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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:946.2 nTPM
HPA Brain:1014.1 nTPM
GTEx:946.2 nTPM
FANTOM5:799.3 Scaled Tags Per Million
Pig:1759.8 nTPM
Mouse:2169.7 nTPM
Allen mouse:25.1 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA043245Antibody CAB012340
Glial cells Not detectedNot detected
Neuronal cells HighHigh




BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1014.1
Sample id Sample description nTPM
Caudate nucleus
nTPM: 823.3
2846 Female, age 79, unknown 1213.1
1857 Female, age 85, left hemisphere 1132.4
2290 Female, age 72, unknown 987.0
1854 Male, age 80, left hemisphere 895.8
1781 Male, age 74, unknown 758.6
2288 Male, age 75, left hemisphere 715.5
2289 Male, age 61, right hemisphere 498.8
2481 Female, age 94, left hemisphere 385.2
Globus pallidus, externus
nTPM: 68.6
2646 Male, age 61, right hemisphere 113.3
2395 Male, age 75, both hemispheres 96.9
2567 Female, age 72, unknown 48.0
2772 Female, age 79, unknown 46.2
1996 Male, age 80, right hemisphere 38.5
Globus pallidus, internus
nTPM: 54.2
2483 Female, age 94, right hemisphere 240.6
2566 Female, age 72, unknown 30.0
2037 Male, age 80, right hemisphere 27.7
1818 Male, age 74, unknown 26.4
2287 Male, age 75, right hemisphere 25.0
2778 Female, age 91, both hemispheres 16.6
2111 Female, age 85, right hemisphere 13.5
Nucleus accumbens
nTPM: 579.4
1856 Female, age 91, right hemisphere 973.2
1783 Male, age 74, unknown 931.0
1806 Female, age 85, left hemisphere 819.5
2286 Male, age 75, left hemisphere 545.1
2824 Male, age 61, right hemisphere 510.7
2698 Female, age 72, unknown 491.6
2391 Female, age 94, left hemisphere 253.2
2732 Male, age 80, right hemisphere 110.7
Nucleus basalis of Meynert
nTPM: 569.2
2393 Male, age 80, right hemisphere 868.3
2484 Female, age 94, left hemisphere 772.3
2821 Male, age 75, both hemispheres 458.4
2569 Male, age 61, both hemispheres 177.8
Nucleus of the diagonal band
nTPM: 135.7
1812 Female, age 91, both hemispheres 186.1
2775 Male, age 80, right hemisphere 168.6
2195 Female, age 85, both hemispheres 144.8
2029 Male, age 61, right hemisphere 143.6
1979 Male, age 74, unknown 35.6
Putamen
nTPM: 1014.1
1829 Male, age 74, unknown 1530.7
1838 Male, age 80, right hemisphere 1195.2
2466 Female, age 79, unknown 1131.0
2489 Female, age 72, unknown 1010.0
1937 Female, age 91, right hemisphere 985.4
2647 Male, age 75, left hemisphere 754.7
2482 Female, age 94, left hemisphere 491.8
Septal nuclei
nTPM: 116.3
1960 Male, age 74, unknown 245.4
2031 Female, age 72, unknown 177.4
2629 Female, age 94, right hemisphere 134.3
2009 Female, age 91, both hemispheres 119.7
2059 Female, age 85, both hemispheres 84.4
2394 Male, age 61, left hemisphere 45.7
2199 Male, age 80, right hemisphere 6.8
Stria terminalis, bed nucleus
nTPM: 136.3
2486 Female, age 94, both hemispheres 196.2
1974 Female, age 91, both hemispheres 145.1
2201 Male, age 74, unknown 67.5

