PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:128.2 nTPM
FANTOM5:263.9 Scaled Tags Per Million
Pig:67.0 nTPM
Mouse:20.4 nTPM
Allen mouse:0.3 Expression energy

PONS AND MEDULLA - Annotated protein expression
Pending normal tissue analysis

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 128.2
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 108.8
2301 Female, age 85, both hemispheres 141.4
2188 Female, age 91, both hemispheres 110.2
2090 Male, age 80, both hemispheres 106.0
1984 Male, age 76, both hemispheres 77.4
Area postrema
nTPM: 88.5
2306 Male, age 80, both hemispheres 108.6
2799 Male, age 61, both hemispheres 92.7
2054 Male, age 76, both hemispheres 64.3
Dorsal cochlear nucleus
nTPM: 91.6
2187 Female, age 91, both hemispheres 113.5
2378 Male, age 80, both hemispheres 104.3
2370 Male, age 61, both hemispheres 89.3
2802 Male, age 74, right hemisphere 88.2
2058 Male, age 76, both hemispheres 62.7
Dorsal medullary reticular nucleus
nTPM: 87.4
2373 Male, age 61, both hemispheres 99.9
2040 Female, age 85, both hemispheres 81.7
2088 Male, age 76, both hemispheres 80.5
Dorsal motor vagal complex
nTPM: 93.4
2807 Female, age 85, both hemispheres 126.6
2797 Male, age 61, both hemispheres 112.7
2643 Male, age 74, both hemispheres 99.6
2000 Male, age 74, unknown 85.5
2133 Female, age 91, both hemispheres 85.1
2813 Female, age 72, unknown 83.1
2185 Male, age 76, both hemispheres 79.6
2844 Male, age 55, unknown 75.4
Dorsal tegmental nucleus
nTPM: 89.8
2326 Male, age 74, both hemispheres 104.0
2083 Male, age 80, both hemispheres 91.6
1936 Male, age 76, left hemisphere 83.1
2358 Male, age 61, both hemispheres 80.4
Dorsolateral tegmental area
nTPM: 93.1
2337 Male, age 61, both hemispheres 119.4
2654 Male, age 80, both hemispheres 101.5
2751 Female, age 85, both hemispheres 95.6
2360 Male, age 74, both hemispheres 84.7
2141 Male, age 76, both hemispheres 64.2
Gigantocellular reticular nuclei, medullary
nTPM: 91.9
2314 Male, age 61, both hemispheres 136.2
2310 Male, age 80, both hemispheres 95.8
1876 Female, age 85, both hemispheres 82.7
2462 Male, age 74, both hemispheres 79.3
2387 Female, age 91, both hemispheres 79.2
2022 Male, age 76, right hemisphere 78.5
Gigantocellular reticular nuclei, pars
nTPM: 89.2
2336 Male, age 61, both hemispheres 105.2
2330 Male, age 80, both hemispheres 100.8
2706 Male, age 80, both hemispheres 91.3
2084 Female, age 85, both hemispheres 82.0
2168 Male, age 76, both hemispheres 66.8
Inferior olive
nTPM: 119.6
2178 Male, age 61, both hemispheres 130.9
2563 Male, age 74, both hemispheres 120.9
2628 Female, age 91, both hemispheres 120.3
2085 Female, age 85, both hemispheres 114.9
2379 Male, age 80, both hemispheres 110.7
Kolliker-Fuse nucleus
nTPM: 103.5
2315 Male, age 76, right hemisphere 117.3
2793 Female, age 91, left hemisphere 110.1
2163 Male, age 80, both hemispheres 83.0
Lateral lemniscal nuclei
nTPM: 86.5
2320 Female, age 91, left hemisphere 102.4
2746 Female, age 85, left hemisphere 98.0
2453 Male, age 74, right hemisphere 82.2
2169 Male, age 76, both hemispheres 78.7
2036 Male, age 80, both hemispheres 71.5
Lateral medullary reticular nucleus
nTPM: 120.6
2305 Male, age 74, both hemispheres 156.4
2374 Male, age 61, both hemispheres 129.9
2852 Male, age 80, both hemispheres 125.3
2190 Female, age 85, both hemispheres 113.5
2804 Female, age 91, both hemispheres 110.2
2044 Male, age 76, both hemispheres 88.3
Lateral parabrachial nucleus
nTPM: 91.3
2792 Male, age 76, both hemispheres 111.5
2013 Male, age 80, both hemispheres 100.1
2139 Female, age 85, right hemisphere 91.3
2790 Male, age 61, both hemispheres 62.3
Lateral vestibular nucleus
nTPM: 105.2
2311 Male, age 80, both hemispheres 130.5
2184 Male, age 76, both hemispheres 79.8
Locus coeruleus
nTPM: 71.4
2317 Female, age 72, unknown 82.4
2123 Female, age 91, both hemispheres 79.6
2162 Male, age 80, both hemispheres 78.8
2720 Male, age 74, both hemispheres 72.3
2788 Male, age 74, unknown 68.4
2014 Male, age 55, unknown 64.3
1980 Male, age 76, both hemispheres 54.3
Medial olivary nucleus
nTPM: 128.2
1943 Male, age 61, both hemispheres 152.8
1962 Male, age 76, both hemispheres 141.0
2851 Male, age 80, both hemispheres 119.1
