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SLC12A5
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  • SLC12A5
BRAIN CEREBELLUM Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Cerebellum
CEREBELLUM - Expression summary
Protein expression
Cerebellumi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Bergmann glia - cytoplasm/membrane: Not detected
Bergmann glia - nucleus: Not detected
GLUC cells - cytoplasm/membrane: Not detected
GLUC cells - nucleus: Not detected
Granular cells - cytoplasm/membrane: Not detected
Granular cells - nucleus: Not detected
Molecular layer - neuropil: Medium
Molecular layer cells - cytoplasm/membrane: Medium
Molecular layer cells - nucleus: Not detected
Processes in granular layer: Not detected
Processes in molecular layer: Medium
Processes in white matter: Not detected
Purkinje cells - cytoplasm/membrane: Not detected
Purkinje cells - dendrites: Not detected
Purkinje cells - nucleus: Not detected
Synaptic glomeruli - capsule: Not detected
Synaptic glomeruli - core: Medium
White matter cells - cytoplasm/membrane: Not detected
White matter cells - nucleus: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:198.0 nTPM
HPA Brain:193.3 nTPM
GTEx:198.0 nTPM
FANTOM5:278.0 Scaled Tags Per Million
Pig:120.5 nTPM
Mouse:71.9 nTPM
Allen mouse:5.2 Expression energy

CEREBELLUM - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA072058
Bergmann glia - cytoplasm/membrane Not detected
Bergmann glia - nucleus Not detected
GLUC cells - cytoplasm/membrane Not detected
GLUC cells - nucleus Not detected
Purkinje cells - cytoplasm/membrane Not detected
Purkinje cells - dendrites Not detected
Purkinje cells - nucleus Not detected
Granular cells - cytoplasm/membrane Not detected
Granular cells - nucleus Not detected
Molecular layer - neuropil Medium
Molecular layer cells - cytoplasm/membrane Medium
Molecular layer cells - nucleus Not detected
Processes in granular layer Not detected
Processes in molecular layer Medium
Processes in white matter Not detected
Synaptic glomeruli - capsule Not detected
Synaptic glomeruli - core Medium
White matter cells - cytoplasm/membrane Not detected
White matter cells - nucleus Not detected


CEREBELLUM - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

193.3
Sample id Sample description nTPM
Cerebellar cortex
nTPM: 193.3
2101 Male, age 74, right hemisphere 242.8
2055 Female, age 91, right hemisphere 226.7
1774 Male, age 80, left hemisphere 215.6
1768 Female, age 72, unknown 213.5
1769 Male, age 76, right hemisphere 205.2
2006 Male, age 61, right hemisphere 192.1
1788 Male, age 55, unknown 150.3
2003 Female, age 85, right hemisphere 100.3