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

946.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 860.5
Samples: 246

Max nTPM: 2047.9
Min nTPM: 28.0
Std nTPM: 453.7
Median nTPM: 885.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 2047.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 2027.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 2006.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 1960.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 1903.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1787.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 1731.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 1698.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 1668.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 1652.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 1643.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 1600.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 1592.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 1568.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 1551.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 1524.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 1519.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 1495.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 1470.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 1462.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 1443.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 1442.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 1439.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 1432.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 1430.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 1428.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 1415.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 1404.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 1392.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 1385.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 1374.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 1365.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 1355.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 1351.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 1351.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 1350.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 1337.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 1331.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 1330.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 1302.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 1299.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 1290.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 1290.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 1284.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 1284.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 1284.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 1276.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 1274.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 1271.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 1264.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 1258.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 1255.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 1254.3
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 1245.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 1244.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 1236.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 1232.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 1229.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 1224.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 1222.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 1215.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 1209.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 1197.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 1193.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 1181.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 1181.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 1175.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 1162.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 1159.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 1152.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 1152.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 1142.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 1139.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 1135.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 1135.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 1134.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 1131.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 1118.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 1116.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 1114.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 1112.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 1100.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 1093.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 1090.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 1082.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 1076.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 1060.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 1052.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 1048.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 1045.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 1043.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 1036.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 1032.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 1020.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 1017.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 1016.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 1010.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 1010.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 1009.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 990.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 982.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 971.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 970.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 968.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 966.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 952.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 948.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 948.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 947.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 944.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 942.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 938.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 932.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 929.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 924.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 919.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 916.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 911.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 910.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 897.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 889.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 886.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 885.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 885.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 878.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 874.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 869.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 863.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 849.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 834.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 833.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 831.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 821.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 818.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 815.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 802.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 800.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 779.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 776.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 766.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 757.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 753.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 749.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 748.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 738.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 735.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 732.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 730.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 727.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 726.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 714.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 705.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 698.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 698.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 695.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 691.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 689.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 677.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 673.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 663.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 660.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 652.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 647.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 640.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 639.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 636.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 631.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 630.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 629.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 626.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 620.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 616.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 585.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 574.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 553.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 551.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 528.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 520.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 500.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 499.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 498.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 497.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 491.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 487.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 486.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 479.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 474.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 465.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 459.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 448.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 443.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 432.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 417.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 393.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 388.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 377.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 370.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 359.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 354.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 353.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 344.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 335.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 334.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 324.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 321.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 315.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 314.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 310.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 308.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 307.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 297.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 290.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 288.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 283.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 282.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 280.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 280.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 272.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 268.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 265.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 254.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 246.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 242.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 241.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 240.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 236.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 222.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 208.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 208.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 194.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 183.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 180.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 177.4
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 159.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 152.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 150.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 135.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 131.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 126.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 121.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 106.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 86.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 84.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 68.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 64.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 28.0
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 545.5
Samples: 246

