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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:87.3 nTPM
HPA Brain:114.1 nTPM
GTEx:87.3 nTPM
FANTOM5:77.9 Scaled Tags Per Million
Pig:61.3 nTPM
Mouse:34.7 nTPM
Allen mouse:4.5 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA044950
Glial cells Not detected
Neuronal cells High



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

114.1
Sample id Sample description nTPM
Caudate nucleus
nTPM: 114.1
2481 Female, age 94, left hemisphere 165.9
2288 Male, age 75, left hemisphere 128.3
1857 Female, age 85, left hemisphere 123.0
2290 Female, age 72, unknown 112.4
1854 Male, age 80, left hemisphere 109.2
1781 Male, age 74, unknown 95.3
2289 Male, age 61, right hemisphere 92.1
2846 Female, age 79, unknown 86.8
Globus pallidus, externus
nTPM: 98.7
2772 Female, age 79, unknown 125.1
1996 Male, age 80, right hemisphere 118.8
2646 Male, age 61, right hemisphere 110.6
2395 Male, age 75, both hemispheres 82.8
2567 Female, age 72, unknown 56.1
Globus pallidus, internus
nTPM: 97.5
2483 Female, age 94, right hemisphere 153.2
1818 Male, age 74, unknown 122.3
2037 Male, age 80, right hemisphere 105.1
2778 Female, age 91, both hemispheres 95.1
2287 Male, age 75, right hemisphere 91.3
2566 Female, age 72, unknown 60.6
2111 Female, age 85, right hemisphere 55.1
Nucleus accumbens
nTPM: 101.5
2286 Male, age 75, left hemisphere 127.2
1856 Female, age 91, right hemisphere 114.7
1806 Female, age 85, left hemisphere 107.0
2391 Female, age 94, left hemisphere 102.8
1783 Male, age 74, unknown 100.8
2824 Male, age 61, right hemisphere 97.5
2698 Female, age 72, unknown 92.9
2732 Male, age 80, right hemisphere 69.4
Nucleus basalis of Meynert
nTPM: 94.1
2569 Male, age 61, both hemispheres 121.4
2393 Male, age 80, right hemisphere 91.0
2484 Female, age 94, left hemisphere 89.4
2821 Male, age 75, both hemispheres 74.5
Nucleus of the diagonal band
nTPM: 83.7
2775 Male, age 80, right hemisphere 93.2
1812 Female, age 91, both hemispheres 88.4
2195 Female, age 85, both hemispheres 86.3
1979 Male, age 74, unknown 75.7
2029 Male, age 61, right hemisphere 74.9
Putamen
nTPM: 101.1
2482 Female, age 94, left hemisphere 123.7
1838 Male, age 80, right hemisphere 119.0
1937 Female, age 91, right hemisphere 113.0
2647 Male, age 75, left hemisphere 96.0
1829 Male, age 74, unknown 92.9
2466 Female, age 79, unknown 86.5
2489 Female, age 72, unknown 76.4
Septal nuclei
nTPM: 80.7
1960 Male, age 74, unknown 97.8
2031 Female, age 72, unknown 94.8
2059 Female, age 85, both hemispheres 84.2
2394 Male, age 61, left hemisphere 77.4
2009 Female, age 91, both hemispheres 71.4
2199 Male, age 80, right hemisphere 70.3
2629 Female, age 94, right hemisphere 69.4
Stria terminalis, bed nucleus
nTPM: 76.6
1974 Female, age 91, both hemispheres 88.5
2486 Female, age 94, both hemispheres 76.9
2201 Male, age 74, unknown 64.3

