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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
91.3
nTPM
GTEx:
91.3
nTPM
FANTOM5:
138.9
Scaled Tags Per Million
Pig:
50.7
nTPM
Mouse:
171.6
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
91.3
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 91.3
Samples: 105
Max nTPM: 140.2
Min nTPM: 57.7
Std nTPM: 17.5
Median nTPM:
308_1
70 years, female
140.2
413_1
59 years, female
138.2
491_1
89 years, female
129.5
2_1
77 years, female
127.8
139_1
64 years, female
127.2
501_1
88 years, male
125.3
495_1
57 years, female
123.3
42_1
85 years, male
122.7
315_1
62 years, female
121.9
119_1
70 years, female
121.6
17_1
71 years, male
117.6
41_1
94 years, female
113.6
99_1
64 years, male
113.5
43_1
64 years, female
113.4
120_1
70 years, female
112.6
307_1
66 years, female
110.9
89_1
63 years, male
110.3
109_1
81 years, female
110.2
145_1
84 years, male
110.2
162_1
79 years, female
109.4
142_1
61 years, female
108.8
322_1
76 years, male
104.9
4_1
88 years, female
104.1
288_1
66 years, female
103.3
415_1
77 years, female
102.2
490_1
67 years, female
102.2
149_1
88 years, male
100.8
266_1
85 years, male
100.5
518_1
75 years, female
100.5
35_1
74 years, female
100.3
317_1
60 years, male
99.8
316_1
62 years, male
99.6
313_1
79 years, female
98.2
173_1
67 years, male
97.8
379_1
60 years, male
96.8
117_1
61 years, male
96.7
81_1
67 years, male
94.5
466_1
57 years, female
94.1
18_1
88 years, male
93.9
254_1
77 years, female
92.3
153_1
70 years, female
92.2
414_1
84 years, female
92.1
499_1
55 years, female
91.8
324_1
76 years, male
91.6
347_1
72 years, male
91.6
404_1
82 years, female
91.0
447_1
81 years, male
90.4
126_1
63 years, male
90.2
384_1
83 years, male
90.1
311_1
78 years, male
89.5
506_1
65 years, male
89.0
375_1
74 years, female
88.5
377_1
82 years, female
87.8
137_1
83 years, male
87.7
32_1
67 years, male
87.4
6_1
73 years, female
87.3
452_1
88 years, female
86.8
386_1
76 years, male
86.4
9_1
66 years, female
84.9
115_1
83 years, male
84.7
314_1
67 years, male
84.2
177_1
74 years, male
83.5
189_1
76 years, male
83.4
348_1
84 years, male
83.3
321_1
62 years, female
82.8
291_1
76 years, male
82.1
517_1
88 years, male
81.3
237_1
82 years, male
80.9
251_1
78 years, male
80.6
265_1
87 years, male
80.4
353_1
82 years, female
79.8
425_1
59 years, female
79.0
218_1
71 years, female
78.3
293_1
68 years, female
78.2
405_1
91 years, male
78.1
526_1
61 years, male
77.8
264_1
73 years, female
77.7
295_1
61 years, female
77.7
335_1
73 years, female
77.7
320_1
89 years, female
77.6
229_1
69 years, female
77.5
396_1
62 years, male
77.1
376_1
75 years, female
77.0
406_1
79 years, male
76.9
480_1
63 years, male
76.2
243_1
75 years, male
75.9
286_1
68 years, female
75.8
172_1
72 years, female
75.3
389_1
86 years, female
74.9
217_1
76 years, male
74.5
394_1
75 years, female
74.0
246_1
77 years, male
73.8
292_1
71 years, male
73.8
503_1
68 years, male
72.5
351_1
91 years, male
72.3
163_1
78 years, male
72.0
355_1
70 years, female
72.0
468_1
89 years, male
71.8
356_1
87 years, female
71.5
318_1
68 years, male
70.1
354_1
81 years, female
68.7
349_1
83 years, male
67.4
350_1
84 years, female
65.0
319_1
81 years, male
62.9
352_1
62 years, male
57.7
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