Cerebellar nuclei
nTPM: 85.1
2177 Female, age 85, both hemispheres 129.2
2783 Female, age 72, unknown 109.5
2318 Male, age 74, left hemisphere 102.5
2882 Male, age 76, left hemisphere 84.5
1879 Male, age 55, unknown 82.1
1966 Female, age 91, left hemisphere 78.2
2175 Male, age 61, right hemisphere 63.2
2005 Male, age 80, left hemisphere 60.0
1871 Male, age 74, unknown 56.7
Flocculonodular lobe
nTPM: 190.1
2176 Female, age 91, right hemisphere 239.9
1771 Male, age 80, left hemisphere 218.5
1767 Male, age 76, left hemisphere 205.4
1792 Male, age 74, unknown 188.5
1835 Female, age 85, right hemisphere 171.9
1765 Male, age 55, unknown 159.3
2004 Male, age 61, right hemisphere 147.0
Vermis
nTPM: 183.2
1778 Female, age 91, left hemisphere 239.1
1751 Male, age 74, right hemisphere 227.4
1770 Male, age 76, left hemisphere 225.5
2834 Male, age 80, left hemisphere 184.9
1988 Female, age 85, left hemisphere 178.3
1928 Female, age 72, unknown 164.9
1825 Male, age 74, unknown 153.9
1766 Male, age 55, unknown 153.5
2460 Male, age 61, both hemispheres 121.7

CEREBELLUM - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

198.0
GTEx sample id Sample description nTPM
Brain - Cerebellar Hemisphere
Average nTPM: 198.0
Samples: 215

Max nTPM: 285.6
Min nTPM: 127.3
Std nTPM: 28.6
Median nTPM: 194.4
GTEX-131XW-0011-R11a-SM-5DUV9 50-59 years, female 285.6
GTEX-132Q8-0011-R11b-SM-5DUW9 60-69 years, male 282.3
GTEX-11EI6-0011-R11a-SM-DO11V 60-69 years, male 277.8
GTEX-NL4W-0011-R11A-SM-2I3DW 50-59 years, male 275.3
GTEX-ZF28-0011-R11a-SM-4WWEI 60-69 years, male 271.6
GTEX-1F75W-0011-R11b-SM-AHZ34 60-69 years, male 266.1
GTEX-1B933-0011-R11a-SM-7P8PM 50-59 years, female 264.9
GTEX-13NYS-0011-R11b-SM-5MR4P 60-69 years, male 258.9
GTEX-12WSD-0011-R11a-SM-9OSVC 60-69 years, female 252.9
GTEX-1C64N-0011-R11b-SM-7P8Q6 50-59 years, male 250.2
GTEX-11DZ1-0011-R11b-SM-DO11W 50-59 years, male 248.3
GTEX-1J8Q2-0011-R11a-SM-A9SKI 60-69 years, male 248.3
GTEX-XMD1-0011-R11A-SM-4AT5J 60-69 years, male 247.8
GTEX-1H3VE-0011-R11b-SM-C1YRP 40-49 years, male 246.3
GTEX-1I19N-0011-R11b-SM-ARU6Y 70-79 years, male 246.3
GTEX-1R9K4-0011-R11a-SM-EZ6N9 60-69 years, male 244.8
GTEX-17EVQ-0011-R11a-SM-7LT9C 70-79 years, male 244.2
GTEX-13CZV-0011-R11b-SM-5N9FN 60-69 years, male 243.0
GTEX-16NPV-0011-R11a-SM-7IGMK 50-59 years, female 242.0
GTEX-NL3H-0011-R11A-SM-2I3E6 60-69 years, male 241.8
GTEX-1H3O1-0011-R11a-SM-A96RV 60-69 years, male 240.0
GTEX-13X6J-0011-R11a-SM-5P9HE 50-59 years, male 237.9
GTEX-1GMRU-0011-R11b-SM-C1YQ4 50-59 years, male 236.6
GTEX-13JUV-0011-R11a-SM-5LZYH 40-49 years, female 235.4
GTEX-X4EP-0011-R11B-SM-4QASK 60-69 years, female 232.8
