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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Squamous epithelial cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:201.2 nTPM
GTEx:201.2 nTPM
FANTOM5:1153.7 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA008066Antibody HPA017330Antibody CAB000006
Squamous epithelial cells Not detectedMediumNot detected






VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

201.2
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 201.2
Samples: 156

Max nTPM: 1085.2
Min nTPM: 52.7
Std nTPM: 140.0
Median nTPM: 159.4
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 1085.2
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 564.7
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 549.8
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 506.2
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 488.6
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 475.9
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 461.8
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 457.0
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 452.6
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 452.2
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 451.2
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 439.4
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 413.6
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 410.9
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 407.6
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 400.8
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 396.3
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 390.3
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 386.2
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 377.5
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 354.0
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 342.9
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 342.3
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 338.8
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 338.4
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 331.1
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 321.9
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 318.2
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 309.5
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 309.2
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 308.0
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 299.0
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 295.1
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 286.5
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 281.7
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 280.8
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 276.0
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 274.3
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 267.2
GTEX-16NPV-2526-SM-6M483 50-59 years, female 265.8
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 265.6
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 261.2
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 245.7
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 245.6
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 238.7
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 236.4
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 231.3
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 228.8
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 228.3
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 227.4
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 221.6
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 220.6
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 211.0
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 209.9
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 208.8
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 207.9
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 201.6
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 200.2
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 200.1
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 193.4
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 189.0
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 186.5
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 186.3
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 186.0
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 183.9
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 180.5
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 179.8
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 177.9
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 177.3
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 176.7
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 174.2
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 173.8
GTEX-1C475-0526-SM-793AC 40-49 years, female 169.8
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 166.3
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 165.3
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 164.9
GTEX-QCQG-1226-SM-48U23 50-59 years, female 163.0
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 162.9
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 155.9
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 152.8
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 150.2
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 149.0
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 148.6
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 147.2
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 145.5
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 143.5
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 143.4
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 140.3
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 138.0
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 137.1
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 135.5
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 133.6
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 133.5
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 132.9
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 132.7
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 130.2
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 129.7
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 129.2
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 122.7
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 122.0
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 120.6
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 118.2
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 117.6
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 117.6
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 116.8
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 115.5
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 114.6
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 113.3
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 112.8
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 108.7
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 107.6
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 105.7
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 104.8
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 103.4
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 103.3
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 103.0
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 102.9
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 101.8
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 99.9
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 99.9
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 99.8
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 99.1
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 96.4
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 95.7
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 94.4
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 94.1
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 93.2
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 93.1
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 92.7
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 92.1
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 89.1
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 87.4
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 87.3
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 86.2
GTEX-14PKU-1326-SM-6871B 40-49 years, female 81.1
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 79.8
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 78.5
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 77.3
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 76.8
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 73.8
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 73.8
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 72.6
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 72.0
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 70.9
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 67.9
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 67.4
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 66.6
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 66.1
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 64.7
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 61.0
GTEX-11I78-2026-SM-5987C 50-59 years, female 60.6
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 56.7
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 56.6
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 56.1
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 54.9
GTEX-S341-1226-SM-4AD5S 40-49 years, female 52.7
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1153.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 1153.7
FF:10204-103F6 68 years, female 1153.7

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