Max nTPM: 1680.1
Min nTPM: 6.4
Std nTPM: 298.9
Median nTPM: 547.0
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 1680.1
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 1622.3
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 1447.4
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 1296.7
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 1199.9
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 1179.5
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 1160.2
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 1137.6
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 1137.5
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 1115.8
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 1115.5
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 1075.9
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 1051.4
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 1047.7
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 1032.5
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 997.6
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 980.1
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 952.5
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 947.5
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 943.7
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 927.8
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 923.8
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 919.7
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 917.1
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 908.8
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 905.0
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 902.1
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 887.1
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 885.6
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 882.9
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 878.6
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 877.9
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 872.2
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 861.3
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 850.4
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 847.9
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 847.4
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 844.9
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 835.0
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 834.1
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 827.7
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 810.9
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 804.5
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 794.1
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 793.8
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 781.4
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 773.6
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 771.7
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 771.4
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 770.5
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 765.8
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 756.1
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 755.5
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 749.3
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 745.8
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 744.4
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 730.6
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 715.0
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 712.1
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 712.0
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 711.5
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 710.4
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 708.0
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 705.1
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 700.7
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 692.2
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 690.4
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 685.9
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 682.3
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 681.1
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 680.1
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 677.3
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 675.8
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 673.0
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 671.6
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 669.8
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 669.4
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 667.2
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 665.8
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 663.9
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 663.9
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 663.6
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 660.8
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 660.3
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 654.7
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 646.9
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 642.0
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 641.8
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 632.7
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 630.5
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 622.9
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 620.7
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 614.6
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 612.5
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 611.4
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 605.8
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 601.8
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 600.8
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 599.4
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 597.7
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 597.2
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 588.8
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 588.5
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 587.6
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 587.0
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 585.4
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 581.5
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 578.4
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 576.2
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 575.1
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 574.3
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 573.9
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 573.5
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 572.9
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 572.6
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 572.4
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 570.8
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 568.1
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 566.6
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 557.3
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 556.0
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 549.9
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 548.7
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 545.3
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 544.3
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 542.4
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 539.9
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 539.6
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 538.5
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 534.9
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 529.6
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 525.5
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 524.8
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 522.8
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 522.7
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 521.6
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 520.5
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 520.4
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 517.7
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 515.4
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 508.8
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 508.2
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 506.1
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 505.6
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 499.5
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 499.1
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 497.7
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 497.1
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 482.0
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 481.4
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 476.1
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 475.2
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 468.5
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 467.4
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 466.4
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 464.4
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 451.5
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 450.2
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 445.0
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 437.7
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 436.2
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 435.7
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 435.4
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 434.4
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 429.9
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 425.4
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 423.7
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 417.3
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 410.8
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 407.6
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 401.5
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 389.9
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 384.4
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 375.1
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 374.1
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 374.0
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 373.4
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 362.5
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 358.4
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 356.6
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 356.3
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 342.3
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 338.4
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 334.9
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 325.6
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 322.1
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 317.3
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 316.5
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 310.7
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 304.2
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 303.7
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 290.8
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 288.2
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 283.7
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 283.4
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 278.4
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 269.4
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 260.7
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 254.5
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 254.2
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 243.4
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 236.1
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 232.7
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 230.5
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 230.3
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 228.5
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 227.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 225.8
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 225.8
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 223.6
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 218.7
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 217.4
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 213.9
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 204.8
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 185.0
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 183.4
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 180.6
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 172.5
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 166.1
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 156.9
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 148.5
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 134.5
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 132.9
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 132.8
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 130.0
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 124.8
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 120.9
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 117.7
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 110.8
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 96.3
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 82.3
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 58.3
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 58.0
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 57.8
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 54.9
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 42.9
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 42.8
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 39.5
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 37.7
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 36.4
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 28.4
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 22.7
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 19.9
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 18.9
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 9.8
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 6.4
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Brain - Putamen (basal ganglia)
Average nTPM: 946.2
Samples: 205

Max nTPM: 2304.3
Min nTPM: 52.3
Std nTPM: 522.5
Median nTPM: 931.6
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 2304.3
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 2258.4
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 2249.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 1960.3
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 1949.8
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 1926.1
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 1902.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 1847.0
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 1824.4
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 1809.1
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 1803.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 1785.8
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 1782.0
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 1733.6
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 1698.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 1687.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 1685.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 1678.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 1673.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 1665.1
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 1648.8
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 1643.6
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 1643.2
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 1638.1
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 1592.3
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 1584.1
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 1573.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 1570.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 1546.7
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 1542.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 1529.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 1489.3
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 1483.4
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 1482.8
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 1464.2
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 1448.6
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 1448.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 1442.4
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 1442.0
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 1431.4
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 1428.4
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 1421.5
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 1421.0
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 1406.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 1403.9
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 1403.5
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 1401.5
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 1390.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 1379.7
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 1379.6
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 1379.0
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 1337.6
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 1336.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 1325.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 1318.9
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 1309.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 1308.6
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 1301.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 1300.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 1268.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 1260.0
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 1243.8
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 1211.1
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 1206.0
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 1200.3
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 1195.8
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 1177.9
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 1159.1
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 1159.0
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 1158.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 1143.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 1134.0
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 1118.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 1117.6
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 1112.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 1112.7
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 1110.8
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 1110.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 1106.6
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 1102.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 1099.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 1097.2
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 1088.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 1079.5
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 1077.7
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 1076.2
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 1060.5
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 1049.8
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 1040.2
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 1037.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 1030.8
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 1029.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 1027.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 1021.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 1017.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 1016.8
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 1016.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 1014.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 1011.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 989.5
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 979.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 966.0
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 931.6
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 926.6
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 925.3
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 924.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 922.1
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 919.5
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 910.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 906.3
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 902.8
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 895.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 887.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 885.8
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 877.3
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 867.8
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 866.9
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 850.7
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 848.5
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 840.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 839.8
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 839.7
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 836.4
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 807.2
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 795.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 789.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 780.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 756.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 751.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 751.2
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 748.2
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 745.0
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 734.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 728.3
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 721.5
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 720.6
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 720.6
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 693.1
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 685.3
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 673.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 640.7
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 640.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 636.7
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 616.9
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 589.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 582.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 565.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 551.2
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 547.3
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 544.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 509.4
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 493.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 478.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 475.9
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 468.4
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 458.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 450.9
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 444.7
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 440.0
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 431.2
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 408.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 408.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 407.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 394.8
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 382.2
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 364.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 361.4
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 352.5
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 352.0
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 345.6
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 342.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 339.4
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 325.1
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 319.8
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 306.5
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 299.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 296.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 291.1
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 286.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 273.4
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 271.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 271.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 267.8
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 223.9
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 220.6
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 219.0
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 213.7
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 213.4
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 206.1
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 198.6
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 198.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 184.8
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 169.1
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 164.9
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 163.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 160.9
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 157.0
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 134.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 133.0
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 130.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 113.7
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 74.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 72.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 61.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 52.3
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

