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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:160.7 nTPM
HPA Brain:131.4 nTPM
GTEx:160.7 nTPM
FANTOM5:164.1 Scaled Tags Per Million
Pig:202.8 nTPM
Mouse:46.0 nTPM
Allen mouse:7.0 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA059965
Glial cells Not detected
Neuronal cells Not detected



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

131.4
Sample id Sample description nTPM
Caudate nucleus
nTPM: 117.4
2846 Female, age 79, unknown 151.7
2288 Male, age 75, left hemisphere 131.9
2290 Female, age 72, unknown 119.8
1781 Male, age 74, unknown 117.8
2481 Female, age 94, left hemisphere 117.3
1857 Female, age 85, left hemisphere 106.1
1854 Male, age 80, left hemisphere 103.2
2289 Male, age 61, right hemisphere 91.2
Globus pallidus, externus
nTPM: 119.6
2772 Female, age 79, unknown 132.4
1996 Male, age 80, right hemisphere 131.2
2395 Male, age 75, both hemispheres 121.7
2646 Male, age 61, right hemisphere 108.4
2567 Female, age 72, unknown 104.4
Globus pallidus, internus
nTPM: 131.4
2287 Male, age 75, right hemisphere 164.2
2483 Female, age 94, right hemisphere 153.9
2566 Female, age 72, unknown 124.7
1818 Male, age 74, unknown 124.2
2778 Female, age 91, both hemispheres 121.3
2111 Female, age 85, right hemisphere 116.1
2037 Male, age 80, right hemisphere 115.4
Nucleus accumbens
nTPM: 108.5
2698 Female, age 72, unknown 147.6
1783 Male, age 74, unknown 123.5
2286 Male, age 75, left hemisphere 120.1
1806 Female, age 85, left hemisphere 108.9
1856 Female, age 91, right hemisphere 104.7
2391 Female, age 94, left hemisphere 98.7
2732 Male, age 80, right hemisphere 85.1
2824 Male, age 61, right hemisphere 79.6
Nucleus basalis of Meynert
nTPM: 111.3
2821 Male, age 75, both hemispheres 139.6
2484 Female, age 94, left hemisphere 108.0
2569 Male, age 61, both hemispheres 101.5
2393 Male, age 80, right hemisphere 96.0
Nucleus of the diagonal band
nTPM: 105.7
1812 Female, age 91, both hemispheres 118.9
2775 Male, age 80, right hemisphere 107.5
2195 Female, age 85, both hemispheres 106.3
1979 Male, age 74, unknown 102.8
2029 Male, age 61, right hemisphere 93.0
Putamen
nTPM: 114.5
2647 Male, age 75, left hemisphere 138.8
2482 Female, age 94, left hemisphere 122.7
1829 Male, age 74, unknown 115.6
2466 Female, age 79, unknown 114.8
1838 Male, age 80, right hemisphere 106.5
2489 Female, age 72, unknown 102.1
1937 Female, age 91, right hemisphere 101.0
Septal nuclei
nTPM: 92.9
1960 Male, age 74, unknown 109.8
2629 Female, age 94, right hemisphere 105.6
2031 Female, age 72, unknown 96.5
2009 Female, age 91, both hemispheres 92.5
2199 Male, age 80, right hemisphere 88.3
2059 Female, age 85, both hemispheres 83.9
2394 Male, age 61, left hemisphere 74.0
Stria terminalis, bed nucleus
nTPM: 89.5
1974 Female, age 91, both hemispheres 108.1
2201 Male, age 74, unknown 87.2
2486 Female, age 94, both hemispheres 73.3

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

160.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 141.7
Samples: 246

Max nTPM: 284.5
Min nTPM: 58.5
Std nTPM: 35.6
Median nTPM: 138.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 284.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 273.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 268.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 254.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 247.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 243.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 243.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 235.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 231.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 226.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 221.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 216.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 208.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 201.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 199.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 196.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 196.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 192.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 191.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 191.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 189.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 182.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 181.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 180.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 180.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 179.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 179.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 178.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 175.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 174.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 174.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 173.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 169.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 168.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 167.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 167.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 166.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 166.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 165.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 165.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 165.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 165.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 165.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 165.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 163.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 163.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 162.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 162.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 161.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 161.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 161.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 159.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 159.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 159.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 158.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 157.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 157.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 157.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 156.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 156.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 156.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 156.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 156.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 155.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 153.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 153.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 153.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 153.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 153.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 152.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 152.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 152.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 152.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 151.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 151.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 151.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 151.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 151.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 150.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 150.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 149.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 149.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 149.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 149.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 149.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 148.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 148.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 147.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 147.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 147.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 147.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 147.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 147.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 147.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 147.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 146.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 146.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 145.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 145.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 145.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 145.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 144.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 144.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 144.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 144.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 143.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 143.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 143.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 143.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 142.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 142.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 141.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 141.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 141.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 141.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 141.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 141.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 140.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 139.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 139.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 139.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 139.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 138.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 138.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 138.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 138.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 138.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 138.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 137.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 137.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 137.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 137.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 136.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 136.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 136.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 136.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 135.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 135.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 135.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 134.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 134.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 134.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 133.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 133.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 133.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 133.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 133.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 132.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 132.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 132.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 132.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 131.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 130.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 130.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 130.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 130.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 130.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 130.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 129.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 129.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 129.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 128.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 128.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 127.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 127.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 127.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 126.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 126.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 126.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 124.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 124.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 123.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 123.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 123.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 123.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 123.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 123.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 123.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 122.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 122.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 121.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 120.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 120.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 120.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 120.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 120.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 120.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 120.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 119.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 119.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 119.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 119.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 118.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 118.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 117.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 117.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 117.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 116.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 116.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 115.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 114.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 114.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 114.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 114.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 113.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 113.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 113.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 113.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 113.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 112.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 112.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 112.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 111.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 111.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 111.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 109.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 109.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 108.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 108.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 107.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 106.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 106.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 106.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 106.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 106.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 105.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 104.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 102.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 94.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 92.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 91.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 90.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 86.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 84.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 83.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 82.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 80.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 77.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 77.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 76.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 73.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 72.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 68.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 67.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 60.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 58.5
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 146.3
Samples: 246

