HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:40.6 nTPM
HPA Brain:95.6 nTPM
GTEx:40.6 nTPM
FANTOM5:149.6 Scaled Tags Per Million
Pig:72.8 nTPM
Mouse:110.5 nTPM
Allen mouse:8.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044701Antibody HPA048145
Glial cells Not detectedNot detected
Neuronal cells HighHigh




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 95.6
Sample id Sample description nTPM
Hippocampus
nTPM: 84.5
1898 Male, age 80, left hemisphere 98.1
2148 Female, age 91, left hemisphere 87.5
1855 Male, age 76, left hemisphere 87.1
2529 Female, age 94, left hemisphere 81.1
2621 Female, age 67, right hemisphere 81.0
1911 Female, age 85, right hemisphere 72.4
Dentate gyrus
nTPM: 82.9
2010 Male, age 76, both hemispheres 92.9
1927 Female, age 91, both hemispheres 92.4
2246 Female, age 85, both hemispheres 86.8
2530 Female, age 94, left hemisphere 80.3
2531 Female, age 67, both hemispheres 72.6
2528 Male, age 74, both hemispheres 72.4
Entorhinal gyrus
nTPM: 85.4
2764 Male, age 80, right hemisphere 93.3
1938 Female, age 85, left hemisphere 92.7
1787 Male, age 76, left hemisphere 88.2
2613 Female, age 94, left hemisphere 87.0
2117 Female, age 91, right hemisphere 76.9
2686 Male, age 75, right hemisphere 74.4
Hippocampus, CA1
nTPM: 92.7
2749 Male, age 80, left hemisphere 123.1
1873 Female, age 85, both hemispheres 97.9
2045 Male, age 76, both hemispheres 89.5
2527 Male, age 74, both hemispheres 81.4
2082 Female, age 91, right hemisphere 71.4
Hippocampus, CA2
nTPM: 82.7
1963 Male, age 80, left hemisphere 100.0
1892 Male, age 76, both hemispheres 95.4
2437 Female, age 94, left hemisphere 86.8
2249 Male, age 74, both hemispheres 74.9
2113 Female, age 91, right hemisphere 71.9
1940 Female, age 85, left hemisphere 67.3
Hippocampus, CA3
nTPM: 87.2
2620 Female, age 94, left hemisphere 95.1
2137 Male, age 80, left hemisphere 90.5
2861 Female, age 67, both hemispheres 89.3
2436 Male, age 74, both hemispheres 89.1
1867 Male, age 76, both hemispheres 85.1
1891 Female, age 85, both hemispheres 74.0
Parahippocampal cortex
nTPM: 83.1
1850 Male, age 80, both hemispheres 102.0
1990 Female, age 91, right hemisphere 88.0
1933 Female, age 85, both hemispheres 85.1
2245 Female, age 91, both hemispheres 82.4
2532 Female, age 72, left hemisphere 80.9
2622 Female, age 67, right hemisphere 80.8
2693 Female, age 94, both hemispheres 79.7
2250 Female, age 67, right hemisphere 78.8
2018 Male, age 76, both hemispheres 78.1
2692 Male, age 74, both hemispheres 75.1
Perirhinal gyrus
nTPM: 95.6
1847 Female, age 91, left hemisphere 111.9
1794 Male, age 80, right hemisphere 103.2
1841 Female, age 85, right hemisphere 92.9
2521 Female, age 94, right hemisphere 87.4
2848 Male, age 76, right hemisphere 82.8
Subiculum
nTPM: 81.2
2438 Female, age 94, left hemisphere 87.2
2619 Male, age 74, both hemispheres 85.7
1977 Female, age 85, both hemispheres 84.9
1901 Male, age 80, both hemispheres 82.2
2729 Female, age 91, right hemisphere 80.3
2042 Male, age 76, both hemispheres 66.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 40.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 40.6
Samples: 197

Max nTPM: 87.9
Min nTPM: 10.4
Std nTPM: 16.8
Median nTPM: 36.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 87.9
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 86.6
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 84.5
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 82.5
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 78.0
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 77.4
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 76.8
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 76.4
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 76.2
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 75.2
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 74.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 149.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 149.6
FF:10169-103B7 60 years, female 171.3
FF:10153-102I9 76 years, female 128.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 72.8
Pig sample Sample description nTPM
Subiculum
nTPM: 72.8
Samples: 4

Max nTPM: 87.1
Min nTPM: 66.4
Sample A Female 87.1
Sample B Female 70.6
Sample C Male 66.9
Sample D Male 66.4
Dorsal hippocampus
nTPM: 70.8
Samples: 4

Max nTPM: 78.6
Min nTPM: 67.5
Sample A Female 78.6
Sample B Female 68.3
Sample C Male 67.5
Sample D Male 68.6
Entorhinal cortex
nTPM: 69.9
Samples: 4

Max nTPM: 75.8
Min nTPM: 60.1
Sample A Female 68.5
Sample B Female 75.8
Sample C Male 75.1
Sample D Male 60.1
Ventral hippocampus
nTPM: 66.2
Samples: 4

Max nTPM: 74.1
Min nTPM: 62.1
Sample A Female 62.6
Sample B Female 62.1
Sample C Male 74.1
Sample D Male 65.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 110.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 99.9
Samples: 4

Max nTPM: 106.3
Min nTPM: 93.8
Sample A Male 97.7
Sample B Male 93.8
Sample C Female 101.8
Sample D Female 106.3
Hippocampal formation
nTPM: 110.5
Samples: 4

Max nTPM: 126.2
Min nTPM: 102.9
Sample A Male 106.0
Sample B Male 107.0
Sample C Female 126.2
Sample D Female 102.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 8.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.4
378550 Antisense, RP_040625_01_B04, Mouse strain C57BL/6J (56 days, male) 10.0
81599638 Antisense, RP_071203_03_F04, Mouse strain C57BL/6J (56 days, male) 6.8

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