GTEX-1IOXB-0011-R11a-SM-A9G1X 50-59 years, male 232.8
GTEX-13X6I-0011-R11a-SM-5P9HN 60-69 years, male 232.6
GTEX-ZE7O-0011-R11a-SM-57WBC 50-59 years, female 231.7
GTEX-12WSH-0011-R11a-SM-5LZVM 50-59 years, male 231.3
GTEX-1H4P4-0011-R11b-SM-CE6S8 50-59 years, male 231.2
GTEX-145LU-0011-R11b-SM-5P9JX 50-59 years, male 230.3
GTEX-1F52S-0011-R11a-SM-CJI23 60-69 years, female 227.9
GTEX-18464-0011-R11a-SM-72D76 50-59 years, male 227.7
GTEX-1GF9W-0011-R11b-SM-9OSXG 60-69 years, male 226.6
GTEX-13O3O-0011-R11b-SM-5KM4G 60-69 years, female 226.3
GTEX-1GZHY-0011-R11a-SM-C1YRQ 50-59 years, female 226.3
GTEX-X585-0011-R11B-SM-46MUZ 50-59 years, male 224.9
GTEX-1GZ4I-0011-R11b-SM-9OSWR 50-59 years, male 222.8
GTEX-NPJ8-0011-R11A-SM-2YUMS 40-49 years, male 222.4
GTEX-16XZZ-0011-R11a-SM-7EPI3 60-69 years, male 221.6
GTEX-14C5O-0011-R11b-SM-6872H 60-69 years, male 221.1
GTEX-T5JC-0011-R11A-SM-32PMB 20-29 years, male 220.3
GTEX-17EVP-0011-R11a-SM-7EWDL 40-49 years, male 220.2
GTEX-ZE9C-0011-R11a-SM-4WKGG 60-69 years, male 219.5
GTEX-145MH-0011-R11a-SM-5P9HQ 50-59 years, male 218.5
GTEX-13FLV-0011-R11a-SM-5LZZ7 50-59 years, male 217.4
GTEX-ZVZQ-0011-R11a-SM-51MS6 60-69 years, female 216.7
GTEX-1LVAO-0011-R11b-SM-EXOI8 60-69 years, male 216.7
GTEX-13SLW-0011-R11a-SM-5SI8Q 70-79 years, male 216.4
GTEX-ZVT3-0011-R11b-SM-57WBI 60-69 years, female 216.3
GTEX-13NZA-0011-R11b-SM-5KM4W 60-69 years, male 216.0
GTEX-1F7RK-0011-R11b-SM-9QEI2 20-29 years, female 215.4
GTEX-17JCI-0011-R11a-SM-7189Y 60-69 years, female 215.3
GTEX-OHPN-0011-R11A-SM-2I5FM 60-69 years, female 215.3
GTEX-11EMC-0011-R11b-SM-DNZZK 60-69 years, female 215.1
GTEX-13QIC-0011-R11b-SM-5O9BU 60-69 years, female 213.4
GTEX-1ICLZ-0011-R11a-SM-CJI3N 60-69 years, male 213.4
GTEX-1HGF4-0011-R11a-SM-C1YRR 60-69 years, male 213.1
GTEX-12WSF-0011-R11a-SM-5LZVT 70-79 years, male 212.5
GTEX-1LKK1-0011-R11a-SM-EXOIG 50-59 years, female 211.3
GTEX-WWYW-0011-R11A-SM-3NB38 50-59 years, female 211.1
GTEX-N7MS-0011-R11A-SM-2HMJS 60-69 years, male 211.0
GTEX-1313W-0011-R11a-SM-5DUXN 50-59 years, female 210.1
GTEX-1BAJH-0011-R11b-SM-7IGLM 70-79 years, male 209.2
GTEX-13OVH-0011-R11b-SM-5KM4X 70-79 years, male 208.8
GTEX-1IKOH-0011-R11a-SM-AHZ38 60-69 years, female 208.5
GTEX-1B8SG-0011-R11a-SM-7P8PF 50-59 years, male 208.1
GTEX-18A6Q-0011-R11a-SM-72D6H 60-69 years, male 207.5
GTEX-1F6I4-0011-R11b-SM-9OSWS 60-69 years, male 207.4
GTEX-131XH-0011-R11a-SM-5EGLN 50-59 years, male 207.2
GTEX-X261-0011-R11A-SM-4E3JY 50-59 years, male 206.6
GTEX-139TT-0011-R11b-SM-5LZV1 60-69 years, male 205.8
GTEX-14BIM-0011-R11b-SM-5S2RN 60-69 years, female 205.4
GTEX-1A3MX-0011-R11b-SM-7DUGP 60-69 years, male 205.1
