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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PFDN5 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average pTPM
473.2
Number of samples
64
Samples
Sample
Description
pTPM
TCGA-KN-8427-01A
54 years, male, white, stage:Stage IV, alive, 30 days
977.6
TCGA-KL-8339-01A
67 years, male, white, stage:Stage IV, dead, 855 days
900.6
TCGA-KO-8404-01A
78 years, male, white, stage:Stage IV, dead, 325 days
892.5
TCGA-KO-8417-01A
30 years, female, white, stage:Stage I, alive, 2815 days
712.2
TCGA-KO-8408-01A
47 years, male, white, stage:Stage III, dead, 507 days
708.3
TCGA-KL-8327-01A
46 years, female, white, stage:Stage I, alive, 4169 days
629.7
TCGA-KN-8421-01A
47 years, female, white, stage:Stage II, alive, 2674 days
628.5
TCGA-KL-8326-01A
69 years, male, white, stage:Stage III, alive, 3322 days
619.2
TCGA-KL-8344-01A
51 years, male, white, stage:Stage III, alive, 876 days
595.7
TCGA-KN-8432-01A
86 years, female, white, stage:Stage II, alive, 76 days
583.3
TCGA-KN-8436-01A
62 years, male, white, stage:Stage II, alive, 1288 days
576.8
TCGA-KO-8406-01A
17 years, female, white, stage:Stage I, alive, 3145 days
564.3
TCGA-KL-8328-01A
60 years, male, white, stage:Stage II, alive, 3127 days
561.1
TCGA-KO-8411-01A
58 years, male, white, stage:Stage I, alive, 3958 days
556.7
TCGA-KN-8435-01A
59 years, male, white, stage:Stage II, alive, 3498 days
555.2
TCGA-KN-8418-01A
41 years, female, white, stage:Stage II, alive, 3935 days
550.6
TCGA-KL-8334-01A
37 years, female, white, stage:Stage III, alive, 2949 days
535.4
TCGA-KL-8329-01A
57 years, female, asian, stage:Stage I, alive, 2752 days
523.4
TCGA-KN-8428-01A
71 years, male, white, stage:Stage II, dead, 1590 days
521.1
TCGA-KL-8325-01A
56 years, female, white, stage:Stage II, dead, 725 days
518.8
TCGA-KN-8429-01A
38 years, female, white, stage:Stage III, alive, 2650 days
517.8
TCGA-KM-8476-01A
47 years, male, white, stage:Stage I, alive, 3745 days
515.8
TCGA-KO-8415-01A
44 years, female, white, stage:Stage I, alive, 2939 days
512.6
TCGA-KL-8330-01A
44 years, female, black or african american, stage:Stage II, alive, 3304 days
503.9
TCGA-KO-8407-01A
42 years, male, white, stage:Stage II, alive, 2820 days
503.2
TCGA-KO-8409-01A
69 years, male, white, stage:Stage II, alive, 3180 days
489.2
TCGA-KM-8442-01A
38 years, male, stage:Stage II, alive, 1437 days
482.7
TCGA-KL-8346-01A
62 years, male, white, stage:Stage II, alive, 1897 days
474.6
TCGA-KL-8343-01A
72 years, male, white, stage:Stage III, dead, 2172 days
465.2
TCGA-KL-8340-01A
34 years, male, white, stage:Stage II, alive, 2024 days
462.4
TCGA-KL-8336-01A
51 years, female, white, stage:Stage IV, dead, 920 days
462.4
TCGA-KL-8324-01A
67 years, female, white, stage:Stage II, alive, 4676 days
458.5
TCGA-KL-8341-01A
41 years, male, asian, stage:Stage IV, dead, 754 days
457.8
TCGA-KM-8443-01A
57 years, male, white, stage:Stage II, alive, 1520 days
457.7
TCGA-KL-8338-01A
51 years, male, white, stage:Stage III, alive, 2633 days
443.5
TCGA-KO-8414-01A
50 years, female, white, stage:Stage II, alive, 3212 days
442.1
TCGA-KO-8410-01A
74 years, female, white, stage:Stage I, alive, 3136 days
439.2
TCGA-KO-8405-01A
29 years, male, white, stage:Stage III, alive, 3056 days
430.6
TCGA-KL-8337-01A
26 years, male, black or african american, stage:Stage II, alive, 1364 days
427.2
TCGA-KL-8333-01A
69 years, male, white, stage:Stage II, alive, 2991 days
425.5
TCGA-KL-8342-01A
45 years, female, white, stage:Stage II, alive, 2248 days
425.3
TCGA-KL-8345-01A
75 years, male, white, stage:Stage III, alive, 1665 days
417.9
TCGA-KO-8413-01A
46 years, male, white, stage:Stage I, alive, 3038 days
412.2
TCGA-KM-8639-01A
67 years, male, white, stage:Stage I, alive, 953 days
408.1
TCGA-KN-8424-01A
42 years, female, white, stage:Stage I, alive, 1983 days
405.4
TCGA-KO-8403-01A
49 years, male, white, stage:Stage I, alive, 3208 days
397.1
TCGA-KL-8331-01A
48 years, female, white, stage:Stage II, alive, 3010 days
395.7
TCGA-KM-8439-01A
30 years, male, white, stage:Stage I, alive, 708 days
389.1
TCGA-KL-8335-01A
67 years, male, white, stage:Stage III, alive, 2815 days
376.1
TCGA-KM-8440-01A
37 years, male, black or african american, stage:Stage III, alive, 1366 days
372.0
TCGA-KN-8423-01A
44 years, male, white, stage:Stage I, alive, 788 days
370.8
TCGA-KL-8332-01A
55 years, male, white, stage:Stage I, alive, 2582 days
354.8
TCGA-KM-8441-01A
61 years, female, white, stage:Stage I, alive, 876 days
345.5
TCGA-KM-8438-01A
45 years, female, white, stage:Stage II, alive, 4622 days
334.1
TCGA-KN-8434-01A
65 years, female, white, stage:Stage II, alive, 1797 days
333.7
TCGA-KL-8323-01A
57 years, female, white, stage:Stage III, dead, 1158 days
328.0
TCGA-KO-8416-01A
41 years, male, white, stage:Stage III, alive, 2752 days
323.1
TCGA-KN-8426-01A
50 years, male, white, stage:Stage IV, alive, 108 days
296.6
TCGA-KN-8425-01A
53 years, male, white, stage:Stage I, alive, 3179 days
289.7
TCGA-KN-8431-01A
35 years, female, stage:Stage II, alive, 588 days
272.9
TCGA-KN-8433-01A
46 years, female, white, stage:Stage III, alive, 341 days
261.8
TCGA-KM-8477-01A
56 years, male, white, stage:Stage I, alive, 1553 days
232.5
TCGA-KN-8437-01A
42 years, female, white, stage:Stage I, alive, 3068 days
231.5
TCGA-KN-8419-01A
43 years, male, black or african american, stage:Stage II, alive, 714 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PFDN5 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average pTPM
1040.8
Number of samples
521
Samples
Sample
Description
pTPM
TCGA-B0-5702-01A
71 years, male, white, stage:Stage I, alive, 2172 days
6455.8
TCGA-AK-3458-01A
48 years, male, white, stage:Stage I, alive, 1168 days
3670.7
TCGA-B0-4821-01A
68 years, female, asian, stage:Stage III, dead, 1230 days
2367.5
TCGA-B8-4154-01A
73 years, female, white, stage:Stage I, alive, 1380 days
2329.9
TCGA-AK-3436-01A
40 years, male, white, stage:Stage IV, alive, 3331 days
2316.1
TCGA-AK-3427-01A
65 years, male, white, stage:Stage I, alive, 3583 days
2275.2
TCGA-AK-3451-01A
48 years, male, white, stage:Stage II, alive, 2868 days
2188.6
TCGA-B2-4099-01A
83 years, male, white, stage:Stage I, alive, 972 days
2182.2
TCGA-AK-3428-01A
62 years, male, white, stage:Stage III, alive, 3728 days
2171.7
TCGA-CW-6090-01A
68 years, male, white, stage:Stage I, alive, 2552 days
2140.8
TCGA-A3-3306-01A
67 years, male, white, stage:Stage I, alive, 1120 days
2108.2
TCGA-G6-A8L6-01A
55 years, male, black or african american, stage:Stage IV, dead, 313 days
2074.1
TCGA-B0-5107-01A
65 years, female, white, stage:Stage IV, dead, 927 days
1959.9
TCGA-BP-4329-01A
75 years, male, white, stage:Stage III, dead, 845 days
1899.6
TCGA-B0-4691-01A
55 years, male, white, stage:Stage IV, dead, 139 days
1887.4
TCGA-DV-A4VX-01A
59 years, male, black or african american, stage:Stage IV, dead, 1626 days
1829.4
TCGA-BP-4174-01A
49 years, male, white, stage:Stage II, alive, 1879 days
1828.0
TCGA-AK-3455-01A
71 years, female, white, stage:Stage III, dead, 683 days
1817.9
TCGA-B2-5633-01A
56 years, male, white, stage:Stage I, alive, 963 days
1803.2
TCGA-B0-5100-01A
72 years, male, black or african american, stage:Stage III, dead, 1913 days
1802.3
TCGA-AK-3431-01A
62 years, female, white, stage:Stage II, dead, 2241 days
1791.3
TCGA-B8-A54F-01A
49 years, female, black or african american, stage:Stage I, alive, 519 days
1726.4
TCGA-BP-5170-01A
55 years, male, white, stage:Stage I, alive, 2412 days
1705.9
TCGA-CZ-5467-01A
86 years, female, white, stage:Stage III, dead, 73 days
1686.9
TCGA-CZ-5454-01A
63 years, male, white, stage:Stage IV, dead, 722 days
1672.1
TCGA-AK-3425-01A
68 years, male, white, stage:Stage I, alive, 3343 days
1657.1
TCGA-AK-3429-01A
54 years, female, white, stage:Stage II, alive, 3328 days
1624.3
TCGA-B8-4151-01A
51 years, female, white, stage:Stage III, alive, 1299 days
1619.3
TCGA-CZ-5469-01A
41 years, male, white, stage:Stage II, dead, 946 days
1609.8
TCGA-B0-5120-01A
72 years, female, white, stage:Stage I, alive, 1169 days
1603.9
TCGA-CW-5588-01A
78 years, female, white, stage:Stage I, alive, 2017 days
1560.9
TCGA-B0-5094-01A
62 years, male, white, stage:Stage IV, dead, 333 days
1551.9
TCGA-BP-5173-01A
75 years, male, white, stage:Stage I, dead, 62 days
1547.2
TCGA-3Z-A93Z-01A
69 years, male, black or african american, stage:Stage I, alive, 385 days
1546.4
TCGA-B0-4823-01A
88 years, male, white, stage:Stage I, dead, 454 days
1546.1
TCGA-A3-3383-01A
52 years, male, white, stage:Stage I, alive, 861 days
1544.9
TCGA-MM-A564-01A
68 years, male, black or african american, stage:Stage II, alive, 607 days
1530.8
TCGA-B2-3924-01A
73 years, male, white, stage:Stage I, alive, 1092 days
1523.7
TCGA-CJ-5678-01A
62 years, male, black or african american, stage:Stage IV, dead, 574 days
1523.2
TCGA-BP-4176-01A
64 years, male, white, stage:Stage I, alive, 1955 days
1489.5
TCGA-BP-4177-01A
65 years, male, white, stage:Stage I, alive, 1670 days
1464.2
TCGA-CJ-4870-01A
58 years, female, black or african american, stage:Stage III, alive, 1498 days
1460.4
TCGA-B8-4143-01A
66 years, female, white, stage:Stage IV, dead, 709 days
1460.1
TCGA-B0-5116-01A
52 years, male, white, stage:Stage III, alive, 1274 days
1459.5
TCGA-AK-3426-01A
37 years, male, white, stage:Stage III, dead, 885 days
1459.4
TCGA-B0-5696-01A
69 years, male, white, stage:Stage III, alive, 2609 days
1458.4
TCGA-AK-3450-01A
85 years, female, white, stage:Stage I, alive, 1508 days
1458.4
TCGA-CZ-5465-01A
76 years, female, stage:Stage III, dead, 2564 days
1451.5
TCGA-CZ-5461-01A
52 years, male, white, stage:Stage IV, dead, 330 days
1449.1
TCGA-BP-4763-01A
79 years, female, white, stage:Stage I, dead, 1270 days
1440.7
TCGA-BP-5196-01A
53 years, male, white, stage:Stage I, alive, 1018 days
1435.6
TCGA-B0-4718-01A
57 years, male, white, stage:Stage III, alive, 1778 days
1425.4
TCGA-A3-3365-01A
46 years, male, white, stage:Stage I, alive, 873 days
1424.3
TCGA-A3-3382-01A
69 years, male, white, stage:Stage I, alive, 574 days
1417.5
TCGA-AK-3434-01A
72 years, male, white, stage:Stage I, alive, 2087 days
1416.9
TCGA-A3-3329-01A
75 years, male, white, stage:Stage I, alive, 1624 days
1403.9
TCGA-BP-5192-01A
59 years, male, white, stage:Stage I, alive, 714 days
1401.4
TCGA-BP-4163-01A
60 years, female, white, stage:Stage III, alive, 2839 days
1400.9
TCGA-BP-4159-01A