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

87.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 84.8
Samples: 246

Max nTPM: 210.5
Min nTPM: 36.3
Std nTPM: 30.1
Median nTPM: 78.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 210.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 190.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 183.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 177.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 165.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 162.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 162.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 155.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 153.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 151.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 145.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 141.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 140.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 136.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 135.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 135.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 134.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 133.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 132.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 130.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 128.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 127.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 126.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 122.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 121.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 120.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 120.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 120.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 119.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 118.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 118.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 117.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 117.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 117.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 115.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 115.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 115.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 115.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 114.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 113.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 113.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 112.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 111.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 110.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 110.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 109.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 108.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 108.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 108.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 107.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 107.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 107.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 107.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 106.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 105.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 104.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 104.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 103.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 103.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 103.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 103.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 102.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 102.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 100.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 99.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 99.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 99.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 98.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 95.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 95.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 95.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 95.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 95.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 95.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 94.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 94.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 94.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 93.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 93.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 93.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 93.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 93.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 93.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 93.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 93.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 92.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 92.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 91.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 91.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 91.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 90.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 90.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 89.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 89.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 88.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 88.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 88.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 87.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 87.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 87.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 86.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 86.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 86.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 85.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 85.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 84.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 84.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 83.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 83.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 83.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 81.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 81.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 81.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 80.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 80.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 80.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 80.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 80.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 80.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 79.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 79.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 79.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 79.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 78.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 78.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 78.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 78.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 78.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 77.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 77.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 77.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 76.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 76.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 76.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 76.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 75.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 75.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 74.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 74.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 74.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 74.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 73.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 72.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 72.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 72.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 72.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 72.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 70.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 70.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 70.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 70.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 70.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 70.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 69.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 69.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 69.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 69.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 68.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 68.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 68.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 68.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 67.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 67.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 67.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 67.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 67.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 66.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 66.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 66.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 66.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 65.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 65.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 65.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 65.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 64.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 64.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 64.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 64.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 63.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 62.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 62.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 62.5
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 62.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 62.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 61.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 61.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 61.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 61.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 61.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 61.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 61.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 61.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 60.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 60.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 60.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 59.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 59.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 59.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 59.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 58.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 58.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 58.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 57.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 57.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 57.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 57.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 57.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 56.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 56.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 56.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 55.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 55.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 55.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 54.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 54.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 54.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 53.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 53.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 53.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 53.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 53.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 53.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 52.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 52.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 52.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 51.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 51.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 51.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 51.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 51.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 50.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 50.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 48.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 47.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 46.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 46.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 45.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 45.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 45.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 43.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 42.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 39.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 39.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 37.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 36.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 36.3
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 83.3
Samples: 246