GTEX-1J1OQ-0011-R11a-SM-A96S3 40-49 years, female 204.6
GTEX-11WQC-0011-R11b-SM-57WD6 60-69 years, male 204.2
GTEX-1GMR8-0011-R11b-SM-9OSX2 50-59 years, female 204.0
GTEX-13G51-0011-R11b-SM-5J2NE 60-69 years, male 203.8
GTEX-1399T-0011-R11a-SM-5J2O1 60-69 years, male 203.6
GTEX-13FHO-0011-R11b-SM-5LZYQ 60-69 years, male 203.4
GTEX-144GL-0011-R11b-SM-5P9F6 50-59 years, male 203.2
GTEX-1M4P7-0011-R11b-SM-EXOIK 60-69 years, male 203.0
GTEX-11PRG-0011-R11b-SM-DNZZY 50-59 years, male 202.9
GTEX-13CF2-0011-R11b-SM-5LZXO 60-69 years, male 201.8
GTEX-1KD4Q-0011-R11b-SM-EXOIE 40-49 years, male 201.6
GTEX-13NYB-0011-R11a-SM-5KM3Q 40-49 years, male 201.0
GTEX-1B8SF-0011-R11a-SM-79OOP 60-69 years, male 201.0
GTEX-13SLX-0011-R11b-SM-5O9C8 50-59 years, female 200.6
GTEX-11OF3-0011-R11a-SM-57WCR 60-69 years, male 200.1
GTEX-12ZZZ-0011-R11a-SM-5EGLC 60-69 years, male 200.1
GTEX-1E1VI-0011-R11a-SM-9OSWI 50-59 years, male 200.0
GTEX-14ASI-0011-R11b-SM-6AJBJ 60-69 years, male 199.7
GTEX-NPJ7-0011-R11A-SM-2I3E8 60-69 years, female 199.7
GTEX-WZTO-0011-R11A-SM-4E3K9 40-49 years, male 199.3
GTEX-16GPK-0011-R11b-SM-7MKFF 60-69 years, male 198.9
GTEX-1F75A-0011-R11a-SM-AHZ35 50-59 years, male 198.7
GTEX-145MI-0011-R11a-SM-5P9JZ 60-69 years, female 198.6
GTEX-1IL2V-0011-R11a-SM-ARU6T 70-79 years, male 198.6
GTEX-14E6D-0011-R11b-SM-664NP 50-59 years, male 198.4
GTEX-13VXU-0011-R11b-SM-5O9DJ 50-59 years, male 197.4
GTEX-1IY9M-0011-R11b-SM-A96TI 60-69 years, male 197.1
GTEX-1GN73-0011-R11b-SM-9OSX4 60-69 years, male 196.8
GTEX-13RTJ-0011-R11a-SM-5O9CK 60-69 years, male 196.7
GTEX-15CHQ-0011-R11b-SM-686ZZ 60-69 years, male 196.1
GTEX-1JJEA-0011-R11a-SM-EXUTE 60-69 years, male 196.1
GTEX-1I1GV-0011-R11a-SM-CJI3Z 60-69 years, male 195.9
GTEX-14ABY-0011-R11a-SM-5SI7C 50-59 years, male 195.8
GTEX-YJ89-0011-R11a-SM-4SOKA 60-69 years, male 194.4
GTEX-1H1CY-0011-R11a-SM-C1YQR 60-69 years, female 194.0
GTEX-1HFI6-0011-R11b-SM-A96RU 40-49 years, male 194.0
GTEX-1HCU6-0011-R11b-SM-AHZ2F 60-69 years, female 193.8
GTEX-1HSKV-0011-R11b-SM-AHZ2E 60-69 years, male 193.8
GTEX-1CB4G-0011-R11a-SM-9OSWG 60-69 years, male 193.5
GTEX-1HUB1-0011-R11b-SM-CE6SC 60-69 years, male 193.4
GTEX-12WSE-0011-R11b-SM-5P9JW 20-29 years, male 193.3
GTEX-1JJ6O-0011-R11b-SM-EXUS2 60-69 years, male 193.3
GTEX-1H3NZ-0011-R11b-SM-CE6SF 60-69 years, male 191.5
GTEX-1I1HK-0011-R11a-SM-B2LVN 60-69 years, male 191.4
GTEX-1I1GR-0011-R11a-SM-CM2T5 60-69 years, male 191.0
GTEX-16YQH-0011-R11b-SM-7LT98 30-39 years, male 190.6
GTEX-13JVG-0011-R11a-SM-5KM53 60-69 years, male 190.5
GTEX-13S7M-0011-R11b-SM-5P9HU 60-69 years, female 190.4
GTEX-1HBPI-0011-R11b-SM-CE6SH 50-59 years, male 190.4
