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NECAB1
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  • NECAB1
TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
HYPOTHALAMUS - Expression summary
Mouse brain, Intensity
Hypothalamusi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity .

93.663
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:18.2 nTPM
HPA Brain:60.1 nTPM
GTEx:18.2 nTPM
Pig:7.2 nTPM
Mouse:29.8 nTPM
Allen mouse:1.5 Expression energy

HYPOTHALAMUS - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity .

, antibody HPA023629
Hypothalamus mean intensity 93.663
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity .

FRONT BACK
Dorsal tuberomammillary nucleus 6.459
Mammillary nucleus 0.481
Periventricular hypothalamic nucleus 33.096
Supraoptic nucleus 93.663
Tuberal nucleus -
Ventral tuberomammillary nucleus -
Lateral preoptic area 1.956
Medial preoptic area 3.489
Suprachiasmatic nucleus 0.722
Paraventricular hypothalamic nucleus 35.181
Anterior hypothalamic area, central 0.787
Ventral medial hypothalamic nucleus 0.775
Ventral medial hypothalamic nucleus* -
Arcuate nucleus 5.496
Arcuate nucleus* -
Peduncular part of lateral hypothalmus 17.906
Dorsal medial hypothalamic nucleus 10.912
Stria terminalis* -

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

60.1
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 20.1
2226 Male, age 75, left hemisphere 24.6
1961 Female, age 42, unknown 15.6
Dorsomedial nucleus
nTPM: 27.0
1989 Male, age 62, unknown 47.6
2017 Female, age 42, unknown 20.7
2041 Female, age 72, unknown 12.7
Lateral hypothalamic area
nTPM: 60.1
2271 Male, age 75, both hemispheres 101.6
1791 Male, age 80, right hemisphere 60.0
2228 Male, age 66, unknown 53.8
2412 Male, age 62, unknown 24.8
Mammillary body
nTPM: 42.1
1923 Female, age 72, unknown 58.7
1948 Female, age 72, unknown 44.6
1945 Male, age 80, right hemisphere 38.2
1834 Female, age 42, unknown 36.1
2413 Male, age 66, unknown 32.9
Paraventricular nucleus
nTPM: 34.1
2700 Male, age 62, unknown 34.1
Preoptic area
nTPM: 28.8
2414 Female, age 72, unknown 44.2
1907 Male, age 80, right hemisphere 22.3
1861 Female, age 42, unknown 20.0
Supraoptic nucleus
nTPM: 34.2
1894 Female, age 72, unknown 43.4
2043 Male, age 62, unknown 30.7
2835 Female, age 72, unknown 28.4
Ventromedial nucleus
nTPM: 15.0
1822 Female, age 42, unknown 16.6
1982 Female, age 72, unknown 13.4

