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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:148.2 nTPM
FANTOM5:260.8 Scaled Tags Per Million
Pig:92.3 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA050918Antibody HPA054667
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected

CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

148.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 148.2
Samples: 246

Max nTPM: 275.9
Min nTPM: 91.1
Std nTPM: 30.9
Median nTPM: 143.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 275.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 263.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 256.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 249.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 239.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 238.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 236.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 226.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 222.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 217.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 212.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 204.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 201.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 201.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 200.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 199.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 198.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 194.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 193.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 193.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 191.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 191.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 191.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 188.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 188.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 187.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 187.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 186.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 185.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 185.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 184.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 182.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 180.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 179.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 179.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 178.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 177.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 176.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 176.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 175.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 174.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 173.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 172.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 172.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 171.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 169.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 169.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 169.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 168.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 168.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 167.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 167.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 165.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 164.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 163.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 163.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 162.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 161.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 160.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 160.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 160.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 160.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 159.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 158.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 158.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 158.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 156.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 156.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 156.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 155.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 155.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 155.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 155.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 155.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 154.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 154.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 153.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 153.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 153.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 153.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 153.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 153.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 153.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 153.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 153.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 152.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 152.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 152.5
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 152.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 152.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 152.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 152.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 152.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 151.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 151.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 151.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 149.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 149.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 149.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 149.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 149.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 149.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 148.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 148.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 148.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 147.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 147.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 147.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 147.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 147.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 146.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 146.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 146.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 145.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 145.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 145.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 145.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 145.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 144.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 144.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 144.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 144.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 143.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 143.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 143.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 143.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 143.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 143.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 142.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 142.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 142.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 142.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 142.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 141.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 141.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 141.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 141.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 140.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 140.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 140.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 140.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 140.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 140.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 139.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 139.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 139.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 138.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 137.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 137.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 136.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 136.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 136.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 136.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 135.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 135.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 135.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 135.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 134.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 134.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 134.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 133.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 133.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 133.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 133.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 132.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 132.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 132.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 132.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 132.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 131.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 131.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 131.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 131.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 131.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 131.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 130.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 130.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 130.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 130.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 130.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 130.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 129.7
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 129.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 128.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 127.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 127.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 127.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 127.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 127.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 127.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 126.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 125.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 125.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 125.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 125.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 124.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 124.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 124.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 122.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 122.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 122.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 121.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 121.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 121.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 121.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 121.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 121.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 120.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 120.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 120.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 120.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 120.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 119.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 119.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 118.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 118.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 118.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 118.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 118.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 117.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 117.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 116.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 116.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 115.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 114.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 114.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 114.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 113.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 111.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 110.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 109.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 109.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 107.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 106.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 104.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 103.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 103.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 103.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 102.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 101.8
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 99.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 96.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 95.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 94.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 94.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 91.1
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

260.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 260.8
FF:10164-103B2 76 years, female 260.8

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

92.3
Pig sample Sample description nTPM
Caudate
nTPM: 92.3
Samples: 4

Max nTPM: 109.6
Min nTPM: 84.6
Sample A Female 85.8
Sample B Female 89.2
Sample C Male 109.6
Sample D Male 84.6

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