70 years, male, white, stage:Stage I, dead, 2601 days
1398.6
TCGA-B0-4706-01A
61 years, male, white, stage:Stage III, dead, 65 days
1392.4
TCGA-B0-4712-01A
76 years, male, white, stage:Stage IV, dead, 1337 days
1389.5
TCGA-BP-4968-01A
40 years, male, white, stage:Stage I, alive, 1746 days
1385.6
TCGA-BP-4761-01A
57 years, male, white, stage:Stage III, alive, 182 days
1383.3
TCGA-BP-4762-01A
42 years, male, white, stage:Stage I, dead, 1343 days
1380.1
TCGA-CJ-6033-01A
54 years, female, white, stage:Stage IV, dead, 224 days
1377.2
TCGA-A3-3352-01A
74 years, male, white, stage:Stage III, dead, 561 days
1377.2
TCGA-A3-A6NI-01A
47 years, male, black or african american, stage:Stage I, alive, 1018 days
1362.7
TCGA-CJ-4892-01A
65 years, female, white, stage:Stage I, alive, 1521 days
1362.6
TCGA-B0-4694-01A
72 years, male, white, stage:Stage III, dead, 106 days
1360.2
TCGA-BP-4165-01A
64 years, female, white, stage:Stage I, alive, 3037 days
1359.5
TCGA-B0-5113-01A
69 years, female, white, stage:Stage III, alive, 1175 days
1357.9
TCGA-BP-5180-01A
53 years, male, white, stage:Stage I, alive, 2263 days
1341.3
TCGA-MW-A4EC-01A
72 years, female, black or african american, stage:Stage I, alive, 498 days
1335.3
TCGA-BP-4758-01A
40 years, male, white, stage:Stage I, alive, 2208 days
1334.1
TCGA-AK-3447-01A
83 years, male, white, stage:Stage II, alive, 1217 days
1334.0
TCGA-AK-3460-01A
58 years, male, white, stage:Stage I, alive, 2508 days
1332.5
TCGA-CW-5590-01A
51 years, male, white, stage:Stage IV, dead, 1075 days
1323.3
TCGA-BP-4170-01A
72 years, female, white, stage:Stage I, dead, 2343 days
1316.1
TCGA-B8-5159-01A
61 years, female, white, stage:Stage I, alive, 722 days
1314.2
TCGA-BP-4789-01A
48 years, male, white, stage:Stage I, alive, 1489 days
1302.8
TCGA-B0-5098-01A
53 years, female, black or african american, stage:Stage I, dead, 1584 days
1301.9
TCGA-A3-3380-01A
54 years, male, stage:Stage I, alive, 567 days
1300.9
TCGA-B0-4811-01A
48 years, male, white, stage:Stage III, dead, 1417 days
1291.4
TCGA-BP-4355-01A
59 years, female, white, stage:Stage III, dead, 953 days
1288.1
TCGA-BP-4351-01A
51 years, female, white, stage:Stage III, alive, 970 days
1288.1
TCGA-CJ-4873-01A
85 years, female, white, stage:Stage III, alive, 1776 days
1286.2
TCGA-BP-4770-01A
73 years, female, white, stage:Stage IV, dead, 329 days
1285.6
TCGA-B0-4813-01A
68 years, male, white, stage:Stage III, dead, 18 days
1282.0
TCGA-B0-5095-01A
81 years, male, white, stage:Stage III, dead, 245 days
1281.7
TCGA-B0-5695-01A
61 years, female, white, stage:Stage I, alive, 2150 days
1278.8
TCGA-B0-4814-01A
58 years, male, white, stage:Stage IV, dead, 168 days
1276.8
TCGA-BP-4166-01A
69 years, male, white, stage:Stage III, alive, 13 days
1272.3
TCGA-CJ-4885-01A
64 years, male, white, stage:Stage IV, alive, 3451 days
1254.2
TCGA-CZ-4860-01A
60 years, male, white, stage:Stage IV, dead, 206 days
1253.7
TCGA-B0-5700-01A
77 years, male, white, stage:Stage I, alive, 1790 days
1246.2
TCGA-CJ-5684-01A
61 years, male, white, stage:Stage III, alive, 2231 days
1244.8
TCGA-B0-4839-01A
80 years, female, white, stage:Stage I, dead, 1639 days
1237.1
TCGA-EU-5905-01A
67 years, female, white, stage:Stage I, alive, 119 days
1234.1
TCGA-BP-5168-01A
75 years, male, white, stage:Stage I, dead, 1463 days
1232.3
TCGA-BP-4167-01A
59 years, male, white, stage:Stage III, alive, 2718 days
1231.1
TCGA-BP-4776-01A
52 years, male, white, stage:Stage I, alive, 411 days
1225.8
TCGA-CZ-4854-01A
68 years, male, white, stage:Stage I, dead, 1404 days
1224.7
TCGA-BP-4162-01A
65 years, female, white, stage:Stage I, alive, 3074 days
1224.6
TCGA-B0-5402-01A
64 years, male, white, stage:Stage IV, alive, 1290 days
1222.7
TCGA-CJ-4881-01A
41 years, male, white, stage:Stage III, alive, 2014 days
1222.3
TCGA-BP-4353-01A
61 years, male, white, stage:Stage I, dead, 375 days
1217.9
TCGA-BP-4782-01A
55 years, female, white, stage:Stage I, alive, 354 days
1213.3
TCGA-BP-4160-01A
67 years, male, white, stage:Stage III, alive, 2881 days
1205.7
TCGA-A3-A6NL-01A
49 years, female, black or african american, stage:Stage I, alive, 689 days
1198.9
TCGA-B0-5084-01A
33 years, male, white, stage:Stage IV, dead, 222 days
1193.1
TCGA-B8-4620-01A
70 years, female, white, stage:Stage III, alive, 777 days
1191.1
TCGA-CZ-5456-01A
57 years, male, white, stage:Stage II, alive, 2422 days
1188.3
TCGA-CJ-4639-01A
49 years, female, white, stage:Stage II, alive, 3229 days
1184.5
TCGA-A3-3367-01A
72 years, male, white, stage:Stage I, alive, 2270 days
1184.5
TCGA-CZ-5459-01A
63 years, male, white, stage:Stage III, alive, 1683 days
1183.7
TCGA-G6-A8L8-01A
62 years, female, black or african american, stage:Stage I, dead, 1091 days
1181.0
TCGA-B0-4845-01A
70 years, male, white, stage:Stage IV, dead, 1986 days
1179.9
TCGA-BP-4784-01A
67 years, female, white, stage:Stage I, alive, 1854 days
1179.8
TCGA-A3-A8OV-01A
75 years, male, black or african american, stage:Stage I, alive, 340 days
1179.0
TCGA-CW-5581-01A
44 years, male, white, stage:Stage I, alive, 2799 days
1174.7
TCGA-B0-5812-01A
53 years, male, white, stage:Stage I, alive, 3834 days
1173.3
TCGA-CJ-5676-01A
47 years, male, white, stage:Stage III, alive, 4067 days
1169.9
TCGA-B8-5549-01A
53 years, male, white, stage:Stage I, alive, 194 days
1167.9
TCGA-BP-4760-01A
69 years, male, black or african american, stage:Stage I, alive, 2361 days
1166.9
TCGA-BP-4975-01A
40 years, male, white, stage:Stage I, alive, 1433 days
1166.9
TCGA-B0-4828-01A
79 years, male, white, stage:Stage IV, dead, 307 days
1166.8
TCGA-BP-4340-01A
70 years, female, white, stage:Stage I, dead, 562 days
1166.5
TCGA-B0-5399-01A
46 years, male, white, stage:Stage I, alive, 1411 days
1166.5
TCGA-BP-4795-01A
74 years, female, white, stage:Stage I, alive, 620 days
1162.1
TCGA-G6-A5PC-01A
54 years, female, black or african american, stage:Stage IV, dead, 242 days
1161.9
TCGA-BP-4765-01A
43 years, male, white, stage:Stage I, alive, 2184 days
1159.5
TCGA-A3-3346-01A
68 years, male, white, stage:Stage I, dead, 137 days
1159.1
TCGA-B4-5834-01A
59 years, male, white, stage:Stage I, alive, 38 days
1158.0
TCGA-CZ-4857-01A
56 years, male, white, stage:Stage IV, dead, 1432 days
1157.9
TCGA-CZ-5466-01A
67 years, male, stage:Stage III, alive, 685 days
1157.5
TCGA-AK-3445-01A
69 years, male, white, stage:Stage III, alive, 2392 days
1155.9
TCGA-B0-4848-01A
54 years, male, white, stage:Stage III, dead, 883 days
1155.6
TCGA-BP-5007-01A
45 years, male, white, stage:Stage II, alive, 1140 days
1154.4
TCGA-MM-A563-01A
41 years, male, black or african american, stage:'--, alive, 591 days
1154.0
TCGA-BP-4345-01A
62 years, male, white, stage:Stage III, alive, 1516 days
1152.2
TCGA-CJ-4640-01A
49 years, male, white, stage:Stage III, alive, 3480 days
1151.6
TCGA-DV-5568-01A
26 years, male, white, stage:Stage I, alive, 370 days
1150.8
TCGA-BP-4964-01A
54 years, female, white, stage:Stage I, alive, 1862 days
1150.1
TCGA-CJ-4907-01A
58 years, male, white, stage:Stage III, alive, 1499 days
1150.1
TCGA-A3-3358-01A
57 years, female, white, stage:Stage I, alive, 1307 days
1149.7
TCGA-BP-4801-01A
57 years, male, white, stage:Stage I, alive, 1124 days
1148.0
TCGA-CJ-4644-01A
48 years, female, white, stage:Stage IV, dead, 336 days
1148.0
TCGA-CZ-5464-01A
69 years, male, white, stage:Stage IV, alive, 2128 days
1146.6
TCGA-B0-4810-01A
47 years, male, white, stage:Stage III, dead, 478 days
1142.3
TCGA-BP-4354-01A
40 years, male, white, stage:Stage IV, dead, 1034 days
1141.5
TCGA-A3-3349-01A
34 years, female, white, stage:Stage I, alive, 1385 days
1138.6
TCGA-CJ-6030-01A
65 years, male, white, stage:Stage I, dead, 2299 days
1133.3
TCGA-B0-5693-01A
47 years, female, white, stage:Stage I, alive, 4074 days
1131.5
TCGA-B0-4693-01A
72 years, female, white, stage:Stage III, dead, 77 days
1130.7
TCGA-BP-4338-01A
43 years, male, white, stage:Stage I, alive, 2859 days
1130.2
TCGA-CJ-4897-01A
79 years, female, white, stage:Stage III, alive, 3341 days
1128.8
TCGA-A3-3387-01A
49 years, male, white, stage:Stage I, alive, 617 days
1127.6
TCGA-CJ-4872-01A
51 years, male, white, stage:Stage I, alive, 1435 days
1127.3
TCGA-BP-4343-01A
64 years, male, white, stage:Stage III, dead, 1912 days
1127.0
TCGA-B8-A7U6-01A
54 years, female, black or african american, stage:Stage I, alive, 495 days
1125.9
TCGA-BP-4332-01A
36 years, male, white, stage:Stage III, alive, 1133 days
1125.4
TCGA-B0-4849-01A
51 years, male, white, stage:Stage III, dead, 69 days
1123.9
TCGA-CW-5589-01A
52 years, male, white, stage:Stage I, alive, 2378 days
1122.1
TCGA-B0-4842-01A
73 years, female, white, stage:Stage III, dead, 1724 days
1120.3
TCGA-CZ-5984-01A
51 years, male, white, stage:Stage I, alive, 2067 days
1119.3
TCGA-CZ-5458-01A
43 years, male, white, stage:Stage III, alive, 2789 days
1118.9
TCGA-A3-A6NN-01A
78 years, male, black or african american, stage:Stage I, alive, 3 days
1116.9
TCGA-CJ-4886-01A
42 years, female, white, stage:Stage I, alive, 1952 days
1116.2
TCGA-B0-4690-01A
65 years, male, white, stage:Stage IV, dead, 43 days
1115.5
TCGA-BP-4993-01A
58 years, male, white, stage:Stage I, alive, 177 days
1115.5
TCGA-CZ-5463-01A
76 years, male, white, stage:Stage II, alive, 662 days
1111.5
TCGA-B8-5165-01A
43 years, male, white, stage:Stage I, alive, 737 days
1109.8
TCGA-BP-4344-01A
75 years, female, white, stage:Stage I, alive, 1666 days
1108.2
TCGA-CZ-4856-01A
62 years, female, white, stage:Stage I, alive, 18 days
1107.5
TCGA-BP-4981-01A
75 years, female, white, stage:Stage III, dead, 1097 days
1101.1
TCGA-CJ-4871-01A
63 years, male, white, stage:Stage IV, alive, 2423 days
1100.7
TCGA-B0-4818-01A
68 years, female, white, stage:Stage II, dead, 510 days
1100.1
TCGA-CZ-4859-01A
59 years, female, white, stage:Stage I, alive, 1787 days
1097.4
TCGA-A3-3343-01A
79 years, male, white, stage:Stage II, alive, 945 days
1096.5
TCGA-BP-4768-01A
72 years, female, white, stage:Stage I, alive, 400 days
1095.3
TCGA-B8-A54K-01A
61 years, male, black or african american, stage:Stage I, alive, 469 days
1093.7
TCGA-BP-4341-01A
67 years, male, white, stage:Stage III, dead, 1589 days
1092.0
TCGA-B0-5712-01A
68 years, female, black or african american, stage:Stage IV, alive, 2722 days
1091.9
TCGA-CZ-5457-01A
62 years, male, white, stage:Stage III, alive, 2754 days
1091.0
TCGA-BP-4804-01A
59 years, male, white, stage:Stage I, alive, 1459 days
1086.8
TCGA-DV-5569-01A