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

18.2
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 18.2
Samples: 202

Max nTPM: 74.4
Min nTPM: 1.9
Std nTPM: 10.1
Median nTPM: 16.1
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 74.4
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 64.3
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 48.4
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 47.5
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 43.7
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 43.1
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 42.1
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 41.6
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 38.7
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 37.7
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 35.2
GTEX-XLM4-0011-R8A-SM-4AT44 60-69 years, male 34.8
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 34.4
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 34.2
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 33.9
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 33.8
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 33.5
GTEX-OHPN-0011-R8A-SM-33HBT 60-69 years, female 32.3
GTEX-R55E-0011-R8A-SM-2TC66 20-29 years, male 32.3
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 31.8
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 30.7
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 30.6
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 30.5
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 30.0
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 29.5
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 29.1
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 28.7
GTEX-NPJ7-0011-R8a-SM-2I3G2 60-69 years, female 28.0
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 27.8
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 27.2
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 26.4
GTEX-TSE9-0011-R8A-SM-3DB7R 60-69 years, female 25.7
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 25.6
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 25.5
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 25.4
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 24.9
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 24.9
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 24.6
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 24.5
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 24.4
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 24.1
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 24.0
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 24.0
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 23.2
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 23.1
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 23.0
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 22.3
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 22.1
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 22.1
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 22.1
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 22.0
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 22.0
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 21.8
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 21.8
GTEX-18464-0011-R8a-SM-72D4Z 50-59 years, male 21.1
GTEX-QDT8-0011-R8A-SM-32PKE 30-39 years, female 20.8
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 20.8
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 20.8
GTEX-183WM-0011-R8a-SM-7189W 70-79 years, female 20.7
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 20.6
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 20.5
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 20.5
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 20.4
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 20.3
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 20.1
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 20.0
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 19.9
GTEX-RU72-0011-R8A-SM-2TF61 50-59 years, female 19.7
GTEX-N7MT-0011-R8a-SM-2I5GU 60-69 years, female 19.6
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 19.4
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 19.1
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 18.8
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 18.7
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 18.4
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 18.4
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 18.4
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 18.4
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 18.2
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 18.1
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 18.1
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 18.0
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 17.9
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 17.8
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 17.6
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 17.5
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 17.5
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 17.5
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 17.5
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 17.4
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 17.3
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 17.3
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 17.2
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 17.1
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 17.0
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 16.7
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 16.6
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 16.4
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 16.3
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 16.3
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 16.3
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 16.1
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 16.1
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 15.9
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 15.9
GTEX-Q2AG-0011-R8A-SM-2HMK5 40-49 years, female 15.8
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 15.8
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 15.5
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 15.5
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 15.4
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 15.3
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 15.3
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 15.3
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 15.2
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 15.1
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 14.8
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 14.7
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 14.5
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 14.3
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 14.2
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 14.0
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 14.0
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 13.8
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 13.8
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 13.7
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 13.7
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 13.5
GTEX-145MI-0011-R8b-SM-5PNZ9 60-69 years, female 13.5
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 13.5
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 13.5
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 13.5
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 13.2
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 13.0
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 12.9
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 12.7
GTEX-S7SE-0011-R8A-SM-2XCDG 50-59 years, male 12.7
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 12.7
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 12.6
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 12.4
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 12.4
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 12.3
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 12.2
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 12.2
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 11.9
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 11.9
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 11.9
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 11.8
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 11.8
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 11.7
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 11.7
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 11.6
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 11.6
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 11.6
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 11.6
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 11.5
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 11.4
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 11.3
GTEX-13IVO-0011-R8a-SM-5L3DY 70-79 years, male 11.2
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 11.2
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 10.9
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 10.9
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 10.6
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 10.5
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 10.5
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 10.4
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 10.4
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 10.3
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 10.1
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 10.0
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 9.8
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 9.8
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 9.7
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 9.3
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 9.0
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 9.0
GTEX-X4EP-0011-R8B-SM-4QASL 60-69 years, female 8.8
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 8.7
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 8.7
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 8.5
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 8.4
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 8.3
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 8.2
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 8.1
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 8.0
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 8.0
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 8.0
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 7.9
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 7.9
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 7.8
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 7.7
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 7.3
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 7.1
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 7.0
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 6.8
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 6.7
GTEX-13NZ8-0011-R8b-SM-5KM48 60-69 years, female 6.2
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 6.1
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 5.7
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 5.6
GTEX-NL3H-0011-R8a-SM-DIPDY 60-69 years, male 5.2
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 4.8
GTEX-1H3VE-0011-R8b-SM-A9G1L 40-49 years, male 2.9
GTEX-14LLW-0011-R8a-SM-62LFG 70-79 years, female 1.9
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

7.2
Pig sample Sample description nTPM
Hypothalamus
nTPM: 7.2
Samples: 4

Max nTPM: 9.7
Min nTPM: 5.7
Sample A Female 9.7
Sample B Female 7.0
Sample C Male 5.7
Sample D Male 6.3

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

29.8
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 29.8
Samples: 4

Max nTPM: 35.3
Min nTPM: 25.6
Sample A Male 28.9
Sample B Male 29.3
Sample C Female 35.3
Sample D Female 25.6

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.5
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 1.5
69671899 Antisense, RP_050428_02_E12, Mouse strain C57BL/6J (56 days, male) 1.6
72472791 Antisense, RP_051101_02_E09, Mouse strain C57BL/6J (56 days, male) 1.5

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