286 Male, age 75, left hemisphere 23.7
2391 Female, age 94, left hemisphere 23.4
2824 Male, age 61, right hemisphere 23.2
1806 Female, age 85, left hemisphere 22.4
1856 Female, age 91, right hemisphere 19.8
Nucleus basalis of Meynert
nTPM: 27.3
2569 Male, age 61, both hemispheres 48.4
2484 Female, age 94, left hemisphere 24.4
2821 Male, age 75, both hemispheres 19.4
2393 Male, age 80, right hemisphere 17.1
Nucleus of the diagonal band
nTPM: 28.9
2195 Female, age 85, both hemispheres 35.8
2775 Male, age 80, right hemisphere 31.4
1812 Female, age 91, both hemispheres 30.0
2029 Male, age 61, right hemisphere 25.2
1979 Male, age 74, unknown 22.2
Putamen
nTPM: 20.4
2647 Male, age 75, left hemisphere 35.7
2482 Female, age 94, left hemisphere 29.7
2489 Female, age 72, unknown 18.2
1937 Female, age 91, right hemisphere 17.6
1829 Male, age 74, unknown 15.3
1838 Male, age 80, right hemisphere 13.7
2466 Female, age 79, unknown 12.9
Septal nuclei
nTPM: 28.1
1960 Male, age 74, unknown 36.0
2059 Female, age 85, both hemispheres 32.5
2009 Female, age 91, both hemispheres 26.8
2629 Female, age 94, right hemisphere 26.4
2031 Female, age 72, unknown 26.2
2199 Male, age 80, right hemisphere 24.9
2394 Male, age 61, left hemisphere 23.9
Stria terminalis, bed nucleus
nTPM: 27.4
2201 Male, age 74, unknown 29.7
1974 Female, age 91, both hemispheres 29.5
2486 Female, age 94, both hemispheres 22.9

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

58.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 45.0
Samples: 246

Max nTPM: 123.7
Min nTPM: 9.9
Std nTPM: 22.2
Median nTPM: 39.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 123.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 118.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 113.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 113.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 105.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 103.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 103.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 101.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 98.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 98.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 94.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 92.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 86.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 86.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 85.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 84.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 83.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 83.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 83.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 82.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 82.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 78.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 78.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 77.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 76.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 76.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 76.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 74.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 74.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 73.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 73.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 72.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 72.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 71.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 70.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 69.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 68.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 68.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 68.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 68.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 67.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 67.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 67.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 66.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 64.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 64.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 64.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 64.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 64.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 63.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 63.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 62.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 58.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 58.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 58.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 57.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 57.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 57.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 57.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 56.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 56.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 55.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 55.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 54.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 54.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 54.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 54.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 54.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 53.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 53.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 52.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 52.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 52.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 51.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 51.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 50.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 50.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 50.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 50.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 50.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 49.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 49.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 49.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 48.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 48.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 48.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 47.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 47.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 47.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 47.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 46.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 46.5
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 46.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 46.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 45.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 45.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 45.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 45.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 44.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 43.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 43.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 43.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 43.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 43.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 42.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 42.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 42.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 42.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 42.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 42.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 42.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 41.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 41.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 41.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 41.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 40.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 40.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 40.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 40.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 40.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 40.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 40.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 39.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 39.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 39.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 39.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 38.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 38.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 38.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 37.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 37.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 37.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 37.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 37.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 37.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 36.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 36.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 36.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 36.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 35.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 35.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 35.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 35.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 35.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 34.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 34.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 34.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 34.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 34.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 34.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 33.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 33.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 33.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 33.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 33.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 32.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 32.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 32.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 31.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 31.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 31.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 31.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 31.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 31.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 31.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 30.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 30.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 30.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 30.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 30.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 30.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 30.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 30.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 29.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 29.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 29.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 29.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 28.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 28.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 28.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 28.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 28.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 28.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 28.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 28.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 27.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 27.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 27.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 27.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 27.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 27.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 27.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 26.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 26.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 26.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 26.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 26.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 26.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 26.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 26.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 26.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 25.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 25.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 25.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 25.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 25.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 25.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 25.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 25.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 24.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 24.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 24.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 24.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 24.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 24.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 23.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 23.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 23.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 22.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 22.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 22.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 22.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 22.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 22.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 21.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 21.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 21.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 21.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 20.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 20.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 20.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 20.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 19.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 19.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 19.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 19.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 18.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 18.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 17.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 17.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 16.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 16.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 15.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 15.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 13.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 9.9
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 58.3
Samples: 246