29 years, female, white, stage:Stage I, alive, 355 days
1086.0
TCGA-BP-4807-01A
42 years, male, white, stage:Stage I, alive, 211 days
1081.1
TCGA-A3-3307-01A
66 years, male, stage:Stage III, alive, 1436 days
1080.7
TCGA-CJ-4876-01A
57 years, male, white, stage:Stage II, alive, 1955 days
1080.7
TCGA-BP-5177-01A
46 years, female, white, stage:Stage I, alive, 293 days
1078.5
TCGA-BP-5199-01A
58 years, male, white, stage:Stage II, alive, 1355 days
1078.2
TCGA-CZ-5986-01A
61 years, male, white, stage:Stage I, alive, 373 days
1077.7
TCGA-B8-4622-01A
57 years, male, white, stage:Stage IV, alive, 1525 days
1075.4
TCGA-EU-5907-01A
81 years, male, white, stage:Stage III, alive, 127 days
1075.2
TCGA-CJ-4903-01A
50 years, male, white, stage:Stage I, alive, 1560 days
1073.6
TCGA-BP-4337-01A
76 years, female, white, stage:Stage III, dead, 2 days
1071.4
TCGA-A3-3363-01A
50 years, male, asian, stage:Stage II, alive, 319 days
1070.7
TCGA-BP-4330-01A
60 years, female, black or african american, stage:Stage III, alive, 1888 days
1066.3
TCGA-B0-5713-01A
75 years, female, white, stage:Stage III, alive, 2782 days
1064.8
TCGA-BP-4169-01A
76 years, female, white, stage:Stage II, dead, 701 days
1064.0
TCGA-B0-4714-01A
81 years, male, white, stage:Stage IV, dead, 99 days
1063.0
TCGA-BP-5008-01A
46 years, male, white, stage:Stage I, alive, 1071 days
1060.7
TCGA-B0-5092-01A
53 years, female, white, stage:Stage IV, dead, 459 days
1059.8
TCGA-BP-4986-01A
75 years, male, white, stage:Stage I, alive, 785 days
1059.0
TCGA-CJ-5683-01A
78 years, male, white, stage:Stage I, alive, 1889 days
1057.2
TCGA-B4-5378-01A
62 years, male, white, stage:Stage I, alive, 175 days
1057.2
TCGA-BP-5184-01A
54 years, male, white, stage:Stage I, alive, 1133 days
1055.7
TCGA-BP-4787-01A
59 years, female, white, stage:Stage IV, dead, 480 days
1054.5
TCGA-BP-4781-01A
78 years, male, white, stage:Stage I, alive, 2080 days
1052.4
TCGA-B8-A54G-01A
50 years, male, black or african american, stage:Stage I, alive, 53 days
1051.8
TCGA-BP-5195-01A
75 years, male, white, stage:Stage I, alive, 749 days
1050.8
TCGA-AK-3461-01A
72 years, male, white, stage:Stage I, alive, 2217 days
1047.2
TCGA-BP-4985-01A
72 years, male, white, stage:Stage III, dead, 952 days
1045.1
TCGA-CJ-5675-01A
70 years, male, white, stage:Stage II, alive, 3936 days
1043.4
TCGA-B0-4822-01A
78 years, male, white, stage:Stage II, dead, 1111 days
1043.1
TCGA-CJ-4874-01A
73 years, female, white, stage:Stage I, alive, 2283 days
1041.7
TCGA-CJ-4893-01A
76 years, female, white, stage:Stage I, alive, 750 days
1041.7
TCGA-BP-4158-01A
69 years, male, white, stage:Stage I, alive, 3377 days
1039.0
TCGA-CJ-4902-01A
61 years, male, white, stage:Stage III, alive, 1520 days
1037.7
TCGA-BP-4164-01A
51 years, female, white, stage:Stage III, dead, 992 days
1036.4
TCGA-B0-4701-01A
66 years, female, white, stage:Stage IV, dead, 238 days
1032.8
TCGA-DV-5575-01A
52 years, female, white, stage:Stage I, alive, 1729 days
1032.1
TCGA-CJ-4912-01A
61 years, male, white, stage:Stage II, alive, 1657 days
1031.7
TCGA-A3-3319-01A
70 years, male, white, stage:Stage I, alive, 1130 days
1029.3
TCGA-CZ-5987-01A
60 years, male, white, stage:Stage IV, dead, 445 days
1029.2
TCGA-DV-5573-01A
41 years, male, white, stage:Stage I, alive, 1130 days
1027.9
TCGA-A3-3323-01A
53 years, male, white, stage:Stage I, alive, 1106 days
1021.3
TCGA-DV-5574-01A
37 years, male, white, stage:Stage I, alive, 2016 days
1021.1
TCGA-CZ-4865-01A
70 years, female, white, stage:Stage I, dead, 166 days
1019.4
TCGA-CZ-5452-01A
69 years, male, white, stage:Stage II, alive, 1789 days
1018.3
TCGA-BP-4987-01A
41 years, female, asian, stage:Stage I, alive, 1124 days
1016.1
TCGA-BP-4965-01A
46 years, male, white, stage:Stage I, alive, 1871 days
1015.9
TCGA-BP-4335-01A
65 years, female, white, stage:Stage IV, dead, 475 days
1015.4
TCGA-B0-5080-01A
63 years, male, white, stage:Stage IV, dead, 342 days
1014.5
TCGA-A3-A8OW-01A
37 years, male, black or african american, stage:Stage III, alive, 323 days
1014.2
TCGA-B0-4844-01A
60 years, male, white, stage:Stage IV, dead, 313 days
1013.4
TCGA-BP-4976-01A
77 years, male, white, stage:Stage I, alive, 1632 days
1009.9
TCGA-A3-3362-01A
60 years, female, white, stage:Stage I, alive, 1559 days
1008.4
TCGA-B0-5692-01A
66 years, female, white, stage:Stage III, alive, 3944 days
1008.3
TCGA-B0-4703-01A
51 years, male, white, stage:Stage IV, dead, 182 days
1008.3
TCGA-BP-4759-01A
50 years, male, white, stage:Stage I, alive, 2372 days
1006.5
TCGA-CJ-4905-01A
62 years, female, white, stage:Stage I, alive, 1496 days
1006.3
TCGA-A3-3372-01A
64 years, male, white, stage:Stage III, alive, 735 days
1004.9
TCGA-B0-4852-01A
78 years, female, white, stage:Stage II, dead, 1121 days
1004.5
TCGA-BP-4961-01A
47 years, male, white, stage:Stage I, alive, 1935 days
1002.1
TCGA-B0-4838-01A
69 years, female, white, stage:Stage I, dead, 834 days
1000.0
TCGA-AS-3778-01A
35 years, male, white, stage:Stage I, alive, 43 days
995.9
TCGA-A3-3325-01A
52 years, male, white, stage:Stage I, dead, 1170 days
994.2
TCGA-B8-5164-01A
65 years, male, white, stage:Stage III, alive, 26 days
993.9
TCGA-BP-4974-01A
58 years, male, white, stage:Stage IV, dead, 211 days
993.6
TCGA-BP-4998-01A
49 years, male, asian, stage:Stage I, alive, 932 days
992.6
TCGA-B4-5843-01A
45 years, male, white, stage:Stage I, alive, 11 days
990.7
TCGA-B0-5108-01A
54 years, male, white, stage:Stage III, alive, 1782 days
989.8
TCGA-BP-5189-01A
60 years, male, white, stage:Stage I, dead, 822 days
988.8
TCGA-B2-5636-01A
79 years, male, white, stage:Stage I, alive, 919 days
987.9
TCGA-CW-6093-01A
73 years, male, white, stage:Stage I, alive, 3146 days
987.4
TCGA-B8-5163-01A
63 years, female, white, stage:Stage III, alive, 822 days
985.9
TCGA-CZ-5988-01A
38 years, male, white, stage:Stage I, alive, 693 days
985.4
TCGA-CJ-4894-01A
58 years, male, white, stage:Stage III, dead, 841 days
985.4
TCGA-BP-5006-01A
61 years, male, white, stage:Stage I, alive, 840 days
978.7
TCGA-BP-4161-01A
74 years, male, white, stage:Stage I, alive, 2746 days
978.4
TCGA-B0-5110-01A
71 years, female, white, stage:Stage I, alive, 2009 days
977.6
TCGA-CJ-4920-01A
64 years, female, white, stage:Stage I, dead, 139 days
975.9
TCGA-B0-4816-01A
49 years, male, white, stage:Stage II, dead, 1371 days
975.4
TCGA-BP-4769-01A
63 years, male, white, stage:Stage I, alive, 1876 days
973.8
TCGA-BP-5181-01A
58 years, female, white, stage:Stage I, alive, 1495 days
972.7
TCGA-CJ-5671-01A
51 years, male, white, stage:Stage I, alive, 3987 days
971.1
TCGA-BP-5009-01A
52 years, male, white, stage:Stage I, dead, 1092 days
970.6
TCGA-A3-3376-01A
51 years, male, black or african american, stage:Stage I, dead, 1696 days
969.9
TCGA-B0-5106-01A
64 years, male, white, stage:Stage I, dead, 1598 days
969.6
TCGA-CJ-4899-01A
42 years, male, asian, stage:Stage I, alive, 1528 days
968.6
TCGA-CJ-4638-01A
46 years, female, white, stage:Stage IV, dead, 431 days
968.0
TCGA-CJ-4904-01A
60 years, female, white, stage:Stage IV, alive, 3302 days
967.8
TCGA-BP-4963-01A
63 years, male, white, stage:Stage I, alive, 1834 days
967.1
TCGA-B8-5545-01A
42 years, male, black or african american, stage:Stage I, alive, 1525 days
966.9
TCGA-A3-3351-01A
42 years, male, white, stage:Stage II, alive, 910 days
964.5
TCGA-B0-4833-01A
82 years, female, white, stage:Stage I, dead, 2386 days
964.0
TCGA-B0-4837-01A
63 years, male, white, stage:Stage I, dead, 1378 days
962.4
TCGA-B8-A54J-01A
60 years, male, black or african american, stage:Stage II, alive, 528 days
962.3
TCGA-BP-4803-01A
79 years, male, white, stage:Stage III, alive, 204 days
960.0
TCGA-B0-4713-01A
76 years, female, white, stage:Stage III, dead, 202 days
959.6
TCGA-B0-5109-01A
69 years, male, white, stage:Stage III, dead, 587 days
957.6
TCGA-BP-4347-01A
74 years, male, white, stage:Stage III, alive, 1367 days
957.6
TCGA-BP-4326-01A
53 years, female, white, stage:Stage I, dead, 1625 days
956.8
TCGA-BP-5194-01A
39 years, male, white, stage:Stage I, alive, 408 days
955.8
TCGA-B0-5697-01A
50 years, male, white, stage:Stage I, alive, 2630 days
954.6
TCGA-CZ-5455-01A
63 years, male, white, stage:Stage IV, dead, 561 days
954.0
TCGA-CW-5585-01A
51 years, male, white, stage:Stage IV, alive, 2609 days
953.3
TCGA-AK-3453-01A
58 years, female, white, stage:Stage II, alive, 2531 days
952.9
TCGA-B0-5102-01A
74 years, female, white, stage:Stage I, dead, 2764 days
952.6
TCGA-BP-4970-01A
44 years, male, asian, stage:Stage III, alive, 433 days
951.6
TCGA-DV-A4VZ-01A
53 years, male, black or african american, stage:Stage I, alive, 365 days
950.0
TCGA-EU-5904-01A
47 years, female, white, stage:Stage I, alive, 551 days
949.9
TCGA-B0-5400-01A
59 years, female, white, stage:Stage III, alive, 1733 days
949.3
TCGA-CZ-4853-01A
82 years, male, white, stage:Stage I, alive, 774 days
948.0
TCGA-CZ-5460-01A
55 years, male, white, stage:Stage IV, alive, 2873 days
946.5
TCGA-B2-5635-01A
74 years, male, white, stage:Stage I, alive, 755 days
946.2
TCGA-A3-A6NJ-01A
57 years, female, black or african american, stage:Stage I, alive, 468 days
944.7
TCGA-CJ-4636-01A
51 years, male, white, stage:Stage III, alive, 1924 days
943.9
TCGA-B2-4101-01A
52 years, male, white, stage:Stage II, alive, 648 days
941.9
TCGA-B0-5710-01A
57 years, male, white, stage:Stage I, alive, 2430 days
940.2
TCGA-B0-4700-01A
60 years, male, white, stage:Stage IV, dead, 1980 days
939.6
TCGA-EU-5906-01A
55 years, male, white, stage:Stage I, alive, 206 days
937.9
TCGA-CW-5583-01A
51 years, female, white, stage:Stage I, alive, 2489 days
937.8
TCGA-B0-5711-01A
50 years, male, white, stage:Stage III, alive, 3989 days
935.0
TCGA-CZ-4866-01A
79 years, female, white, stage:Stage I, alive, 3267 days
933.1
TCGA-CZ-5451-01A
74 years, male, white, stage:Stage II, alive, 1929 days
933.0
TCGA-BP-5187-01A
54 years, male, white, stage:Stage I, alive, 406 days
932.6
TCGA-DV-5567-01A
40 years, female, black or african american, stage:Stage I, alive, 2004 days
930.7
TCGA-BP-4327-01A
75 years, female, white, stage:Stage II, dead, 109 days
929.3
TCGA-B0-5119-01A
61 years, female, white, stage:Stage I, alive, 1552 days
927.6
TCGA-CZ-4863-01A
51 years, female, white, stage:Stage III, alive, 1928 days
927.4
TCGA-BP-5182-01A
56 years, male, white, stage:Stage I, alive, 1165 days
924.4
TCGA-B0-5705-01A
65 years, female, white, stage:Stage I, alive, 4537 days
923.2
TCGA-B4-5377-01A