2138 Female, age 91, both hemispheres 100.0
Medial parabrachial nucleus
nTPM: 89.2
2170 Female, age 91, both hemispheres 112.6
2854 Male, age 80, both hemispheres 102.5
2786 Male, age 76, both hemispheres 86.2
2463 Female, age 85, right hemisphere 81.0
2156 Male, age 61, both hemispheres 63.8
Medial periolivary nuclei
nTPM: 85.7
2081 Male, age 80, both hemispheres 96.9
2458 Female, age 91, both hemispheres 96.2
2791 Male, age 74, right hemisphere 89.9
2171 Female, age 85, both hemispheres 75.1
2063 Male, age 76, both hemispheres 70.5
Medial vestibular nucleus
nTPM: 91.4
2801 Male, age 74, both hemispheres 112.4
2624 Male, age 61, both hemispheres 110.7
2743 Female, age 85, both hemispheres 89.6
2093 Male, age 80, both hemispheres 89.0
2803 Female, age 91, both hemispheres 83.6
2134 Male, age 76, both hemispheres 63.0
Motor facial nucleus
nTPM: 83.7
2697 Female, age 85, both hemispheres 100.4
2365 Male, age 74, right hemisphere 96.7
2126 Male, age 61, both hemispheres 93.9
2795 Female, age 91, both hemispheres 78.0
2327 Male, age 80, both hemispheres 67.0
2062 Male, age 76, both hemispheres 66.1
Motor hypoglossal nucleus
nTPM: 94.7
2182 Male, age 80, both hemispheres 128.3
2132 Female, age 85, both hemispheres 99.6
2125 Female, age 91, both hemispheres 92.8
2461 Male, age 61, both hemispheres 92.6
2277 Male, age 76, both hemispheres 60.2
Motor trigeminal nucleus
nTPM: 89.7
2321 Female, age 91, both hemispheres 113.0
2560 Male, age 74, both hemispheres 92.7
2335 Male, age 61, both hemispheres 90.0
2309 Male, age 76, both hemispheres 83.7
2079 Male, age 80, both hemispheres 69.0
Nuclei of the trapezoid body
nTPM: 75.7
2166 Male, age 80, both hemispheres 82.8
2368 Female, age 91, both hemispheres 81.5
1983 Male, age 76, both hemispheres 76.0
2159 Male, age 61, both hemispheres 69.7
2735 Female, age 85, both hemispheres 68.3
Nucleus ambiguus
nTPM: 101.7
2071 Male, age 76, both hemispheres 104.2
2096 Female, age 85, both hemispheres 99.3
Nucleus cuneatus
nTPM: 101.5
2808 Female, age 85, both hemispheres 120.0
2381 Male, age 80, both hemispheres 110.2
2380 Male, age 80, both hemispheres 108.9
2376 Male, age 61, both hemispheres 107.3
2564 Male, age 74, both hemispheres 106.6
2100 Male, age 76, both hemispheres 97.3
2562 Male, age 61, both hemispheres 91.1
2805 Female, age 91, both hemispheres 88.2
2131 Male, age 76, both hemispheres 84.0
Nucleus gracilis
nTPM: 114.8
2299 Female, age 85, both hemispheres 123.4
2627 Male, age 74, both hemispheres 113.7
2382 Male, age 80, both hemispheres 107.4
Nucleus raphe magnus
nTPM: 76.1
2328 Male, age 80, both hemispheres 87.5
2051 Male, age 76, both hemispheres 80.2
2455 Male, age 74, both hemispheres 78.6
2459 Female, age 91, both hemispheres 76.9
2172 Female, age 85, both hemispheres 67.5
2160 Male, age 61, both hemispheres 65.9
Nucleus raphe obscurus
nTPM: 110.3
2845 Female, age 85, midline 121.6
2142 Male, age 76, midline 114.6
2800 Male, age 61, midline 94.8
Nucleus raphe pallidus
nTPM: 118.8
2145 Male, age 76, midline 132.1
1924 Male, age 61, midline 120.2
2183 Male, age 80, midline 104.1
Nucleus tractus solitarii
nTPM: 85.1
2191 Female, age 85, both hemispheres 112.1
2307 Male, age 80, both hemispheres 91.9
2144 Female, age 91, right hemisphere 84.1
2656 Male, age 76, both hemispheres 52.3
Paramedian reticular nucleus
nTPM: 85.8
2052 Male, age 76, both hemispheres 93.2
2313 Male, age 61, both hemispheres 92.2
2057 Male, age 80, both hemispheres 81.0
2050 Female, age 85, both hemispheres 76.9
Parvicellular reticular nuclei
nTPM: 88.5
2119 Male, age 80, both hemispheres 91.6
2095 Male, age 76, both hemispheres 90.1
2558 Male, age 74, both hemispheres 83.8
Parvicellular reticular nuclei, medullary
nTPM: 86.2
2091 Female, age 85, both hemispheres 88.1
2189 Female, age 91, both hemispheres 86.3
2181 Male, age 80, left hemisphere 84.2
Pedunculopontine tegmental nucleus
nTPM: 84.1
2334 Male, age 80, both hemispheres 90.8
2338 Male, age 61, both hemispheres 89.2
1921 Female, age 85, both hemispheres 72.4
Peritrigeminal nucleus
nTPM: 107.8
2067 Female, age 85, both hemispheres 115.8
2179 Male, age 61, both hemispheres 108.0
2136 Male, age 76, both hemispheres 99.7
Pontine nuclei
nTPM: 86.6