Max nTPM: 197.0
Min nTPM: 17.2
Std nTPM: 31.3
Median nTPM: 49.5
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 197.0
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 186.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 184.5
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 163.6
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 161.5
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 154.2
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 141.4
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 139.1
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 133.7
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 129.4
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 128.9
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 128.9
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 125.5
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 122.0
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 119.7
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 111.7
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 110.9
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 108.2
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 106.0
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 105.6
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 103.9
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 103.3
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 101.0
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 100.6
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 100.2
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 98.1
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 97.1
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 96.6
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 95.8
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 93.3
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 92.7
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 91.9
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 90.4
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 89.3
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 88.8
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 88.0
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 87.9
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 87.2
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 86.8
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 84.9
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 84.5
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 82.2
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 80.9
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 79.4
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 79.3
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 79.1
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 78.9
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 78.8
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 78.6
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 78.4
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 77.9
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 76.7
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 74.5
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 73.9
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 72.7
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 71.3
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 71.3
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 71.3
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 70.4
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 70.3
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 70.2
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 70.0
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 69.8
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 69.4
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 68.9
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 67.6
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 67.2
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 66.9
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 66.0
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 65.9
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 65.8
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 64.6
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 64.6
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 64.6
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 63.9
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 63.8
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 62.6
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 62.1
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 61.8
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 61.7
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 61.1
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 60.6
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 59.9
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 59.6
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 59.2
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 59.2
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 58.9
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 58.4
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 58.2
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 58.1
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 57.8
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 57.5
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 57.1
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 57.0
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 56.5
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 56.0
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 55.8
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 55.5
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 55.5
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 55.3
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 54.9
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 54.8
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 54.8
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 54.6
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 54.1
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 54.1
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 53.9
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 53.7
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 53.6
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 53.5
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 53.4
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 53.0
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 52.5
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 52.3
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 52.3
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 52.2
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 52.0
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 51.7
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 51.4
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 51.0
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 50.9
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 50.9
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 49.7
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 49.4
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 49.3
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 49.2
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 49.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 48.8
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 47.7
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 47.7
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 47.5
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 47.3
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 47.2
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 47.2
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 47.0
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 46.8
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 46.6
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 46.1
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 45.8
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 45.8
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 45.2
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 45.1
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 44.7
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 44.3
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 44.2
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 43.9
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 43.7
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 43.7
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 43.6
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 43.4
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 43.1
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 42.9
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 42.7
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 42.7
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 42.6
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 42.4
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 42.3
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 41.8
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 41.8
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 41.8
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 41.7
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 41.4
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 41.4
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 41.4
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 41.1
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 40.6
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 40.6
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 39.9
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 39.8
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 39.8
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 39.8
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 39.6
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 38.8
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 38.6
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 38.6
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 38.4
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 37.8
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 37.8
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 37.6
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 37.6
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 37.6
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 37.2
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 37.2
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 37.1
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 36.8
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 36.6
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 36.5
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 36.4
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 36.1
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 36.1
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 35.9
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 35.6
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 35.2
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 34.9
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 34.9
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 34.8
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 34.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 34.5
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 34.4
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 34.4
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 34.3
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 34.3
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 33.5
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 33.2
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 33.2
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 32.6
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 32.5
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 32.4
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 32.1
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 32.0
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 32.0
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 31.9
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 31.9
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 31.5
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 31.1
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 30.8
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 30.6
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 30.5
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 30.3
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 30.0
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 29.8
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 29.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 29.6
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 29.0
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 28.9
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 28.8
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 28.5
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 28.4
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 28.3
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 28.0
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 27.9
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 27.9
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 27.3
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 26.6
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 26.3
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 26.1
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 24.3
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 24.3
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 23.9
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 23.6
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 23.5
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 22.2
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 20.0
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 19.9
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 18.9
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 17.2
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Brain - Putamen (basal ganglia)
Average nTPM: 45.5
Samples: 205