68 years, female, white, stage:Stage IV, alive, 365 days
923.0
TCGA-B0-4824-01A
49 years, female, white, stage:Stage I, dead, 1657 days
915.6
TCGA-CJ-4908-01A
38 years, male, white, stage:Stage I, alive, 1531 days
913.9
TCGA-CJ-5682-01A
60 years, male, white, stage:Stage IV, alive, 3736 days
912.2
TCGA-BP-5191-01A
79 years, male, white, stage:Stage III, alive, 967 days
908.6
TCGA-DV-5566-01A
67 years, female, white, stage:Stage I, alive, 1398 days
907.4
TCGA-CJ-6031-01A
54 years, male, white, stage:Stage I, alive, 1906 days
906.8
TCGA-BP-4960-01A
46 years, male, white, stage:Stage II, alive, 2172 days
906.8
TCGA-CJ-4869-01A
49 years, male, white, stage:Stage III, alive, 2554 days
906.1
TCGA-CJ-4868-01A
42 years, male, white, stage:Stage IV, dead, 646 days
904.7
TCGA-BP-4972-01A
43 years, female, white, stage:Stage III, alive, 1502 days
904.7
TCGA-CJ-5686-01A
59 years, female, white, stage:Stage I, alive, 2038 days
902.3
TCGA-BP-4173-01A
47 years, male, white, stage:Stage II, alive, 1893 days
902.2
TCGA-CW-6088-01A
60 years, male, white, stage:Stage I, alive, 3222 days
901.9
TCGA-B0-5096-01A
72 years, female, white, stage:Stage III, dead, 68 days
898.0
TCGA-BP-4349-01A
68 years, female, white, stage:Stage I, alive, 372 days
897.9
TCGA-B0-4847-01A
60 years, male, white, stage:Stage IV, dead, 793 days
897.0
TCGA-BP-5176-01A
78 years, female, white, stage:Stage I, dead, 1590 days
895.9
TCGA-CW-5580-01A
73 years, female, white, stage:Stage IV, dead, 1964 days
895.2
TCGA-B0-4945-01A
75 years, female, white, stage:Stage I, dead, 2145 days
890.3
TCGA-CJ-5677-01A
54 years, female, white, stage:Stage IV, dead, 782 days
890.0
TCGA-DV-5576-01A
55 years, female, black or african american, stage:Stage I, dead, 727 days
889.3
TCGA-CJ-5679-01A
73 years, male, white, stage:Stage III, dead, 679 days
887.8
TCGA-CJ-4875-01A
67 years, male, white, stage:Stage IV, dead, 3554 days
886.5
TCGA-BP-4331-01A
52 years, male, white, stage:Stage I, dead, 2454 days
885.1
TCGA-BP-5201-01A
63 years, male, white, stage:Stage IV, alive, 951 days
884.4
TCGA-A3-3359-01A
82 years, female, white, stage:Stage I, alive, 2504 days
883.7
TCGA-CZ-5468-01A
84 years, male, white, stage:Stage IV, dead, 59 days
882.0
TCGA-CZ-5470-01A
72 years, female, stage:Stage II, alive, 386 days
881.4
TCGA-AK-3454-01A
84 years, male, white, stage:Stage I, alive, 874 days
878.2
TCGA-CZ-4861-01A
63 years, male, white, stage:Stage II, dead, 446 days
878.0
TCGA-GK-A6C7-01A
76 years, female, black or african american, stage:Stage I, alive, 61 days
877.5
TCGA-CJ-6027-01A
77 years, male, white, stage:Stage I, dead, 3615 days
877.4
TCGA-BP-4995-01A
68 years, male, white, stage:Stage I, alive, 1371 days
877.3
TCGA-B0-5088-01A
53 years, male, white, stage:Stage I, dead, 563 days
876.9
TCGA-B8-A54H-01A
69 years, female, black or african american, stage:Stage II, alive, 256 days
876.7
TCGA-B0-5077-01A
77 years, male, white, stage:Stage I, dead, 1317 days
875.3
TCGA-BP-5000-01A
40 years, male, white, stage:Stage I, alive, 563 days
874.4
TCGA-CW-5587-01A
62 years, female, white, stage:Stage III, alive, 2226 days
872.9
TCGA-B0-5694-01A
71 years, male, white, stage:Stage III, dead, 480 days
871.3
TCGA-CJ-4634-01A
60 years, female, white, stage:Stage I, alive, 3498 days
869.0
TCGA-B0-5121-01A
56 years, male, white, stage:Stage I, alive, 1485 days
868.9
TCGA-B8-5553-01A
67 years, female, white, stage:Stage I, alive, 435 days
868.5
TCGA-A3-A8CQ-01A
59 years, female, black or african american, stage:Stage I, alive, 3 days
866.9
TCGA-CZ-5462-01A
83 years, male, white, stage:Stage IV, dead, 311 days
861.8
TCGA-CJ-4643-01A
67 years, female, white, stage:Stage II, alive, 1793 days
861.4
TCGA-BP-5202-01A
75 years, male, white, stage:Stage III, alive, 29 days
860.9
TCGA-MM-A84U-01A
58 years, female, black or african american, stage:Stage I, alive, 700 days
859.7
TCGA-A3-3370-01A
48 years, female, white, stage:Stage I, alive, 2274 days
859.5
TCGA-CZ-5985-01A
58 years, male, white, stage:Stage II, alive, 1997 days
857.9
TCGA-BP-4777-01A
46 years, male, white, stage:Stage I, alive, 1731 days
857.1
TCGA-BP-4352-01A
74 years, female, white, stage:Stage IV, dead, 344 days
856.0
TCGA-B0-5691-01A
66 years, female, white, stage:Stage I, alive, 3431 days
855.6
TCGA-B0-4819-01A
60 years, female, white, stage:Stage IV, dead, 183 days
853.8
TCGA-B0-5698-01A
77 years, male, black or african american, stage:Stage I, alive, 3631 days
853.5
TCGA-B0-4836-01A
61 years, male, white, stage:Stage IV, dead, 1238 days
853.2
TCGA-B8-5546-01A
38 years, female, black or african american, stage:Stage I, alive, 505 days
850.9
TCGA-A3-3311-01A
57 years, male, stage:Stage I, dead, 1191 days
850.5
TCGA-BP-5178-01A
71 years, male, white, stage:Stage IV, dead, 1912 days
850.2
TCGA-BP-5183-01A
57 years, male, white, stage:Stage III, alive, 1291 days
850.1
TCGA-B4-5836-01A
61 years, female, white, stage:Stage I, alive, 141 days
849.9
TCGA-B4-5838-01A
52 years, male, white, stage:'--, alive, 166 days
849.4
TCGA-B4-5844-01A
61 years, female, white, stage:Stage II, alive, 7 days
848.3
TCGA-B0-4696-01A
58 years, male, white, stage:Stage III, dead, 866 days
846.3
TCGA-B2-5641-01A
79 years, male, white, stage:Stage I, alive, 656 days
845.8
TCGA-CJ-4637-01A
52 years, female, white, stage:Stage IV, dead, 2227 days
845.4
TCGA-B8-5158-01A
56 years, male, white, stage:Stage III, alive, 1218 days
844.8
TCGA-B0-4707-01A
63 years, male, white, stage:Stage III, dead, 600 days
836.7
TCGA-CJ-4641-01A
55 years, female, white, stage:Stage IV, dead, 1661 days
836.2
TCGA-B0-4710-01A
75 years, female, white, stage:Stage III, alive, 1755 days
835.6
TCGA-BP-5185-01A
56 years, male, white, stage:Stage I, alive, 1132 days
835.0
TCGA-BP-4999-01A
56 years, male, white, stage:Stage I, alive, 1266 days
833.1
TCGA-BP-5186-01A
50 years, female, white, stage:Stage I, alive, 693 days
832.6
TCGA-CZ-4864-01A
86 years, male, white, stage:Stage II, dead, 1315 days
827.9
TCGA-BP-4342-01A
79 years, male, white, stage:Stage II, dead, 2256 days
826.2
TCGA-BP-4982-01A
42 years, male, white, stage:Stage I, alive, 1014 days
825.6
TCGA-A3-3335-01A
41 years, male, white, stage:Stage II, alive, 1886 days
824.1
TCGA-CJ-4916-01A
69 years, female, white, stage:Stage III, alive, 1373 days
822.9
TCGA-G6-A8L7-01A
81 years, female, black or african american, stage:Stage I, alive, 2133 days
822.3
TCGA-BP-4991-01A
54 years, male, white, stage:Stage I, alive, 1413 days
820.9
TCGA-BP-4962-01A
58 years, male, white, stage:Stage II, alive, 1785 days
819.2
TCGA-CJ-4884-01A
72 years, female, white, stage:Stage III, alive, 1759 days
817.3
TCGA-BP-4774-01A
57 years, female, white, stage:Stage I, alive, 1885 days
817.2
TCGA-B8-5550-01A
71 years, male, white, stage:Stage III, alive, 1476 days
815.6
TCGA-A3-3326-01A
47 years, male, white, stage:Stage I, alive, 1137 days
815.1
TCGA-B0-5690-01A
53 years, female, white, stage:Stage I, alive, 3392 days
813.1
TCGA-CJ-4635-01A
48 years, male, white, stage:Stage I, alive, 1416 days
809.5
TCGA-CJ-5672-01A
84 years, male, white, stage:Stage I, dead, 1972 days
809.5
TCGA-BP-4798-01A
74 years, male, white, stage:'--, dead, 334 days
807.5
TCGA-B0-5081-01A
79 years, female, white, stage:Stage III, dead, 362 days
807.4
TCGA-CW-6087-01A
61 years, male, white, stage:Stage IV, dead, 41 days
802.2
TCGA-A3-3347-01A
76 years, female, white, stage:Stage III, dead, 1610 days
800.4
TCGA-B0-5085-01A
76 years, female, white, stage:Stage III, dead, 770 days
797.6
TCGA-BP-4973-01A
47 years, male, white, stage:Stage III, alive, 1384 days
794.6
TCGA-CJ-4878-01A
71 years, female, white, stage:Stage III, alive, 2186 days
794.0
TCGA-BP-5001-01A
43 years, female, white, stage:Stage I, alive, 1177 days
790.9
TCGA-CJ-4918-01A
64 years, male, white, stage:Stage IV, dead, 93 days
789.4
TCGA-A3-3320-01A
52 years, female, white, stage:Stage I, alive, 1508 days
789.2
TCGA-B0-4841-01A
63 years, male, white, stage:Stage IV, dead, 204 days
786.9
TCGA-B0-5097-01A
59 years, female, white, stage:Stage III, alive, 665 days
786.7
TCGA-BP-4346-01A
57 years, male, white, stage:Stage III, dead, 1493 days
785.8
TCGA-CJ-5680-01A
65 years, female, white, stage:Stage IV, dead, 768 days
785.7
TCGA-DV-5565-01A
59 years, male, white, stage:Stage I, alive, 1329 days
784.6
TCGA-B0-4846-01A
52 years, male, white, stage:Stage IV, dead, 1200 days
782.2
TCGA-BP-5010-01A
63 years, male, white, stage:Stage III, dead, 878 days
781.2
TCGA-A3-3324-01A
51 years, male, white, stage:Stage I, alive, 1186 days
780.6
TCGA-B0-5075-01A
77 years, female, white, stage:Stage III, dead, 637 days
780.0
TCGA-CZ-4862-01A
46 years, male, white, stage:Stage I, alive, 3271 days
778.6
TCGA-BP-4771-01A
62 years, male, white, stage:Stage IV, dead, 162 days
778.5
TCGA-A3-3328-01A
79 years, male, white, stage:Stage I, alive, 1385 days
778.1
TCGA-B0-5707-01A
39 years, female, white, stage:Stage I, alive, 3744 days
775.1
TCGA-BP-5004-01A
53 years, male, white, stage:Stage I, alive, 1126 days
773.8
TCGA-B0-4699-01A
74 years, male, white, stage:Stage IV, dead, 110 days
770.6
TCGA-B0-5099-01A
88 years, female, white, stage:Stage III, dead, 485 days
770.5
TCGA-A3-3385-01A
46 years, female, white, stage:Stage I, alive, 1993 days
769.8
TCGA-BP-4983-01A
67 years, female, asian, stage:Stage III, alive, 1413 days
768.6
TCGA-A3-3331-01A
86 years, female, white, stage:Stage I, alive, 1257 days
767.5
TCGA-CZ-5453-01A
67 years, male, white, stage:Stage II, dead, 2419 days
765.7
TCGA-B8-5162-01A
62 years, male, white, stage:Stage II, alive, 36 days
765.1
TCGA-CZ-4858-01A
39 years, male, white, stage:Stage II, dead, 2105 days
763.4
TCGA-B2-4102-01A
61 years, male, white, stage:Stage I, alive, 952 days
761.1
TCGA-BP-5175-01A
60 years, male, white, stage:Stage I, alive, 932 days
759.9
TCGA-B0-4815-01A
65 years, male, white, stage:Stage III, dead, 1588 days
757.7
TCGA-B2-5639-01A
46 years, male, white, stage:Stage IV, dead, 1003 days
754.5
TCGA-BP-4994-01A
54 years, male, white, stage:Stage I, alive, 1308 days
751.8
TCGA-B2-A4SR-01A
61 years, male, black or african american, stage:Stage II, alive, 507 days
750.7
TCGA-A3-3322-01A
51 years, male, white, stage:Stage I, alive, 1478 days
750.3
TCGA-B0-5083-01A
63 years, male, white, stage:Stage I, dead, 1045 days
749.9
TCGA-A3-3316-01A
57 years, male, white, stage:Stage II, alive, 1493 days
749.4
TCGA-BP-4967-01A
76 years, male, white, stage:Stage III, alive, 205 days
746.9
TCGA-B0-5699-01A