2319 Female, age 91, both hemispheres 108.5
2115 Male, age 80, left hemisphere 108.1
2109 Female, age 72, unknown 101.5
2454 Male, age 74, left hemisphere 83.3
1863 Male, age 55, unknown 77.4
1968 Male, age 76, left hemisphere 75.3
2787 Female, age 85, both hemispheres 74.2
2727 Male, age 61, right hemisphere 64.5
Pontine raphe nucleus
nTPM: 64.8
2853 Male, age 76, midline 68.1
2122 Female, age 85, midline 61.6
Posteroventral cochlear nucleus
nTPM: 103.1
2341 Male, age 80, both hemispheres 133.9
2135 Female, age 91, both hemispheres 125.7
2371 Male, age 61, both hemispheres 96.9
2070 Male, age 76, both hemispheres 84.9
2752 Female, age 85, both hemispheres 74.2
Prepositus hypoglossal nucleus
nTPM: 96.2
2855 Female, age 85, right hemisphere 97.8
2086 Male, age 80, both hemispheres 94.6
Principal sensory trigeminal nucleus
nTPM: 81.1
2367 Female, age 91, left hemisphere 98.4
2324 Male, age 76, both hemispheres 88.4
2008 Male, age 80, left hemisphere 70.9
2158 Male, age 61, both hemispheres 66.6
Reticular pontine nucleus, caudal
nTPM: 86.0
2457 Female, age 91, both hemispheres 99.2
2559 Male, age 74, both hemispheres 88.7
2092 Male, age 76, both hemispheres 88.3
2332 Male, age 80, right hemisphere 67.8
Reticular pontine nucleus, oral
nTPM: 81.0
2366 Female, age 91, both hemispheres 89.6
2167 Male, age 76, both hemispheres 83.0
1939 Male, age 80, both hemispheres 81.5
2012 Female, age 85, both hemispheres 76.9
2361 Male, age 74, both hemispheres 74.0
Reticulotegmental nucleus
nTPM: 92.3
2322 Female, age 91, both hemispheres 102.1
2333 Male, age 80, both hemispheres 93.1
2452 Male, age 74, both hemispheres 89.7
2325 Male, age 76, both hemispheres 84.2
Spinal trigeminal nucleus, caudal
nTPM: 105.3
2312 Male, age 61, both hemispheres 137.2
2642 Male, age 74, both hemispheres 110.4
2308 Male, age 80, both hemispheres 108.6
2447 Male, age 76, both hemispheres 85.4
2390 Female, age 91, both hemispheres 84.9
Spinal trigeminal nucleus, interpolar
nTPM: 83.7
2033 Male, age 80, both hemispheres 93.5
2389 Female, age 91, both hemispheres 90.5
2625 Male, age 61, both hemispheres 86.4
2386 Female, age 85, both hemispheres 85.9
2066 Male, age 76, right hemisphere 62.3
Spinal trigeminal nucleus, oral
nTPM: 81.0
2164 Male, age 80, both hemispheres 94.3
1978 Male, age 76, both hemispheres 74.7
2737 Female, age 85, both hemispheres 73.9
Spinal vestibular nucleus
nTPM: 87.5
2796 Male, age 61, both hemispheres 98.6
2806 Female, age 85, both hemispheres 92.3
2780 Male, age 80, both hemispheres 89.6
2748 Male, age 76, both hemispheres 83.4
2186 Female, age 91, both hemispheres 80.8
2384 Male, age 74, both hemispheres 80.5
Subcoeruleus area
nTPM: 86.0
2369 Female, age 85, left hemisphere 102.8
2451 Male, age 74, both hemispheres 91.5
1958 Male, age 80, both hemispheres 84.2
2323 Female, age 91, left hemisphere 80.2
2089 Male, age 76, left hemisphere 71.2
Superior olive
nTPM: 90.6
2364 Male, age 74, right hemisphere 100.8
2561 Female, age 91, both hemispheres 96.4
2329 Male, age 80, right hemisphere 95.4
2020 Male, age 76, both hemispheres 89.3
1875 Female, age 85, both hemispheres 71.1
Superior vestibular nucleus
nTPM: 90.4
2015 Male, age 80, both hemispheres 99.0
2061 Male, age 76, both hemispheres 86.4
2383 Male, age 74, both hemispheres 85.9
Ventral medullary reticular nucleus
nTPM: 92.8
2372 Male, age 61, both hemispheres 105.7
2060 Male, age 76, both hemispheres 79.8
Ventral periolivary nuclei
nTPM: 82.7
2023 Male, age 76, both hemispheres 103.9
2794 Female, age 91, left hemisphere 83.2
2165 Male, age 80, both hemispheres 79.3
2130 Female, age 85, both hemispheres 64.3
Ventrolateral medulla, A1-C1 cell groups
nTPM: 109.3
2118 Male, age 80, both hemispheres 125.0
2302 Female, age 91, both hemispheres 115.8
2180 Male, age 61, both hemispheres 115.3
2741 Female, age 85, both hemispheres 96.5
1986 Male, age 76, both hemispheres 93.7
Ventrolateral tegmental area, A5 NE cell group
nTPM: 87.9
2840 Female, age 85, both hemispheres 99.4
2161 Male, age 80, both hemispheres 92.2
2449 Male, age 74, both hemispheres 88.0
2456 Female, age 91, both hemispheres 86.7
1959 Male, age 76, both hemispheres 81.9
2359 Male, age 61, both hemispheres 79.4