799.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 376.4
FF:10164-103B2 76 years, female 376.4
Nucleus accumbens
Scaled Tags Per Million: 799.3
FF:10037-101F1 23-56 years, mixed 799.3
Putamen
Scaled Tags Per Million: 763.7
FF:10176-103C5 60 years, female 763.7
Globus pallidus
Scaled Tags Per Million: 388.6
FF:10175-103C4 60 years, female 724.3
FF:10161-103A8 76 years, female 52.9

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1759.8
Pig sample Sample description nTPM
Caudate
nTPM: 1457.4
Samples: 4

Max nTPM: 2067.3
Min nTPM: 1019.4
Sample A Female 1019.4
Sample B Female 1394.0
Sample C Male 2067.3
Sample D Male 1348.9
Putamen
nTPM: 1759.8
Samples: 4

Max nTPM: 3073.9
Min nTPM: 455.5
Sample A Female 455.5
Sample B Female 1676.6
Sample C Male 3073.9
Sample D Male 1833.0
Septum
nTPM: 265.5
Samples: 4

Max nTPM: 557.1
Min nTPM: 33.2
Sample A Female 410.6
Sample B Female 557.1
Sample C Male 33.2
Sample D Male 61.1
Ventral pallidum
nTPM: 637.6
Samples: 4

Max nTPM: 860.8
Min nTPM: 162.9
Sample A Female 840.4
Sample B Female 860.8
Sample C Male 162.9
Sample D Male 686.3

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2169.7
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 2169.7
Samples: 4

Max nTPM: 2788.5
Min nTPM: 1670.6
Sample A Male 2401.9
Sample B Male 2788.5
Sample C Female 1670.6
Sample D Female 1817.8
Septum
nTPM: 382.5
Samples: 4

Max nTPM: 423.4
Min nTPM: 355.9
Sample A Male 380.9
Sample B Male 423.4
Sample C Female 355.9
Sample D Female 369.8
Ventral forebrain
nTPM: 919.7
Samples: 4

Max nTPM: 1013.2
Min nTPM: 803.1
Sample A Male 1013.2
Sample B Male 803.1
Sample C Female 996.4
Sample D Female 865.9

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

25.1
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 25.1
72129291 Antisense, RP_051017_03_F07, Mouse strain C57BL/6J (56 days, male) 26.6
75750508 Antisense, RP_060518_04_H10, Mouse strain C57BL/6J (56 days, male) 23.6
Pallidum
Expression energy: 13.5
75750508 Antisense, RP_060518_04_H10, Mouse strain C57BL/6J (56 days, male) 14.9
72129291 Antisense, RP_051017_03_F07, Mouse strain C57BL/6J (56 days, male) 12.1

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