53 years, male, white, stage:Stage I, alive, 3841 days
746.5
TCGA-CJ-4895-01A
62 years, male, white, stage:Stage IV, dead, 1200 days
741.4
TCGA-CJ-4891-01A
57 years, female, white, stage:Stage III, dead, 819 days
740.7
TCGA-B8-4148-01A
63 years, female, white, stage:Stage I, alive, 1520 days
740.2
TCGA-BP-4989-01A
58 years, male, white, stage:Stage III, alive, 118 days
739.9
TCGA-CJ-4887-01A
48 years, male, white, stage:Stage IV, dead, 932 days
735.5
TCGA-AK-3440-01A
58 years, male, white, stage:Stage I, alive, 2865 days
727.0
TCGA-CW-5584-01A
74 years, male, white, stage:Stage III, dead, 164 days
725.0
TCGA-B8-A8YJ-01A
60 years, female, black or african american, stage:Stage I, alive, 431 days
720.2
TCGA-CJ-4890-01A
72 years, male, white, stage:Stage IV, alive, 3519 days
719.0
TCGA-B0-5709-01A
62 years, female, white, stage:Stage III, alive, 3974 days
718.8
TCGA-CW-6097-01A
32 years, male, white, stage:Stage III, dead, 571 days
715.9
TCGA-B0-4817-01A
81 years, male, white, stage:Stage III, dead, 1019 days
703.4
TCGA-B0-5703-01A
73 years, male, white, stage:Stage I, alive, 2246 days
701.5
TCGA-BP-5190-01A
61 years, male, white, stage:Stage I, alive, 1011 days
695.8
TCGA-B0-4688-01A
46 years, male, white, stage:Stage IV, dead, 101 days
690.9
TCGA-CJ-4900-01A
69 years, female, white, stage:Stage IV, dead, 1714 days
690.8
TCGA-CJ-4901-01A
47 years, male, white, stage:Stage III, alive, 1450 days
689.0
TCGA-BP-4334-01A
56 years, male, white, stage:Stage III, dead, 645 days
688.4
TCGA-AK-3456-01A
48 years, male, black or african american, stage:Stage II, alive, 1143 days
687.0
TCGA-BP-4797-01A
34 years, male, white, stage:Stage III, alive, 1107 days
686.5
TCGA-B0-4698-01A
75 years, male, white, stage:Stage IV, dead, 42 days
686.0
TCGA-BP-5200-01A
44 years, male, white, stage:Stage II, alive, 1063 days
684.3
TCGA-BP-4971-01A
40 years, male, white, stage:Stage III, alive, 1487 days
680.3
TCGA-BP-5198-01A
72 years, male, white, stage:Stage III, alive, 603 days
679.6
TCGA-CJ-6032-01A
63 years, female, white, stage:Stage II, alive, 3639 days
674.6
TCGA-BP-5174-01A
45 years, female, white, stage:Stage I, alive, 2257 days
673.6
TCGA-CJ-4882-01A
57 years, male, black or african american, stage:Stage III, alive, 1883 days
671.4
TCGA-CZ-5982-01A
59 years, female, white, stage:Stage I, alive, 2439 days
665.6
TCGA-BP-4766-01A
43 years, female, white, stage:Stage I, alive, 1462 days
664.7
TCGA-BP-4325-01A
64 years, female, white, stage:Stage I, alive, 2964 days
660.8
TCGA-DV-A4W0-01A
55 years, male, black or african american, stage:Stage I, alive, 2470 days
660.4
TCGA-B0-5701-01A
65 years, male, white, stage:Stage III, alive, 2461 days
660.3
TCGA-6D-AA2E-01A
68 years, female, black or african american, stage:Stage I, alive, 362 days
658.6
TCGA-BP-4969-01A
63 years, female, white, stage:Stage I, alive, 1794 days
657.0
TCGA-BP-4775-01A
55 years, female, white, stage:Stage I, alive, 1843 days
649.9
TCGA-AK-3443-01A
45 years, male, white, stage:Stage II, alive, 1423 days
646.4
TCGA-CJ-4889-01A
63 years, female, white, stage:Stage I, alive, 1946 days
639.7
TCGA-B0-4843-01A
57 years, male, white, stage:Stage III, dead, 320 days
639.0
TCGA-B8-A54D-01A
69 years, male, black or african american, stage:Stage III, alive, 830 days
628.3
TCGA-CJ-5681-01A
44 years, female, white, stage:Stage IV, dead, 552 days
627.5
TCGA-A3-3357-01A
62 years, male, white, stage:Stage II, alive, 2688 days
624.7
TCGA-CW-5591-01A
56 years, male, white, stage:Stage IV, alive, 2271 days
624.5
TCGA-BP-4977-01A
57 years, male, white, stage:Stage I, alive, 454 days
621.1
TCGA-B4-5835-01A
64 years, female, white, stage:Stage I, alive, 16 days
613.5
TCGA-A3-3317-01A
67 years, male, stage:Stage II, alive, 1491 days
612.3
TCGA-BP-4959-01A
49 years, male, white, stage:Stage I, alive, 2660 days
612.1
TCGA-CJ-4888-01A
59 years, male, white, stage:Stage IV, dead, 1567 days
600.5
TCGA-A3-3308-01A
77 years, female, white, stage:Stage III, alive, 16 days
596.8
TCGA-CJ-6028-01A
58 years, male, white, stage:Stage IV, dead, 1625 days
591.8
TCGA-A3-3373-01A
54 years, female, white, stage:Stage I, alive, 1621 days
591.4
TCGA-A3-3374-01A
51 years, female, black or african american, stage:Stage I, alive, 1314 days
581.7
TCGA-B8-4621-01A
63 years, male, black or african american, stage:Stage I, alive, 788 days
579.7
TCGA-B0-4697-01A
46 years, female, white, stage:Stage IV, dead, 578 days
575.6
TCGA-B8-4619-01A
58 years, male, white, stage:Stage I, alive, 523 days
564.4
TCGA-AS-3777-01A
63 years, male, white, stage:Stage I, alive, 1238 days
560.7
TCGA-BP-4790-01A
76 years, male, white, stage:Stage I, dead, 1111 days
557.5
TCGA-B2-4098-01A
72 years, female, black or african american, stage:Stage I, dead, 51 days
546.4
TCGA-T7-A92I-01A
47 years, female, black or african american, stage:Stage I, alive, 356 days
538.8
TCGA-B8-5551-01A
65 years, female, black or african american, stage:Stage I, alive, 16 days
538.6
TCGA-BP-4756-01A
62 years, female, asian, stage:Stage I, alive, 374 days
535.9
TCGA-B2-3923-01A
59 years, male, white, stage:Stage II, alive, 992 days
512.5
TCGA-AK-3433-01A
48 years, female, white, stage:Stage II, alive, 3409 days
504.5
TCGA-B0-4827-01A
77 years, female, white, stage:Stage III, dead, 885 days
503.4
TCGA-AK-3465-01A
71 years, female, black or african american, stage:Stage I, alive, 369 days
503.2
TCGA-B8-A54I-01A
48 years, male, black or african american, stage:Stage I, alive, 150 days
490.4
TCGA-BP-4992-01A
66 years, male, white, stage:Stage I, alive, 501 days
490.3
TCGA-A3-3378-01A
60 years, male, white, stage:Stage I, alive, 630 days
465.6
TCGA-B0-5117-01A
40 years, male, white, stage:Stage I, alive, 1608 days
447.3
TCGA-B8-A54E-01A
62 years, female, black or african american, stage:Stage I, alive, 909 days
429.2
TCGA-BP-4799-01A
70 years, male, white, stage:Stage III, dead, 1133 days
414.8
TCGA-CZ-5989-01A
60 years, male, white, stage:Stage II, alive, 1905 days
411.5
TCGA-B0-4834-01A
49 years, male, white, stage:Stage I, dead, 2090 days
403.8
TCGA-B0-5706-01A
45 years, male, white, stage:Stage II, alive, 3205 days
400.1
TCGA-BP-5169-01A
70 years, male, white, stage:Stage I, alive, 193 days
347.1
TCGA-A3-3313-01A
59 years, male, black or african american, stage:Stage I, dead, 735 days
333.4
TCGA-B4-5832-01A
65 years, male, white, stage:Stage III, alive, 155 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PFDN5 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average pTPM
866.3
Number of samples
100
Samples
Sample
Description
pTPM
ccRCC-50
68 years, male, NA, stage:pT3bN0M0, alive, 900 days
2383.0
ccRCC-55
58 years, female, NA, stage:pT3bN0M0, alive, 1260 days
1671.7
ccRCC-46
61 years, male, NA, stage:pT1bN0M0, alive, 990 days
1365.5
ccRCC-14
58 years, male, NA, stage:pT3cN0M0, alive, 2280 days
1290.5
ccRCC-97
40 years, male, NA, stage:pT1aN2M1, dead, 990 days
1268.8
ccRCC-51
70 years, male, NA, stage:pT3aN0M0, alive, 1410 days
1248.4
ccRCC-1
58 years, female, NA, stage:pT1bN0M0, alive, 3330 days
1245.3
ccRCC-102
53 years, male, NA, stage:pT1bN0M0, alive, 4260 days
1179.8
ccRCC-16
48 years, male, NA, stage:pT2N0M0, alive, 2190 days
1177.6
ccRCC-106
58 years, male, NA, stage:pT1aN0M0, dead, 1890 days
1159.9
ccRCC-8
73 years, male, NA, stage:pT1bN0M0, alive, 2400 days
1143.9
ccRCC-32
55 years, male, NA, stage:pT2N0M0, dead, 1320 days
1141.7
ccRCC-3
71 years, male, NA, stage:pT3bN1M0, dead, 240 days
1139.3
ccRCC-21
70 years, male, NA, stage:pT1bN0M0, alive, 1080 days
1112.5
ccRCC-6
75 years, male, NA, stage:pT1bN0M0, alive, 2820 days
1103.4
ccRCC-99
60 years, female, NA, stage:pT2N0M0, alive, 3330 days
1093.8
ccRCC-11
76 years, male, NA, stage:pT1aN0M0, alive, 2370 days
1072.3
ccRCC-19
39 years, female, NA, stage:pT2N0M0, alive, 2100 days
1034.4
ccRCC-69
80 years, male, NA, stage:pT1aN0M0, alive, 2670 days
1034.3
ccRCC-90
72 years, male, NA, stage:pT1aN0M0, dead, 1170 days
1029.6
ccRCC-18
56 years, female, NA, stage:pT1aN0M0, alive, 2130 days
1029.0
ccRCC-56
78 years, male, NA, stage:pT1aN0M0, alive, 1950 days
1028.3
ccRCC-104
52 years, female, NA, stage:pT1aN0M0, alive, 3480 days
1018.6
ccRCC-45
61 years, male, NA, stage:pT1aN0M0, alive, 1020 days
1001.9
ccRCC-30
64 years, male, NA, stage:pT2N0M0, dead, 420 days
996.4
ccRCC-86
74 years, female, NA, stage:pT1bN0M0, alive, 3390 days
995.8
ccRCC-84
69 years, male, NA, stage:pT1bN0M0, alive, 2010 days
995.1
ccRCC-103
55 years, female, NA, stage:pT1aN0M0, alive, 4350 days
974.1
ccRCC-62
78 years, male, NA, stage:pT1bN0M0, alive, 1620 days
971.2
ccRCC-58
62 years, male, NA, stage:pT1aN0M0, alive, 1110 days
966.0
ccRCC-96
52 years, male, NA, stage:pT1aN0M0, alive, 3930 days
940.1
ccRCC-81
73 years, male, NA, stage:pT3aN2M0, dead, 1290 days
932.3
ccRCC-24
91 years, male, NA, stage:pT3bN0M0, dead, 750 days
906.3
ccRCC-94
69 years, male, NA, stage:pT1bN0M0, dead, 480 days
905.4
ccRCC-52
66 years, female, NA, stage:pT3bN0M1, alive, 1350 days
894.5
ccRCC-61
56 years, male, NA, stage:pT1aN0M0, alive, 1470 days
894.0
ccRCC-85
73 years, female, NA, stage:pT1bN0M0, alive, 3330 days
886.8
ccRCC-44
56 years, female, NA, stage:pT1bN0M0, alive, 1050 days
884.8
ccRCC-4
82 years, male, NA, stage:pT1bN0M0, dead, 270 days
860.7
ccRCC-66
73 years, female, NA, stage:pT3bN0M1, alive, 2520 days
857.3
ccRCC-88
64 years, male, NA, stage:pT1aN0M0, alive, 2880 days
854.4
ccRCC-93
60 years, male, NA, stage:pT1bN0M0, alive, 3660 days
854.3
ccRCC-89
59 years, male, NA, stage:pT1aN0M0, alive, 3510 days
849.7
ccRCC-71
72 years, male, NA, stage:pT1bN0M0, alive, 2160 days
845.0
ccRCC-91
67 years, male, NA, stage:pT1aN0M0, dead, 1890 days
842.9
ccRCC-20
56 years, female, NA, stage:pT3aN0M1, alive, 930 days
839.6
ccRCC-100
65 years, male, NA, stage:pT1aN0M0, alive, 4260 days
833.4
ccRCC-29
73 years, female, NA, stage:pT1aN0M0, alive, 1710 days
822.2
ccRCC-95
59 years, male, NA, stage:pT1bN0M0, alive, 3960 days
821.3
ccRCC-54
57 years, male, NA, stage:pT1bN0M0, alive, 1200 days
819.0
ccRCC-7
87 years, female, NA, stage:pT2N0M0, alive, 330 days
818.5
ccRCC-27
56 years, male, NA, stage:pT1aN0M0, alive, 1590 days
818.5
ccRCC-60
78 years, female, NA, stage:pT1aN0M0, alive, 1470 days
818.2
ccRCC-22
64 years, male, NA, stage:pT3bN0M0, dead, 330 days
817.4
ccRCC-87
40 years, male, NA, stage:pT1bN0M0, alive, 2370 days
815.0
ccRCC-38
60 years, male, NA, stage:pT1aN0M0, alive, 1380 days
811.2
ccRCC-9