Max nTPM: 274.5
Min nTPM: 28.2
Std nTPM: 34.1
Median nTPM: 74.5
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 274.5
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 229.8
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 207.3
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 184.4
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 183.0
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 164.0
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 162.3
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 161.7
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 158.6
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 158.1
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 155.8
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 155.4
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 154.6
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 152.1
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 150.4
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 147.1
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 142.7
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 138.8
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 138.3
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 137.0
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 135.8
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 134.6
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 134.3
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 133.8
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 130.9
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 128.6
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 128.6
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 127.7
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 127.4
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 127.4
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 122.2
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 121.1
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 120.5
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 120.0
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 119.2
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 115.2
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 114.9
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 114.1
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 112.5
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 110.9
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 109.6
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 107.6
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 106.7
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 106.0
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 105.4
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 103.8
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 102.9
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 102.9
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 102.5
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 102.1
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 101.3
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 101.2
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 100.7
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 100.4
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 99.8
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 98.8
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 98.0
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 97.8
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 97.8
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 96.5
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 96.0
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 95.8
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 94.5
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 93.2
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 93.2
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 92.9
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 92.9
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 90.8
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 89.6
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 89.4
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 89.1
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 88.0
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 87.9
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 87.6
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 87.6
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 87.5
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 87.1
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 87.1
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 86.7
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 85.7
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 85.2
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 85.1
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 84.4
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 83.4
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 83.3
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 82.7
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 82.7
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 82.2
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 82.2
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 82.0
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 82.0
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 81.7
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 81.5
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 81.5
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 81.2
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 81.1
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 81.1
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 81.0
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 81.0
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 80.8
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 80.7
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 79.6
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 79.5
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 78.9
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 78.4
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 78.3
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 77.7
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 77.2
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 76.9
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 76.9
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 76.7
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 76.3
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 76.1
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 76.0
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 75.9
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 75.7
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 75.6
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 75.4
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 75.2
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 75.0
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 74.8
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 74.7
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 74.6
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 74.4
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 74.1
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 73.8
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 73.8
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 73.5
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 73.4
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 73.2
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 73.2
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 73.1
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 72.8
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 72.7
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 72.7
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 71.4
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 71.3
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 71.2
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 71.1
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 71.1
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 71.0
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 71.0
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 70.9
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 70.7
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 70.1
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 70.1
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 69.7
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 69.4
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 69.3
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 69.2
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 69.1
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 69.1
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 68.9
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 68.3
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 67.9
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 66.5
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 66.1
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 65.8
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 65.8
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 65.7
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 65.6
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 65.4
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 65.3
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 64.7
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 64.6
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 64.6
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 64.5
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 64.4
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 64.1
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 64.1
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 64.0
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 63.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 63.6
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 63.2
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 63.1
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 63.0
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 62.7
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 62.6
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 62.4
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 62.3
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 62.2
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 62.0
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 61.6
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 61.1
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 61.1
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 60.9
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 60.9
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 60.7
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 60.6
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 60.5
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 59.8
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 59.7
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 59.1
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 59.0
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 58.4
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 58.3
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 58.0
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 57.9
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 57.8
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 57.7
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 57.6
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 57.4
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 57.2
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 56.9
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 56.9
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 56.6
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 56.3
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 55.8
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 55.7
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 55.4
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 55.2
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 55.2
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 55.1
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 55.0
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 54.8
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 54.5
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 54.2
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 54.2
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 53.7
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 53.7
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 53.5
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 53.3
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 52.7
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 52.7
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 52.3
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 51.7
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 51.7
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 51.4
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 50.5
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 49.5
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 48.6
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 48.5
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 47.8
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 47.3
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 45.8
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 45.6
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 43.3
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 42.8
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 42.5
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 42.3
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 42.2
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 40.6
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 39.1
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 35.5
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 32.0
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 28.2
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Brain - Putamen (basal ganglia)
Average nTPM: 87.3
Samples: 205

Max nTPM: 217.2
Min nTPM: 33.3
Std nTPM: 34.4
Median nTPM: 78.9
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 217.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 215.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 200.7
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 186.5
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 186.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 183.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 179.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 178.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 165.2
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 161.7
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 156.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 153.7
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 151.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 150.9
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 147.0
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 144.3
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 143.7
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 143.3
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 135.5
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 132.5
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 131.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 128.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 128.7
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 128.4
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 127.1
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 126.0
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 125.3
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 123.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 123.1
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 120.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 119.6
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 119.1
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 116.3
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 115.5
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 114.9
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 114.7
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 113.8
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 113.6
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 110.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 110.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 109.1
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 109.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 108.9
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 108.5
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 108.3
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 108.1
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 107.4
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 106.9
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 105.9
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 105.1
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 104.7
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 104.0
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 103.9
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 103.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 101.6
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 101.6
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 101.2
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 100.2
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 96.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 94.0
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 93.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 93.5
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 92.9
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 92.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 92.7
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 92.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 91.5
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 90.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 90.8
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 90.7
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 90.4
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 90.3
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 90.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 89.9
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 89.4
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 89.3
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 88.1
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 88.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 88.0
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 87.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 86.3
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 86.0
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 85.7
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 85.4
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 85.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 83.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 83.6
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 83.5
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 83.3
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 83.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 83.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 82.6
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 82.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 81.6
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 81.3
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 80.8
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 80.7
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 79.6
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 79.5
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 79.3
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 78.9
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 78.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 78.9
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 78.0
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 77.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 77.2
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 77.2
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 76.7
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 76.0
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 75.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 75.8
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 75.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 75.5
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 74.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 74.6
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 73.7
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 73.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 73.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 73.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 72.8
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 72.6
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 71.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 71.1
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 71.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 71.0
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 70.9
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 70.6
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 70.5
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 70.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 69.9
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 69.0
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 68.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 68.3
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 68.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 67.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 67.6
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 67.6
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 67.5
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 67.1
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 67.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 67.0
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 65.9
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 65.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 65.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 65.0
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 64.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 64.5
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 64.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 64.2
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 64.1
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 63.8
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 63.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 63.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 63.3
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 63.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 62.9
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 62.7
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 62.6
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 62.5
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 62.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 62.2
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 61.9
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 61.6
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 61.0
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 60.7
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 60.4
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 60.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 60.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 60.0
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 59.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 59.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 59.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 59.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 59.0
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 58.7
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 58.6
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 58.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 58.3
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 58.2
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 58.2
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 56.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 55.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 54.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 52.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 52.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 52.4
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 51.7
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 51.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 50.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 49.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 49.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 49.8
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 49.6
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 48.2
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 47.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 47.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 47.3
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 46.5
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 46.1
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 45.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 42.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 41.6
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 41.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 37.9
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 33.3
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