Max nTPM: 118.9
Min nTPM: 8.4
Std nTPM: 23.3
Median nTPM: 40.0
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 118.9
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 114.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 110.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 109.2
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 107.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 106.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 106.4
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 99.6
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 99.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 98.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 96.8
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 96.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 92.3
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 90.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 87.1
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 86.5
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 83.7
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 81.9
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 78.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 77.1
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 76.4
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 76.3
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 75.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 75.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 75.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 74.3
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 74.2
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 74.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 72.7
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 72.0
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 70.9
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 69.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 69.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 67.1
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 67.0
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 67.0
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 66.0
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 65.6
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 64.4
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 64.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 63.7
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 62.8
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 62.7
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 62.7
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 62.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 62.3
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 60.8
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 59.7
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 59.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 58.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 57.7
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 57.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 57.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 57.0
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 56.9
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 56.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 55.1
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 54.5
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 54.4
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 53.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 53.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 53.0
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 52.5
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 52.1
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 51.7
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 51.1
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 50.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 50.3
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 49.5
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 49.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 49.3
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 48.4
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 48.3
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 48.0
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 47.9
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 47.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 47.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 46.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 46.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 46.7
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 46.5
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 46.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 45.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 45.4
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 45.2
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 45.1
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 45.0
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 44.7
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 44.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 44.2
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 43.5
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 43.5
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 43.4
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 43.2
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 42.9
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 42.3
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 41.9
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 41.8
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 41.4
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 40.8
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 40.8
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 40.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 40.0
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 39.4
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 39.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 38.6
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 38.6
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 38.3
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 38.2
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 37.9
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 37.5
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 37.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 36.9
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 36.4
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 36.2
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 36.2
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 35.5
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 35.4
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 35.2
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 34.8
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 34.5
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 34.1
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 34.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 33.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 33.5
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 33.4
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 33.1
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 33.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 32.7
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 32.4
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 31.8
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 31.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 31.3
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 31.3
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 31.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 30.7
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 30.4
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 30.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 30.3
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 29.9
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 29.8
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 29.7
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 29.5
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 29.3
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 29.2
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 29.2
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 28.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 28.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 28.7
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 28.6
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 28.5
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 28.5
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 28.2
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 28.1
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 27.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 27.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 27.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 27.6
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 27.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 27.4
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 27.3
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 27.3
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 27.2
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 27.0
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 27.0
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 26.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 26.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 26.5
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 26.5
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 26.5
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 25.1
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 24.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 24.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 24.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 23.7
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 23.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 23.5
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 23.2
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 22.8
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 22.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 22.5
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 22.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 22.4
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 22.3
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 21.9
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 21.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 21.3
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 21.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 20.5
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 20.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 20.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 19.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 18.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 18.6
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 17.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 17.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 17.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 16.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 16.1
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 15.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 14.5
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 14.3
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 11.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 11.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 8.4
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

14.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 14.5
FF:10164-103B2 76 years, female 14.5
Nucleus accumbens
Scaled Tags Per Million: 10.4
FF:10037-101F1 23-56 years, mixed 10.4
Putamen
Scaled Tags Per Million: 7.7
FF:10176-103C5 60 years, female 7.7
Globus pallidus
Scaled Tags Per Million: 8.9
FF:10161-103A8 76 years, female 12.3
FF:10175-103C4 60 years, female 5.4

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

6.7
Pig sample Sample description nTPM
Caudate
nTPM: 6.1
Samples: 4

Max nTPM: 7.6
Min nTPM: 5.1
Sample A Female 5.6
Sample B Female 6.0
Sample C Male 7.6
Sample D Male 5.1
Putamen
nTPM: 6.8
Samples: 4

Max nTPM: 9.4
Min nTPM: 3.9
Sample A Female 3.9
Sample B Female 7.6
Sample C Male 9.4
Sample D Male 6.1
Septum
nTPM: 3.1
Samples: 4

Max nTPM: 4.0
Min nTPM: 1.5
Sample A Female 3.9
Sample B Female 4.0
Sample C Male 2.8
Sample D Male 1.5
Ventral pallidum
nTPM: 4.9
Samples: 4

Max nTPM: 5.3
Min nTPM: 3.9
Sample A Female 5.3
Sample B Female 5.3
Sample C Male 5.0
Sample D Male 3.9

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

0.1
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Male 0.0
Sample B Male 0.0
Sample C Female 0.0
Sample D Female 0.0
Septum
nTPM: 0.0
Samples: 4

Max nTPM: 0.1
Min nTPM: 0.0
Sample A Male 0.0
Sample B Male 0.0
Sample C Female 0.0
Sample D Female 0.1
Ventral forebrain
nTPM: 0.1
Samples: 4

Max nTPM: 0.2
Min nTPM: 0.0
Sample A Male 0.0
Sample B Male 0.2
Sample C Female 0.1
Sample D Female 0.0

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.1
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.1
76097730 Antisense, RP_060626_01_E02, Mouse strain C57BL/6J (56 days, male) 0.1
Pallidum
Expression energy: 0.0
76097730 Antisense, RP_060626_01_E02, Mouse strain C57BL/6J (56 days, male) 0.0

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