75 years, male, NA, stage:pT2N1M1, dead, 360 days
804.0
ccRCC-72
35 years, male, NA, stage:pT1bN0M0, alive, 2760 days
801.9
ccRCC-70
70 years, male, NA, stage:pT4N0M1, dead, 540 days
796.3
ccRCC-65
63 years, male, NA, stage:pT3bN0M1, dead, 300 days
794.7
ccRCC-31
75 years, male, NA, stage:pT1aN0M0, alive, 1560 days
793.9
ccRCC-34
65 years, male, NA, stage:pT3bN0M1, alive, 1530 days
790.5
ccRCC-48
42 years, male, NA, stage:pT1bN0M0, alive, 990 days
775.6
ccRCC-83
72 years, male, NA, stage:pT1aN0M0, alive, 300 days
772.8
ccRCC-77
41 years, male, NA, stage:pT1bN0M0, alive, 1860 days
770.9
ccRCC-105
59 years, male, NA, stage:pT1aN0M0, alive, 2190 days
769.4
ccRCC-68
69 years, male, NA, stage:pT1bN0M0, alive, 2640 days
758.3
ccRCC-25
65 years, male, NA, stage:pT1aN0M0, alive, 1350 days
749.3
ccRCC-79
35 years, male, NA, stage:pT1bN0M0, alive, 2670 days
748.9
ccRCC-59
56 years, male, NA, stage:pT1bN0M0, alive, 930 days
743.2
ccRCC-92
59 years, male, NA, stage:pT1aN0M0, alive, 3660 days
741.6
ccRCC-10
76 years, male, NA, stage:pT3aN2M1, dead, 90 days
736.7
ccRCC-64
58 years, male, NA, stage:pT3aN0M0, alive, 2430 days
735.6
ccRCC-42
73 years, male, NA, stage:pT3aN0M0, alive, 1170 days
723.2
ccRCC-53
69 years, male, NA, stage:pT1aN0M0, alive, 1260 days
703.1
ccRCC-5
77 years, male, NA, stage:pT1aN0M0, alive, 2940 days
701.6
ccRCC-82
53 years, male, NA, stage:pT1aN0M0, alive, 3090 days
699.4
ccRCC-40
65 years, male, NA, stage:pT1aN0M0, alive, 1020 days
697.3
ccRCC-15
65 years, female, NA, stage:pT2N0M0, dead, 2070 days
697.3
ccRCC-73
56 years, male, NA, stage:pT1aN0M0, alive, 2640 days
675.3
ccRCC-75
58 years, male, NA, stage:pT3aN1M1, dead, 180 days
667.0
ccRCC-35
67 years, male, NA, stage:pT1aN0M0, alive, 1380 days
661.4
ccRCC-17
54 years, female, NA, stage:pT1bN0M0, alive, 2220 days
657.6
ccRCC-78
70 years, female, NA, stage:pT1aN0M0, alive, 2610 days
653.8
ccRCC-67
59 years, male, NA, stage:pT1aN0M0, dead, 1260 days
640.4
ccRCC-80
70 years, male, NA, stage:pT2N0M0, alive, 3000 days
620.9
ccRCC-13
44 years, female, NA, stage:pT3aN2M0, dead, 540 days
616.3
ccRCC-28
59 years, male, NA, stage:pT1bN0M0, alive, 1530 days
611.8
ccRCC-39
73 years, male, NA, stage:pT2N0M0, alive, 900 days
608.0
ccRCC-12
80 years, male, NA, stage:pT1aN0M0, alive, 900 days
605.1
ccRCC-76
81 years, female, NA, stage:pT3aN0M1, dead, 960 days
604.2
ccRCC-43
55 years, female, NA, stage:pT1bN0M0, alive, 1050 days
602.3
ccRCC-26
51 years, male, NA, stage:pT1bN0M0, alive, 1800 days
593.5
ccRCC-23
72 years, male, NA, stage:pT1bN0M0, alive, 1170 days
587.1
ccRCC-49
64 years, male, NA, stage:pT3bN0M0, alive, 1290 days
563.2
ccRCC-41
82 years, male, NA, stage:pT3bN0M0, dead, 540 days
559.8
ccRCC-98
54 years, male, NA, stage:pT1aN0M0, alive, 30 days
551.1
ccRCC-36
59 years, male, NA, stage:pT2N0M0, alive, 1410 days
489.8
ccRCC-2
71 years, male, NA, stage:pT1aN0M1, dead, 2190 days
333.0
ccRCC-37
73 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PFDN5 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average pTPM
790.5
Number of samples
282
Samples
Sample
Description
pTPM
TCGA-2Z-A9JQ-01A
66 years, male, white, stage:Stage I, alive, 778 days
2298.8
TCGA-IA-A40U-01A
56 years, male, white, stage:Stage III, alive, 511 days
1914.5
TCGA-MH-A854-01A
62 years, female, black or african american, stage:Stage I, alive, 536 days
1903.8
TCGA-B9-4114-01A
49 years, male, black or african american, stage:'--, alive, 857 days
1809.4
TCGA-2Z-A9JT-01A
71 years, male, white, stage:Stage I, alive, 684 days
1806.7
TCGA-Q2-A5QZ-01A
61 years, female, black or african american, stage:Stage III, alive, 428 days
1734.8
TCGA-B9-4115-01A
53 years, male, black or african american, stage:Stage I, alive, 803 days
1658.4
TCGA-MH-A562-01A
57 years, male, black or african american, stage:Stage I, alive, 616 days
1629.9
TCGA-PJ-A5Z9-01A
80 years, female, white, stage:Stage I, alive, 540 days
1573.3
TCGA-B1-A656-01A
64 years, male, white, stage:Stage I, alive, 618 days
1534.3
TCGA-AL-3473-01A
55 years, male, white, stage:Stage II, alive, 1906 days
1517.4
TCGA-BQ-5877-01A
60 years, male, black or african american, stage:Stage IV, dead, 270 days
1492.4
TCGA-B1-A654-01A
43 years, female, black or african american, stage:Stage I, alive, 616 days
1480.4
TCGA-G7-6789-01A
53 years, female, white, stage:Stage IV, dead, 122 days
1464.0
TCGA-2Z-A9J5-01A
80 years, male, white, stage:Stage II, alive, 3050 days
1462.9
TCGA-2Z-A9JG-01A
64 years, male, white, stage:Stage I, alive, 1662 days
1451.4
TCGA-5P-A9K9-01A
59 years, female, white, stage:'--, dead, 589 days
1332.1
TCGA-UZ-A9PL-01A
59 years, male, white, stage:Stage II, alive, 3152 days
1322.6
TCGA-A4-A6HP-01A
66 years, male, white, stage:Stage I, alive, 379 days
1321.9
TCGA-AL-7173-01A
72 years, female, white, stage:Stage IV, alive, 2060 days
1312.6
TCGA-F9-A7VF-01A
75 years, female, white, stage:Stage I, alive, 73 days
1304.5
TCGA-2Z-A9JM-01A
28 years, male, white, stage:Stage I, alive, 934 days
1288.1
TCGA-AL-3467-01A
54 years, female, white, stage:'--, alive, 2135 days
1244.4
TCGA-B3-3926-01A
59 years, female, white, stage:Stage I, alive, 883 days
1223.1
TCGA-4A-A93X-01A
58 years, male, white, stage:Stage IV, alive, 390 days
1213.4
TCGA-G7-A8LB-01A
70 years, male, white, stage:Stage IV, alive, 547 days
1212.8
TCGA-IA-A40Y-01A
60 years, female, white, stage:Stage III, alive, 62 days
1184.9
TCGA-UN-AAZ9-01A
76 years, female, black or african american, stage:Stage I, alive, 548 days
1179.3
TCGA-KV-A74V-01A
40 years, male, white, stage:Stage I, alive, 347 days
1175.0
TCGA-IA-A83T-01A
80 years, male, white, stage:'--, dead, 2684 days
1174.6
TCGA-IZ-A6M9-01A
63 years, male, white, stage:Stage I, alive, 376 days
1172.2
TCGA-AL-A5DJ-01A
54 years, female, white, stage:Stage III, dead, 1498 days
1167.9
TCGA-2Z-A9J6-01A
60 years, male, white, stage:Stage I, alive, 1731 days
1161.1
TCGA-SX-A71W-01A
66 years, male, white, stage:Stage I, alive, 1076 days
1132.0
TCGA-A4-7997-01A
67 years, male, white, stage:Stage I, alive, 927 days
1128.4
TCGA-GL-A59T-01A
46 years, male, white, stage:Stage I, alive, 546 days
1122.6
TCGA-AL-3472-01A
57 years, male, black or african american, stage:'--, alive, 2029 days
1110.2
TCGA-5P-A9JV-01A
49 years, male, white, stage:'--, alive, 2043 days
1106.4
TCGA-2Z-A9JL-01A
47 years, male, black or african american, stage:Stage I, alive, 1006 days
1103.3
TCGA-IZ-A6M8-01A
69 years, male, black or african american, stage:Stage I, alive, 497 days
1103.2
TCGA-DW-7839-01A
58 years, female, white, stage:Stage I, alive, 419 days
1101.3
TCGA-2Z-A9J1-01A
71 years, male, white, stage:Stage I, alive, 2298 days
1100.9
TCGA-2Z-A9JE-01A
59 years, male, white, stage:Stage I, alive, 1728 days
1087.9
TCGA-B1-A47N-01A
62 years, male, white, stage:Stage I, alive, 1110 days
1083.8
TCGA-P4-A5E6-01A
67 years, male, black or african american, stage:Stage III, alive, 3035 days
1080.4
TCGA-KV-A6GD-01A
85 years, male, white, stage:Stage I, alive, 560 days
1080.4
TCGA-IA-A83W-01A
70 years, male, white, stage:Stage I, dead, 2043 days
1078.6
TCGA-A4-A5DU-01A
45 years, female, white, stage:Stage I, alive, 496 days
1076.0
TCGA-PJ-A5Z8-01A
60 years, female, white, stage:Stage I, alive, 600 days
1074.3
TCGA-A4-8516-01A
62 years, male, white, stage:Stage III, alive, 23 days
1070.0
TCGA-MH-A55Z-01A
65 years, male, black or african american, stage:Stage I, alive, 845 days
1066.5
TCGA-B9-A5W7-01A
47 years, male, black or african american, stage:Stage I, alive, 585 days
1064.9
TCGA-GL-A9DC-01A
66 years, female, white, stage:Stage I, alive, 392 days
1064.1
TCGA-B9-A5W9-01A
40 years, male, white, stage:Stage I, alive, 5 days
1058.8
TCGA-DW-7841-01A
61 years, male, black or african american, stage:Stage I, alive, 445 days
1047.3
TCGA-A4-7732-01A
55 years, male, black or african american, stage:'--, alive, 582 days
1047.1
TCGA-G7-A8LC-01A
61 years, male, white, stage:Stage I, alive, 702 days
1045.7
TCGA-P4-AAVL-01A
85 years, male, white, stage:Stage III, dead, 487 days
1042.8
TCGA-4A-A93W-01A
66 years, female, white, stage:Stage I, alive, 4 days
1041.6
TCGA-2Z-A9J9-01A
77 years, male, black or african american, stage:Stage I, alive, 2294 days
1040.4
TCGA-Y8-A898-01A
69 years, male, white, stage:Stage I, alive, 475 days
1025.0
TCGA-DW-5561-01A
51 years, male, black or african american, stage:Stage I, alive, 414 days
1015.7
TCGA-IA-A83V-01A
63 years, male, white, stage:Stage I, dead, 2941 days
1012.9
TCGA-BQ-5888-01A
74 years, female, white, stage:Stage I, alive, 403 days
1005.3
TCGA-B9-4116-01A
75 years, female, black or african american, stage:'--, alive, 627 days
1003.3
TCGA-2Z-A9J2-01A
71 years, female, white, stage:Stage I, alive, 1795 days
1001.8
TCGA-SX-A71U-01A
57 years, male, white, stage:Stage I, alive, 1357 days
992.6
TCGA-BQ-5887-01A
54 years, male, white, stage:Stage III, alive, 771 days
990.8
TCGA-F9-A7Q0-01A
37 years, female, asian, stage:Stage I, alive, 398 days
986.3
TCGA-DZ-6132-01A
69 years, male, stage:Stage I, alive, 2460 days
983.5
TCGA-5P-A9KA-01A
61 years, male, white, stage:'--, alive, 395 days
979.5
TCGA-B9-4113-01A
64 years, male, black or african american, stage:Stage I, dead, 1536 days
978.0
TCGA-IA-A83S-01A
81 years, male, white, stage:'--, dead, 2609 days
973.4
TCGA-B3-3925-01A
52 years, male, white, stage:Stage III, alive, 1029 days
970.9
TCGA-5P-A9JW-01A
64 years, male, white, stage:'--, alive, 3241 days
970.6
TCGA-WN-A9G9-01A
55 years, male, white, stage:Stage I, alive, 791 days
966.1
TCGA-UZ-A9PX-01A
73 years, male, white, stage:Stage I, alive, 1981 days
966.0
TCGA-B9-4617-01A
41 years, male, black or african american, stage:'--, alive, 35 days
956.6
TCGA-P4-A5ED-01A
51 years, male, white, stage:Stage I, alive, 2816 days
953.7
TCGA-MH-A856-01A
54 years, male, white, stage:Stage I, alive, 947 days
950.0
TCGA-2Z-A9J7-01A
63 years, male, white, stage:Stage IV, dead, 139 days
947.3
TCGA-BQ-7048-01A
64 years, male, white, stage:Stage III, alive, 2839 days
946.8
TCGA-2Z-A9JR-01A
57 years, male, white, stage:Stage I, alive, 161 days
940.9
TCGA-SX-A7SM-01A
60 years, male, black or african american, stage:Stage IV, dead, 363 days
939.8
TCGA-DW-7837-01A
43 years, male, black or african american, stage:Stage I, alive, 1142 days
936.2
TCGA-B9-A8YH-01A
52 years, male, black or african american, stage:Stage I, alive, 532 days
930.5
TCGA-F9-A8NY-01A
38 years, female, asian, stage:Stage IV, alive, 36 days