Max nTPM: 278.3
Min nTPM: 60.2
Std nTPM: 38.1
Median nTPM: 141.9
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 278.3
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 264.4
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 259.9
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 248.1
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 247.9
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 245.3
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 230.3
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 226.1
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 225.4
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 219.0
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 215.5
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 214.6
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 213.2
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 211.5
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 211.0
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 208.6
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 208.4
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 205.7
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 205.4
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 202.5
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 199.6
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 195.5
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 193.7
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 193.2
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 193.1
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 192.5
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 191.8
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 190.2
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 189.3
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 189.0
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 186.8
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 186.8
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 186.5
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 186.0
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 185.7
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 185.0
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 184.7
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 184.3
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 181.7
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 181.5
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 181.4
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 180.8
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 180.3
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 180.1
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 180.0
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 179.3
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 178.4
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 178.0
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 177.8
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 177.7
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 176.3
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 175.7
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 175.3
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 174.8
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 174.8
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 174.8
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 174.8
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 174.5
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 173.4
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 172.8
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 171.9
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 171.7
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 169.7
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 169.2
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 167.5
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 166.5
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 165.2
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 164.5
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 164.3
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 164.1
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 164.1
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 164.0
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 163.6
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 163.6
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 163.4
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 161.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 161.7
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 161.6
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 161.5
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 160.9
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 159.6
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 159.2
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 158.7
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 158.1
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 158.0
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 157.8
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 156.9
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 156.8
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 156.4
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 156.3
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 156.0
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 156.0
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 155.9
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 155.1
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 154.8
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 154.8
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 154.2
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 153.1
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 152.8
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 152.2
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 152.1
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 152.0
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 151.1
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 150.3
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 150.1
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 150.0
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 149.4
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 149.1
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 147.7
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 147.4
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 146.8
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 146.6
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 146.2
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 146.1
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 145.7
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 145.3
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 145.2
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 144.6
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 143.5
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 143.4
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 143.4
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 142.8
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 142.0
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 141.9
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 141.7
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 141.6
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 141.5
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 140.0
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 139.9
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 139.7
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 139.1
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 139.0
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 138.8
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 138.3
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 137.9
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 137.4
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 137.3
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 136.9
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 136.8
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 136.5
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 135.8
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 135.4
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 135.2
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 135.2
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 134.9
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 134.2
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 134.0
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 133.7
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 133.7
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 133.2
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 133.1
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 132.0
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 132.0
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 131.3
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 130.0
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 129.9
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 129.9
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 129.3
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 128.9
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 128.5
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 128.2
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 128.2
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 128.0
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 127.9
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 127.5
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 127.0
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 126.9
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 126.9
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 126.6
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 126.5
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 125.7
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 125.4
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 125.2
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 124.2
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 123.9
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 123.8
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 123.6
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 122.5
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 122.2
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 121.9
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 121.7
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 121.0
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 120.6
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 120.2
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 119.6
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 119.2
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 118.8
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 118.2
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 118.1
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 118.1
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 117.7
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 117.6
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 117.2
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 117.0
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 116.4
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 115.8
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 115.0
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 114.8
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 113.8
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 113.2
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 113.1
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 112.4
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 111.5
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 111.0
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 111.0
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 110.4
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 110.4
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 109.2
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 108.5
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 108.3
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 108.0
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 107.9
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 106.5
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 106.4
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 105.8
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 105.6
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 104.6
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 104.1
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 102.6
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 101.8
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 101.5
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 100.9
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 100.6
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 99.2
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 98.4
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 96.9
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 95.2
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 95.1
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 95.1
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 94.5
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 94.3
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 93.7
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 92.0
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 90.4
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 89.5
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 86.5
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 85.6
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 83.1
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 83.1
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 82.8
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 80.4
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 80.4
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 69.7
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 66.7
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 64.5
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 60.2
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Brain - Putamen (basal ganglia)
Average nTPM: 160.7
Samples: 205

