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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
118.8
nTPM
GTEx:
118.8
nTPM
FANTOM5:
190.1
Scaled Tags Per Million
Pig:
35.4
nTPM
Mouse:
26.5
nTPM
RETINA - Annotated protein expression
Pending normal tissue analysis
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
118.8
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 118.8
Samples: 105
Max nTPM: 268.2
Min nTPM: 51.6
Std nTPM: 43.0
Median nTPM:
491_1
89 years, female
268.2
307_1
66 years, female
226.0
490_1
67 years, female
216.3
308_1
70 years, female
199.8
142_1
61 years, female
195.5
6_1
73 years, female
192.3
139_1
64 years, female
188.4
316_1
62 years, male
186.4
162_1
79 years, female
186.1
322_1
76 years, male
185.2
43_1
64 years, female
182.7
379_1
60 years, male
178.7
447_1
81 years, male
174.3
495_1
57 years, female
173.6
518_1
75 years, female
171.7
375_1
74 years, female
168.4
348_1
84 years, male
167.6
17_1
71 years, male
166.7
35_1
74 years, female
165.2
396_1
62 years, male
156.3
145_1
84 years, male
153.9
501_1
88 years, male
153.9
109_1
81 years, female
152.8
41_1
94 years, female
148.0
137_1
83 years, male
146.5
315_1
62 years, female
143.4
237_1
82 years, male
142.7
354_1
81 years, female
141.0
286_1
68 years, female
139.6
120_1
70 years, female
137.6
217_1
76 years, male
137.0
4_1
88 years, female
136.9
311_1
78 years, male
136.5
313_1
79 years, female
136.4
42_1
85 years, male
136.1
149_1
88 years, male
134.6
218_1
71 years, female
134.5
117_1
61 years, male
133.3
320_1
89 years, female
132.8
81_1
67 years, male
132.1
18_1
88 years, male
130.6
415_1
77 years, female
129.9
414_1
84 years, female
128.2
452_1
88 years, female
126.8
349_1
83 years, male
121.3
386_1
76 years, male
119.8
347_1
72 years, male
118.9
173_1
67 years, male
117.4
32_1
67 years, male
117.3
319_1
81 years, male
116.2
466_1
57 years, female
112.8
314_1
67 years, male
109.5
2_1
77 years, female
109.3
153_1
70 years, female
109.0
384_1
83 years, male
108.5
288_1
66 years, female
106.7
243_1
75 years, male
106.0
318_1
68 years, male
104.1
89_1
63 years, male
103.6
251_1
78 years, male
101.7
229_1
69 years, female
101.5
468_1
89 years, male
100.9
350_1
84 years, female
100.7
351_1
91 years, male
100.3
264_1
73 years, female
99.0
503_1
68 years, male
98.5
119_1
70 years, female
98.2
376_1
75 years, female
96.5
413_1
59 years, female
95.3
265_1
87 years, male
94.1
526_1
61 years, male
93.3
389_1
86 years, female
92.3
353_1
82 years, female
90.3
405_1
91 years, male
90.3
506_1
65 years, male
90.3
352_1
62 years, male
87.9
517_1
88 years, male
87.0
324_1
76 years, male
86.1
189_1
76 years, male
84.9
254_1
77 years, female
84.0
335_1
73 years, female
83.5
126_1
63 years, male
83.1
291_1
76 years, male
81.7
355_1
70 years, female
81.2
295_1
61 years, female
79.7
115_1
83 years, male
78.4
377_1
82 years, female
75.1
425_1
59 years, female
74.4
246_1
77 years, male
74.1
406_1
79 years, male
73.5
292_1
71 years, male
72.5
172_1
72 years, female
69.6
394_1
75 years, female
68.9
404_1
82 years, female
68.4
499_1
55 years, female
68.1
321_1
62 years, female
66.4
317_1
60 years, male
64.8
266_1
85 years, male
64.6
163_1
78 years, male
64.2
480_1
63 years, male
63.2
9_1
66 years, female
61.5
99_1
64 years, male
60.3
177_1
74 years, male
57.5
356_1
87 years, female
54.7
293_1
68 years, female
51.6
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