926.7
TCGA-SX-A7SQ-01A
48 years, male, white, stage:Stage I, alive, 1266 days
915.0
TCGA-BQ-5889-01A
63 years, male, white, stage:Stage IV, dead, 329 days
911.1
TCGA-A4-7828-01A
74 years, female, black or african american, stage:Stage I, alive, 238 days
900.6
TCGA-GL-A59R-01A
79 years, male, white, stage:Stage III, alive, 378 days
897.1
TCGA-MH-A561-01A
66 years, male, white, stage:Stage I, alive, 841 days
894.6
TCGA-P4-A5EB-01A
83 years, male, white, stage:Stage I, alive, 2477 days
890.3
TCGA-5P-A9K3-01A
59 years, male, white, stage:'--, dead, 471 days
889.6
TCGA-5P-A9K0-01A
75 years, male, white, stage:'--, alive, 677 days
884.4
TCGA-P4-AAVO-01A
69 years, male, white, stage:Stage I, alive, 2400 days
883.3
TCGA-2K-A9WE-01A
53 years, male, white, stage:Stage II, alive, 214 days
883.3
TCGA-P4-A5EA-01A
54 years, female, white, stage:Stage III, dead, 201 days
882.6
TCGA-B1-7332-01A
60 years, female, black or african american, stage:Stage II, alive, 1141 days
873.4
TCGA-UZ-A9PQ-01A
59 years, male, black or african american, stage:Stage III, dead, 2624 days
870.5
TCGA-SX-A7SR-01A
66 years, male, white, stage:Stage II, alive, 805 days
863.7
TCGA-Y8-A8RY-01A
63 years, male, white, stage:Stage I, alive, 769 days
858.1
TCGA-GL-7773-01A
63 years, male, white, stage:Stage I, alive, 393 days
851.0
TCGA-2Z-A9J8-01A
50 years, male, white, stage:Stage I, alive, 2790 days
850.4
TCGA-DW-7836-01A
55 years, male, white, stage:Stage I, alive, 1093 days
849.7
TCGA-GL-7966-01A
28 years, female, white, stage:Stage III, alive, 112 days
849.1
TCGA-AL-3468-01A
74 years, male, white, stage:Stage II, dead, 2331 days
848.6
TCGA-2Z-A9JP-01A
63 years, male, white, stage:Stage I, alive, 893 days
845.9
TCGA-G7-6796-01A
58 years, male, white, stage:Stage I, alive, 2173 days
833.9
TCGA-BQ-5885-01A
63 years, male, white, stage:Stage III, alive, 921 days
832.6
TCGA-UZ-A9PN-01A
54 years, male, white, stage:Stage III, dead, 1136 days
824.7
TCGA-HE-A5NJ-01A
58 years, male, stage:'--, alive, 1726 days
821.9
TCGA-BQ-5882-01A
54 years, male, stage:Stage III, dead, 658 days
820.5
TCGA-Y8-A8S0-01A
58 years, male, white, stage:Stage I, alive, 183 days
820.1
TCGA-UZ-A9PR-01A
84 years, male, white, stage:Stage I, alive, 2191 days
817.8
TCGA-HE-A5NK-01A
82 years, male, stage:'--, alive, 2228 days
817.3
TCGA-5P-A9JY-01A
79 years, male, white, stage:'--, dead, 1508 days
808.0
TCGA-A4-7287-01A
75 years, female, white, stage:Stage I, dead, 597 days
806.1
TCGA-B1-A47M-01A
79 years, male, black or african american, stage:Stage III, alive, 659 days
805.6
TCGA-Y8-A897-01A
68 years, female, white, stage:Stage I, alive, 549 days
805.1
TCGA-SX-A7SN-01A
52 years, male, white, stage:Stage I, alive, 578 days
799.7
TCGA-KV-A6GE-01A
65 years, male, white, stage:Stage I, alive, 885 days
795.9
TCGA-5P-A9K4-01A
54 years, male, white, stage:'--, alive, 2184 days
790.3
TCGA-A4-A5XZ-01A
65 years, female, white, stage:Stage II, alive, 479 days
784.5
TCGA-DW-7840-01A
60 years, male, black or african american, stage:Stage I, alive, 114 days
784.1
TCGA-BQ-7062-01A
64 years, male, black or african american, stage:Stage I, alive, 116 days
783.7
TCGA-5P-A9KF-01A
53 years, male, white, stage:'--, alive, 845 days
779.2
TCGA-SX-A71S-01A
66 years, female, white, stage:Stage I, alive, 1504 days
777.4
TCGA-BQ-7059-01A
71 years, male, white, stage:Stage I, alive, 232 days
777.1
TCGA-BQ-5892-01A
51 years, male, white, stage:Stage I, alive, 364 days
768.9
TCGA-B9-5156-01A
51 years, male, white, stage:'--, alive, 1338 days
763.9
TCGA-SX-A7SU-01A
47 years, male, stage:Stage I, alive, 1331 days
761.0
TCGA-DW-7842-01A
52 years, male, white, stage:Stage I, alive, 92 days
749.2
TCGA-UZ-A9PJ-01A
78 years, male, white, stage:Stage I, dead, 797 days
749.1
TCGA-B1-A657-01A
54 years, male, white, stage:Stage I, alive, 641 days
746.1
TCGA-HE-A5NH-01A
62 years, male, stage:Stage I, alive, 791 days
739.4
TCGA-MH-A560-01A
62 years, male, white, stage:Stage I, alive, 924 days
735.1
TCGA-A4-7583-01A
60 years, male, black or african american, stage:Stage I, alive, 3 days
734.3
TCGA-2Z-A9JJ-01A
69 years, female, white, stage:Stage I, alive, 1213 days
733.7
TCGA-DW-7838-01A
66 years, male, white, stage:Stage I, alive, 744 days
727.9
TCGA-BQ-5891-01A
57 years, female, white, stage:Stage III, alive, 29 days
726.2
TCGA-Y8-A894-01A
57 years, female, white, stage:Stage I, alive, 567 days
725.1
TCGA-AL-3466-01A
41 years, male, white, stage:Stage IV, dead, 293 days
720.5
TCGA-BQ-7061-01A
83 years, female, white, stage:Stage I, alive, 218 days
719.8
TCGA-MH-A55W-01A
50 years, male, black or african american, stage:Stage I, alive, 1043 days
718.7
TCGA-UZ-A9PK-01A
71 years, male, white, stage:Stage I, alive, 3571 days
713.0
TCGA-DZ-6131-01A
31 years, male, white, stage:Stage III, alive, 2429 days
710.3
TCGA-BQ-7050-01A
53 years, female, white, stage:Stage I, alive, 1864 days
706.2
TCGA-G7-A4TM-01A
40 years, male, black or african american, stage:Stage I, alive, 768 days
693.5
TCGA-V9-A7HT-01A
67 years, male, black or african american, stage:Stage II, alive, 965 days
692.7
TCGA-G7-7501-01A
55 years, female, black or african american, stage:Stage III, dead, 624 days
691.9
TCGA-B1-A47O-01A
54 years, female, white, stage:Stage I, alive, 842 days
689.7
TCGA-UZ-A9PZ-01A
65 years, male, white, stage:Stage III, alive, 657 days
683.8
TCGA-G7-A8LE-01A
62 years, male, white, stage:Stage I, alive, 2453 days
681.9
TCGA-P4-A5E8-01A
57 years, male, white, stage:Stage III, dead, 1306 days
680.1
TCGA-B3-A6W5-01A
43 years, male, black or african american, stage:Stage I, alive, 309 days
675.3
TCGA-Y8-A896-01A
62 years, male, white, stage:Stage III, alive, 567 days
674.0
TCGA-EV-5903-01A
57 years, male, white, stage:Stage I, alive, 757 days
672.5
TCGA-BQ-5893-01A
61 years, male, white, stage:Stage IV, dead, 241 days
669.2
TCGA-UZ-A9PU-01A
77 years, male, white, stage:Stage I, dead, 933 days
667.6
TCGA-4A-A93Y-01A
63 years, female, black or african american, stage:Stage II, alive, 352 days
667.0
TCGA-GL-6846-01A
52 years, male, white, stage:Stage IV, alive, 5925 days
666.4
TCGA-UZ-A9PP-01A
60 years, male, white, stage:Stage I, alive, 3010 days
665.0
TCGA-UZ-A9PO-01A
80 years, male, white, stage:Stage I, alive, 1911 days
663.7
TCGA-BQ-5890-01A
69 years, male, white, stage:Stage III, alive, 233 days
661.3
TCGA-SX-A71R-01A
51 years, male, white, stage:Stage I, alive, 1457 days
660.5
TCGA-A4-A5Y1-01A
75 years, male, white, stage:Stage III, dead, 395 days
660.4
TCGA-A4-7915-01A
35 years, female, black or african american, stage:Stage II, alive, 7 days
658.4
TCGA-B9-A69E-01A
71 years, male, white, stage:Stage III, alive, 452 days
657.5
TCGA-G7-6792-01A
40 years, male, black or african american, stage:Stage I, alive, 2765 days
657.4
TCGA-5P-A9JZ-01A
51 years, female, white, stage:'--, alive, 2744 days
653.2
TCGA-A4-A4ZT-01A
71 years, female, white, stage:Stage I, alive, 516 days
650.8
TCGA-A4-8310-01A
58 years, male, white, stage:Stage III, alive, 780 days
650.3
TCGA-GL-A9DD-01A
69 years, male, white, stage:Stage I, alive, 341 days
645.7
TCGA-P4-A5E7-01A
74 years, female, white, stage:Stage I, alive, 2649 days
629.6
TCGA-J7-6720-01A
42 years, male, asian, stage:Stage I, alive, 388 days
629.6
TCGA-BQ-5894-01A
42 years, male, stage:Stage IV, alive, 84 days
623.1
TCGA-A4-8517-01A
71 years, male, white, stage:Stage I, alive, 597 days
622.6
TCGA-GL-A9DE-01A
74 years, male, black or african american, stage:Stage I, alive, 496 days
622.0
TCGA-Y8-A895-01A
74 years, male, white, stage:Stage I, alive, 484 days
618.9
TCGA-SX-A7SO-01A
64 years, male, white, stage:Stage I, alive, 1257 days
617.3
TCGA-IA-A40X-01A
49 years, female, black or african american, stage:Stage I, alive, 608 days
614.5
TCGA-B3-8121-01A
48 years, female, black or african american, stage:Stage I, alive, 379 days
613.7
TCGA-J7-A8I2-01A
75 years, male, asian, stage:Stage I, alive, 307 days
608.4
TCGA-2Z-A9JD-01A
66 years, male, white, stage:Stage I, alive, 1060 days
607.5
TCGA-B9-5155-01A
71 years, male, white, stage:Stage III, alive, 665 days
605.9
TCGA-BQ-5878-01A
79 years, female, white, stage:Stage III, alive, 1938 days
603.9
TCGA-G7-A8LD-01A
71 years, male, white, stage:Stage III, dead, 514 days
602.0
TCGA-G7-6793-01A
60 years, female, white, stage:Stage IV, dead, 336 days
599.4
TCGA-UZ-A9PS-01A
62 years, female, black or african american, stage:Stage II, alive, 2167 days
592.4
TCGA-DW-7834-01A
53 years, male, white, stage:Stage I, alive, 3950 days
590.3
TCGA-HE-A5NI-01A
73 years, male, stage:Stage I, alive, 360 days
587.9
TCGA-BQ-7044-01A
73 years, male, white, stage:Stage III, alive, 3760 days
586.0
TCGA-A4-7734-01A
53 years, female, white, stage:Stage I, alive, 27 days
583.3
TCGA-O9-A75Z-01A
44 years, male, white, stage:Stage I, alive, 471 days
583.1
TCGA-F9-A97G-01A
79 years, male, asian, stage:Stage III, alive, 13 days
582.6
TCGA-G7-6797-01A
46 years, male, white, stage:Stage III, alive, 765 days
578.1
TCGA-5P-A9KH-01A
77 years, male, white, stage:'--, alive, 2051 days
577.2
TCGA-IZ-8196-01A
50 years, male, white, stage:Stage I, alive, 649 days
574.5
TCGA-HE-A5NL-01A
51 years, male, stage:Stage I, alive, 767 days
573.9
TCGA-5P-A9KC-01A
51 years, female, white, stage:'--, alive, 377 days
573.5
TCGA-A4-A57E-01A
59 years, male, white, stage:Stage IV, dead, 258 days
572.3
TCGA-EV-5901-01A
47 years, female, white, stage:Stage I, alive, 1040 days
572.1
TCGA-A4-8312-01A
60 years, male, black or african american, stage:Stage I, alive, 708 days
569.5
TCGA-BQ-5879-01A
32 years, female, white, stage:Stage III, dead, 697 days
568.1
TCGA-WN-AB4C-01A
60 years, female, white, stage:Stage I, alive, 1188 days
565.9
TCGA-AT-A5NU-01A
77 years, male, white, stage:Stage I, alive, 67 days
561.6
TCGA-2Z-A9JI-01A
38 years, male, white, stage:Stage III, alive, 1567 days
559.9
TCGA-2Z-A9JO-01A
56 years, female, black or african american, stage:Stage I, alive, 949 days
556.9
TCGA-BQ-7056-01A
75 years, female, white, stage:Stage III, alive, 612 days
554.6
TCGA-SX-A7SP-01A
66 years, female, white, stage:Stage I, dead, 496 days
549.8
TCGA-SX-A71V-01A
80 years, male, white, stage:Stage I, alive, 876 days
549.6
TCGA-BQ-5880-01A
79 years, male, white, stage:Stage III, dead, 1314 days
549.1
TCGA-B1-5398-01A
73 years, male, white, stage:Stage III, alive, 1251 days
540.8
TCGA-BQ-7051-01A
74 years, male, white, stage:Stage II, alive, 1533 days
537.6
TCGA-2Z-A9J3-01A