77.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 77.9
FF:10164-103B2 76 years, female 77.9
Nucleus accumbens
Scaled Tags Per Million: 63.4
FF:10037-101F1 23-56 years, mixed 63.4
Putamen
Scaled Tags Per Million: 74.6
FF:10176-103C5 60 years, female 74.6
Globus pallidus
Scaled Tags Per Million: 48.7
FF:10175-103C4 60 years, female 51.0
FF:10161-103A8 76 years, female 46.4

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

61.3
Pig sample Sample description nTPM
Caudate
nTPM: 48.2
Samples: 4

Max nTPM: 56.4
Min nTPM: 42.5
Sample A Female 46.4
Sample B Female 47.5
Sample C Male 56.4
Sample D Male 42.5
Putamen
nTPM: 61.0
Samples: 4

Max nTPM: 76.9
Min nTPM: 48.9
Sample A Female 65.7
Sample B Female 48.9
Sample C Male 76.9
Sample D Male 52.3
Septum
nTPM: 61.3
Samples: 4

Max nTPM: 64.2
Min nTPM: 58.1
Sample A Female 58.1
Sample B Female 59.1
Sample C Male 64.2
Sample D Male 63.8
Ventral pallidum
nTPM: 58.9
Samples: 4

Max nTPM: 74.7
Min nTPM: 49.3
Sample A Female 51.2
Sample B Female 60.2
Sample C Male 74.7
Sample D Male 49.3

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

34.7
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 33.5
Samples: 4

Max nTPM: 38.8
Min nTPM: 25.8
Sample A Male 38.8
Sample B Male 37.5
Sample C Female 31.8
Sample D Female 25.8
Septum
nTPM: 23.2
Samples: 4

Max nTPM: 25.5
Min nTPM: 19.7
Sample A Male 23.2
Sample B Male 24.5
Sample C Female 19.7
Sample D Female 25.5
Ventral forebrain
nTPM: 34.7
Samples: 4

Max nTPM: 38.8
Min nTPM: 28.3
Sample A Male 34.0
Sample B Male 38.8
Sample C Female 37.7
Sample D Female 28.3

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

4.5
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 4.5
69262300 Antisense, RP_050303_01_G06, Mouse strain C57BL/6J (56 days, male) 4.6
77280419 Antisense, RP_070116_01_E02, Mouse strain C57BL/6J (56 days, male) 4.5
Pallidum
Expression energy: 4.2
69262300 Antisense, RP_050303_01_G06, Mouse strain C57BL/6J (56 days, male) 4.3
77280419 Antisense, RP_070116_01_E02, Mouse strain C57BL/6J (56 days, male) 4.1

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