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 263.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 248.7
FF:10165-103B3 76 years, female 256.0
FF:10182-103D2 60 years, female 241.4
Medulla oblongata
Scaled Tags Per Million: 263.9
FF:10155-103A2 76 years, female 323.3
FF:10038-101F2 18-64 years, mixed 281.8
FF:10174-103C3 60 years, female 186.7
Pons
Scaled Tags Per Million: 220.4
FF:10033-101E6 18-54 years, mixed 220.4

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 67.0
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 67.0
Samples: 4

Max nTPM: 72.2
Min nTPM: 58.2
Sample A Female 70.6
Sample B Female 58.2
Sample C Male 67.1
Sample D Male 72.2
Pons
nTPM: 53.9
Samples: 4

Max nTPM: 66.4
Min nTPM: 46.8
Sample A Female 47.7
Sample B Female 46.8
Sample C Male 54.7
Sample D Male 66.4

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 20.4
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 20.4
Samples: 4

Max nTPM: 23.1
Min nTPM: 18.3
Sample A Male 23.1
Sample B Male 21.2
Sample C Female 19.1
Sample D Female 18.3

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 0.3
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 0.1
69816506 Antisense, RP_050510_01_C03, Mouse strain C57BL/6J (56 days, male) 0.2
73521802 Antisense, RP_051101_03_A01, Mouse strain C57BL/6J (56 days, male) 0.1
Pons
Expression energy: 0.3
73521802 Antisense, RP_051101_03_A01, Mouse strain C57BL/6J (56 days, male) 0.4
69816506 Antisense, RP_050510_01_C03, Mouse strain C57BL/6J (56 days, male) 0.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org