67 years, male, white, stage:Stage II, dead, 1771 days
533.7
TCGA-HE-A5NF-01A
58 years, male, stage:Stage I, alive, 2582 days
532.6
TCGA-DZ-6133-01A
66 years, female, white, stage:Stage I, dead, 1557 days
530.9
TCGA-F9-A4JJ-01A
35 years, female, black or african american, stage:Stage III, dead, 325 days
529.8
TCGA-2Z-A9JS-01A
74 years, male, white, stage:Stage I, dead, 492 days
526.9
TCGA-B3-4104-01A
75 years, male, white, stage:Stage II, alive, 1049 days
524.8
TCGA-BQ-7046-01A
61 years, male, white, stage:Stage I, alive, 2948 days
524.4
TCGA-DZ-6135-01A
45 years, male, stage:Stage I, alive, 2269 days
523.0
TCGA-B9-A5W8-01A
50 years, male, black or african american, stage:Stage II, alive, 524 days
522.8
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
518.7
TCGA-2Z-A9JN-01A
50 years, female, black or african american, stage:Stage I, alive, 740 days
514.9
TCGA-UZ-A9Q1-01A
88 years, female, white, stage:Stage I, alive, 730 days
512.4
TCGA-B9-A44B-01A
70 years, male, black or african american, stage:Stage III, alive, 361 days
508.2
TCGA-G7-6795-01A
56 years, male, white, stage:Stage I, alive, 1194 days
507.4
TCGA-A4-7585-01A
67 years, male, white, stage:Stage III, dead, 1070 days
507.0
TCGA-A4-A5Y0-01A
61 years, female, white, stage:Stage I, alive, 252 days
499.3
TCGA-A4-7584-01A
59 years, male, black or african american, stage:Stage I, alive, 650 days
495.6
TCGA-A4-7288-01A
71 years, female, white, stage:'--, alive, 1857 days
495.1
TCGA-BQ-7049-01A
45 years, female, white, stage:Stage I, dead, 1364 days
492.2
TCGA-B9-4117-01A
48 years, female, black or african american, stage:'--, alive, 14 days
490.1
TCGA-BQ-7053-01A
57 years, female, black or african american, stage:Stage III, alive, 1516 days
488.9
TCGA-5P-A9KE-01A
70 years, male, white, stage:'--, alive, 824 days
488.4
TCGA-EV-5902-01A
58 years, male, white, stage:Stage I, alive, 578 days
488.4
TCGA-B9-A8YI-01A
79 years, male, black or african american, stage:Stage I, alive, 374 days
488.1
TCGA-A4-7286-01A
42 years, male, white, stage:'--, alive, 554 days
486.8
TCGA-IZ-8195-01A
82 years, male, white, stage:Stage II, alive, 677 days
486.1
TCGA-SX-A7SS-01A
67 years, male, white, stage:Stage I, alive, 1615 days
485.6
TCGA-AL-3471-01A
74 years, male, white, stage:Stage I, dead, 1500 days
485.0
TCGA-MH-A855-01A
52 years, female, black or african american, stage:Stage II, alive, 369 days
480.7
TCGA-BQ-5884-01A
59 years, female, black or african american, stage:Stage I, alive, 792 days
479.8
TCGA-SX-A7SL-01A
74 years, male, stage:Stage I, alive, 823 days
477.8
TCGA-P4-AAVM-01A
69 years, male, white, stage:Stage I, alive, 1539 days
476.0
TCGA-UZ-A9PM-01A
62 years, male, white, stage:Stage II, alive, 3811 days
458.2
TCGA-A4-8630-01A
59 years, female, white, stage:Stage I, alive, 436 days
446.4
TCGA-BQ-5876-01A
75 years, male, white, stage:Stage I, alive, 586 days
442.1
TCGA-DW-5560-01A
38 years, female, white, stage:Stage I, alive, 1486 days
434.4
TCGA-GL-8500-01A
63 years, male, white, stage:Stage I, alive, 841 days
433.1
TCGA-5P-A9K2-01A
62 years, male, white, stage:'--, alive, 2392 days
432.2
TCGA-5P-A9K8-01A
51 years, female, white, stage:'--, alive, 1309 days
431.0
TCGA-GL-A4EM-01A
61 years, male, white, stage:Stage I, alive, 32 days
428.8
TCGA-DZ-6134-01A
69 years, male, white, stage:Stage I, alive, 1856 days
417.3
TCGA-5P-A9K6-01A
64 years, male, white, stage:'--, alive, 1914 days
416.5
TCGA-A4-8098-01A
73 years, male, black or african american, stage:Stage I, alive, 896 days
415.9
TCGA-Y8-A8S1-01A
61 years, male, white, stage:Stage I, alive, 404 days
414.9
TCGA-A4-8518-01A
48 years, male, white, stage:Stage I, alive, 600 days
407.7
TCGA-2Z-A9JK-01A
50 years, male, white, stage:Stage III, alive, 1186 days
403.3
TCGA-P4-AAVK-01A
74 years, male, white, stage:Stage III, alive, 1590 days
400.1
TCGA-B1-A655-01A
77 years, female, white, stage:Stage I, alive, 510 days
387.0
TCGA-MH-A857-01A
63 years, male, black or african american, stage:Stage I, alive, 890 days
385.6
TCGA-J7-8537-01A
37 years, female, asian, stage:Stage III, dead, 321 days
378.6
TCGA-BQ-5881-01A
69 years, male, white, stage:Stage I, alive, 1454 days
375.6
TCGA-BQ-5886-01A
75 years, male, white, stage:Stage III, alive, 792 days
373.6
TCGA-Y8-A8RZ-01A
55 years, male, white, stage:Stage I, alive, 205 days
372.9
TCGA-BQ-7058-01A
81 years, male, white, stage:Stage III, dead, 343 days
363.3
TCGA-BQ-5883-01A
79 years, female, black or african american, stage:Stage I, alive, 1242 days
362.4
TCGA-BQ-5875-01A
66 years, female, white, stage:Stage III, alive, 2639 days
352.1
TCGA-A4-8515-01A
47 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
339.1
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
337.1
TCGA-UZ-A9Q0-01A
60 years, male, white, stage:Stage I, alive, 3368 days
332.1
TCGA-BQ-7060-01A
53 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
327.7
TCGA-5P-A9JU-01A
81 years, male, white, stage:Stage III, alive, 373 days
319.1
TCGA-A4-8311-01A
60 years, male, white, stage:Stage I, alive, 729 days
316.7
TCGA-UZ-A9PV-01A
65 years, male, white, stage:Stage I, alive, 1444 days
305.9
TCGA-BQ-7055-01A
73 years, male, white, stage:Stage I, alive, 799 days
292.7
TCGA-BQ-7045-01A
78 years, male, black or african american, stage:Stage I, dead, 1468 days
267.2
TCGA-A4-A48D-01A
84 years, male, black or african american, stage:Stage I, alive, 379 days
253.3
TCGA-B3-4103-01A
56 years, male, white, stage:Stage I, alive, 930 days
242.2
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0000640003
Tumor
1.1
CPT0001340003
Tumor
0.9
CPT0078660003
Tumor
0.8
CPT0086950003
Tumor
0.7
CPT0001540009
Tumor
0.7
CPT0024670003
Tumor
0.7
CPT0025880003
Tumor
0.7
CPT0084560003
Tumor
0.6
CPT0012280003
Tumor
0.6
CPT0025050003
Tumor
0.6
CPT0088970003
Tumor
0.6
CPT0069000003
Tumor
0.6
CPT0021240003
Tumor
0.6
CPT0079180003
Tumor
0.6
CPT0009000003
Tumor
0.6
CPT0009060003
Tumor
0.6
CPT0017410003
Tumor
0.5
CPT0081880003
Tumor
0.5
CPT0002350011
Tumor
0.5
CPT0085670003
Tumor
0.5
CPT0023350003
Tumor
0.5
CPT0065930003
Tumor
0.4
CPT0006440003
Tumor
0.4
CPT0065430003
Tumor
0.4
CPT0010160003
Tumor
0.4
CPT0012370003
Tumor
0.4
CPT0086820003
Tumor
0.4
CPT0015810003
Tumor
0.4
CPT0012550003
Tumor
0.4
CPT0026410003
Tumor
0.4
CPT0012080003
Tumor
0.4
CPT0079480003
Tumor
0.4
CPT0064370003
Tumor
0.4
CPT0088480003
Tumor
0.4
CPT0015730003
Tumor
0.3
CPT0025350003
Tumor
0.3
CPT0079270003
Tumor
0.3
CPT0025110003
Tumor
0.3
CPT0078990003
Tumor
0.3
CPT0001180009
Tumor
0.3
CPT0006630003
Tumor
0.3
CPT0079410003
Tumor
0.3
CPT0088900003
Tumor
0.3
CPT0000780007
Tumor
0.3
CPT0019990003
Tumor
0.3
CPT0075130003
Tumor
0.3
CPT0078930003
Tumor
0.3
CPT0001260009
Tumor
0.3
CPT0007320003
Tumor
0.3
CPT0077110003
Tumor
0.3
CPT0089460004
Tumor
0.3
CPT0063630003
Tumor
0.3
CPT0012900004
Tumor
0.3
CPT0014450004
Tumor
0.3
CPT0079230003
Tumor
0.2
CPT0006900003
Tumor
0.2
CPT0025230003
Tumor
0.2
CPT0019130003
Tumor
0.2
CPT0012670003
Tumor
0.2
CPT0078830003
Tumor
0.2
CPT0010110003
Tumor
0.2
CPT0001500009
Tumor
0.2
CPT0077490003
Tumor
0.2
CPT0086360003
Tumor
0.2
CPT0071150004
Tumor
0.2
CPT0011240003
Tumor
0.2
CPT0069160003
Tumor
0.2
CPT0092160003
Tumor
0.2
CPT0065810003
Tumor
0.2
CPT0007860003
Tumor
0.1
CPT0018250001
Normal
0.1
CPT0063320003
Tumor
0.1
CPT0092790003
Tumor
0.1
CPT0065750003
Tumor
0.1
CPT0088550004
Tumor
0.1
CPT0086030003
Tumor
0.1
CPT0020120003
Tumor
0.1
CPT0088760003
Tumor
0.1
CPT0088690003
Tumor
0.1
CPT0076330003
Tumor
0.1
CPT0012180003
Tumor
0.1
CPT0065870003
Tumor
0.1
CPT0025580004
Tumor
0.1
CPT0081600003
Tumor
0.1
CPT0079380003
Tumor
0.1
CPT0017850003
Tumor
0.1
CPT0077310003
Tumor
0.1
CPT0065450001
Normal
0.1
CPT0000870016
Tumor
0.1
CPT0092290003
Tumor
0.0
CPT0002270011
Tumor
0.0
CPT0017450001
Normal
0.0
CPT0014370004
Tumor
0.0
CPT0012570003
Normal
0.0
CPT0065690003
Tumor
0.0
CPT0076350001
Normal
0.0
CPT0089020003
Tumor
0.0
CPT0007870001
Normal
0.0
CPT0024680001
Normal
0.0
CPT0078530001
Normal
0.0
CPT0075720003
Tumor
0.0
CPT0000790001
Normal
0.0
CPT0012640003
Normal
0.0
CPT0087040003
Tumor
0.0
CPT0014350001
Normal
0.0
CPT0012290003
Normal
0.0
CPT0086870003
Tumor
0.0
CPT0066470004
Tumor
0.0
CPT0010170001
Normal
0.0
CPT0075560003
Tumor
0.0
CPT0079000001
Normal
0.0
CPT0020130001
Normal
0.0
CPT0001220008
Tumor
0.0
CPT0064400001
Normal
0.0
CPT0001270001
Normal
0.0
CPT0079430001
Normal
0.0
CPT0000890001
Normal
0.0
CPT0010120001
Normal
-0.1
CPT0013790003
Normal
-0.1
CPT0079510001
Normal
-0.1
CPT0023690003
Tumor
-0.1
CPT0078800003
Tumor
-0.1
CPT0078510003
Tumor
-0.1
CPT0084590001
Normal
-0.1
CPT0092730003
Tumor
-0.1
CPT0025060001
Normal
-0.1
CPT0063640001
Normal
-0.1
CPT0001350001
Normal
-0.1
CPT0092800003
Normal
-0.1
CPT0006530001
Normal
-0.1
CPT0069010001
Normal
-0.1
CPT0025170003
Tumor
-0.1
CPT0012090003
Normal
-0.1
CPT0069190001
Normal
-0.1
CPT0025610001
Normal
-0.1
CPT0012920003
Normal
-0.1
CPT0088630003
Tumor
-0.1
CPT0001190001
Normal
-0.1
CPT0092190003
Normal
-0.1
CPT0066430001
Normal
-0.2
CPT0009080003
Normal
-0.2
CPT0078670001
Normal
-0.2
CPT0082010001
Normal
-0.2
CPT0009020003
Normal
-0.2
CPT0086970003
Normal
-0.2
CPT0012770003
Normal
-0.2
CPT0006730001
Normal
-0.2
CPT0065820001
Normal
-0.2
CPT0078840001
Normal
-0.2
CPT0079300001
Normal
-0.2
CPT0011410003
Tumor
-0.2
CPT0075170001
Normal
-0.2
CPT0077140001
Normal
-0.2
CPT0088920001
Normal
-0.2
CPT0078940001
Normal
-0.2
CPT0000660001
Normal
-0.2
CPT0014160003
Tumor
-0.2
CPT0014470001
Normal
-0.2
CPT0088780001
Normal
-0.2
CPT0089480003
Normal
-0.2
CPT0081990003
Tumor
-0.2
CPT0086830003
Normal
-0.2
CPT0081620001
Normal
-0.2
CPT0092740003
Normal
-0.2
CPT0014130001
Normal
-0.2
CPT0075570001
Normal
-0.2
CPT0023360001
Normal
-0.2
CPT0007470001
Normal
-0.2
CPT0001510001
Normal
-0.2
CPT0077500001
Normal
-0.2
CPT0088710001
Normal
-0.2
CPT0015910003
Tumor
-0.2
CPT0025290003
Tumor
-0.2
CPT0002370001
Normal
-0.2
CPT0006950001
Normal
-0.2
CPT0089040001
Normal
-0.2
CPT0019160001
Normal
-0.2
CPT0023710001
Normal
-0.2
CPT0025920001
Normal
-0.2
CPT0088500001
Normal
-0.2
CPT0088570001
Normal
-0.2
CPT0066520001
Normal
-0.2
CPT0063330001
Normal
-0.3
CPT0077320001
Normal
-0.3
CPT0086890003
Normal
-0.3
CPT0026420001
Normal
-0.3
CPT0001550001
Normal
-0.3
CPT0092310003
Normal
-0.3
CPT0086370003
Normal
-0.3
CPT0001230001
Normal
-0.3
CPT0020020001
Normal
-0.3
CPT0088640003
Normal
-0.3
CPT0066480003
Tumor
-0.4
CPT0087050003
Normal
-0.4
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