Max nTPM: 304.2
Min nTPM: 60.3
Std nTPM: 34.9
Median nTPM: 159.6
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 304.2
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 284.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 271.8
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 251.8
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 244.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 238.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 237.3
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 231.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 224.5
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 221.8
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 220.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 219.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 217.7
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 214.8
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 208.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 208.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 206.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 205.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 204.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 203.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 202.6
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 200.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 200.2
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 198.1
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 197.9
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 197.4
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 197.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 195.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 195.6
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 193.0
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 189.3
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 188.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 187.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 187.1
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 185.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 185.2
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 184.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 183.9
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 183.7
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 182.6
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 182.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 182.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 181.9
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 181.7
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 180.5
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 179.6
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 179.6
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 179.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 179.2
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 178.6
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 178.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 177.8
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 177.8
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 177.4
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 177.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 176.8
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 176.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 176.7
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 176.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 176.0
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 175.8
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 175.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 175.0
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 174.8
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 174.3
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 174.3
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 174.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 173.7
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 173.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 172.9
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 172.6
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 171.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 170.0
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 169.2
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 168.9
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 168.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 167.7
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 167.6
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 167.4
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 166.8
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 166.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 166.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 166.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 166.0
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 165.9
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 165.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 165.2
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 165.1
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 164.8
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 163.8
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 163.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 163.6
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 163.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 163.0
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 162.9
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 162.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 162.2
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 161.9
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 160.4
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 160.4
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 160.3
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 160.1
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 159.6
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 159.4
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 159.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 158.8
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 158.7
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 158.3
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 158.3
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 157.9
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 157.6
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 156.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 155.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 155.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 154.7
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 153.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 153.3
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 153.3
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 153.3
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 152.1
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 151.8
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 151.7
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 150.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 149.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 149.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 148.1
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 148.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 147.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 147.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 146.7
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 146.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 146.4
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 146.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 146.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 145.8
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 145.6
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 145.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 144.7
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 144.5
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 144.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 143.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 143.6
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 142.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 142.3
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 141.9
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 141.8
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 141.6
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 141.6
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 141.2
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 140.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 140.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 140.0
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 139.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 139.9
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 139.4
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 139.1
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 137.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 137.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 137.3
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 137.3
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 136.8
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 136.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 136.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 136.0
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 135.9
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 134.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 133.0
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 133.0
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 132.5
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 132.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 131.1
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 130.9
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 130.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 129.4
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 129.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 128.3
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 128.0
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 125.4
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 125.0
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 124.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 123.2
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 121.4
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 121.2
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 120.8
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 118.4
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 116.4
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 115.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 114.1
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 113.0
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 112.3
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 112.0
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 110.5
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 110.3
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 109.5
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 108.2
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 107.7
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 107.4
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 106.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 102.7
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 102.0
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 97.6
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 97.0
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 87.1
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 76.3
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 60.3
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

164.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 164.1
FF:10164-103B2 76 years, female 164.1
Nucleus accumbens
Scaled Tags Per Million: 140.6
FF:10037-101F1 23-56 years, mixed 140.6
Putamen
Scaled Tags Per Million: 128.9
FF:10176-103C5 60 years, female 128.9
Globus pallidus
Scaled Tags Per Million: 140.1
FF:10161-103A8 76 years, female 150.7
FF:10175-103C4 60 years, female 129.4

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

202.8
Pig sample Sample description nTPM
Caudate
nTPM: 166.9
Samples: 4

Max nTPM: 201.4
Min nTPM: 135.4
Sample A Female 135.4
Sample B Female 181.2
Sample C Male 201.4
Sample D Male 149.6
Putamen
nTPM: 202.8
Samples: 4

Max nTPM: 234.1
Min nTPM: 183.9
Sample A Female 183.9
Sample B Female 187.9
Sample C Male 234.1
Sample D Male 205.4
Septum
nTPM: 153.0
Samples: 4

Max nTPM: 165.8
Min nTPM: 136.8
Sample A Female 165.8
Sample B Female 162.9
Sample C Male 136.8
Sample D Male 146.3
Ventral pallidum
nTPM: 156.5
Samples: 4

Max nTPM: 192.9
Min nTPM: 129.7
Sample A Female 129.7
Sample B Female 192.9
Sample C Male 150.8
Sample D Male 152.6

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

46.0
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 38.9
Samples: 4

Max nTPM: 41.6
Min nTPM: 36.5
Sample A Male 37.3
Sample B Male 41.6
Sample C Female 40.0
Sample D Female 36.5
Septum
nTPM: 46.0
Samples: 4

Max nTPM: 49.3
Min nTPM: 44.1
Sample A Male 44.1
Sample B Male 46.4
Sample C Female 49.3
Sample D Female 44.2
Ventral forebrain
nTPM: 41.0
Samples: 4

Max nTPM: 44.1
Min nTPM: 38.6
Sample A Male 42.5
Sample B Male 38.7
Sample C Female 44.1
Sample D Female 38.6

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

7.0
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 7.0
67814203 Antisense, RP_040920_01_F03, Mouse strain C57BL/6J (56 days, male) 7.0
Pallidum
Expression energy: 6.4
67814203 Antisense, RP_040920_01_F03, Mouse strain C57BL/6J (56 days, male) 6.4

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