GTEX-131YS-0011-R11b-SM-5EGLM 60-69 years, female 190.1
GTEX-11TTK-0011-R11b-SM-DO112 60-69 years, female 190.0
GTEX-13FXS-0011-R11a-SM-5L3DM 50-59 years, male 189.8
GTEX-X4XX-0011-R11A-SM-46MWQ 60-69 years, male 189.7
GTEX-183WM-0011-R11a-SM-718A5 70-79 years, female 189.5
GTEX-13FHP-0011-R11b-SM-5LZXP 50-59 years, male 189.1
GTEX-Z93S-0011-R11a-SM-4RGNN 50-59 years, male 189.0
GTEX-Q2AG-0011-R11A-SM-2HMKZ 40-49 years, female 188.9
GTEX-13OW5-0011-R11b-SM-5L3GG 60-69 years, male 188.7
GTEX-1CAV2-0011-R11a-SM-ARU8D 40-49 years, female 188.4
GTEX-13PVQ-0011-R11a-SM-5O9DU 50-59 years, male 188.3
GTEX-P44G-0011-R11A-SM-2I3FD 30-39 years, male 188.2
GTEX-11ZTS-0011-R11a-SM-DO113 60-69 years, female 188.0
GTEX-1JMOU-0011-R11b-SM-EXUTA 60-69 years, female 186.8
GTEX-1N2DW-0011-R11b-SM-EXOIL 50-59 years, male 186.5
GTEX-13PLJ-0011-R11b-SM-5O9BS 60-69 years, female 186.0
GTEX-1B8L1-0011-R11b-SM-793DJ 60-69 years, male 185.0
GTEX-1LSVX-0011-R11b-SM-EXOIA 60-69 years, male 184.5
GTEX-ZUA1-0011-R11b-SM-51MTI 40-49 years, male 183.2
GTEX-14BIN-0011-R11a-SM-5SI79 50-59 years, female 182.8
GTEX-15DYW-0011-R11a-SM-6LPIT 60-69 years, female 182.8
GTEX-13OW6-0011-R11a-SM-5L3H2 50-59 years, male 182.7
GTEX-1LG7Y-0011-R11a-SM-EXOIH 50-59 years, male 182.6
GTEX-11GSP-0011-R11b-SM-5NQ7V 60-69 years, female 182.1
GTEX-14DAQ-0011-R11a-SM-664NO 60-69 years, female 182.0
GTEX-12WSC-0011-R11a-SM-5GU5J 50-59 years, male 181.9
GTEX-13OW7-0011-R11a-SM-5O9DY 50-59 years, male 181.8
GTEX-WHSE-0011-R11A-SM-3P5YY 20-29 years, male 181.8
GTEX-Y8DK-0011-R11A-SM-4SOK2 60-69 years, male 180.8
GTEX-1N2EE-0011-R11b-SM-EXOIJ 60-69 years, male 180.6
GTEX-1AX9I-0011-R11b-SM-7DHN4 60-69 years, male 180.0
GTEX-18465-0011-R11a-SM-72D78 50-59 years, male 179.3
GTEX-ZDXO-0011-R11a-SM-4WWD9 60-69 years, male 179.3
GTEX-12WSI-0011-R11b-SM-5P9EZ 50-59 years, male 179.0
GTEX-13OVL-0011-R11b-SM-5L3G7 50-59 years, male 179.0
GTEX-WL46-0011-R11A-SM-3MJFT 50-59 years, male 178.8
GTEX-1IDJH-0011-R11b-SM-C1YRT 70-79 years, male 178.7
GTEX-1JMQJ-0011-R11a-SM-EXOJY 50-59 years, male 178.7
GTEX-13OW8-0011-R11a-SM-5L3GT 60-69 years, male 178.0
GTEX-S7SE-0011-R11A-SM-2XCDD 50-59 years, male 177.8
GTEX-1J8EW-0011-R11a-SM-AHZ37 60-69 years, female 177.8
GTEX-1I1GQ-0011-R11b-SM-CKZPA 50-59 years, male 177.6
GTEX-13FTY-0011-R11a-SM-5IJEA 40-49 years, female 177.4
GTEX-1I1GS-0011-R11a-SM-C1YRU 60-69 years, male 177.3
GTEX-QMR6-0011-R11A-SM-32PKK 50-59 years, male 177.2
GTEX-1IGQW-0011-R11a-SM-C1YRV 60-69 years, male 176.8
GTEX-12ZZX-0011-R11a-SM-5DUVJ 40-49 years, female 176.5
GTEX-UTHO-0011-R11A-SM-3GIJE 60-69 years, male 176.2
GTEX-11ZUS-0011-R11b-SM-5BC7B 30-39 years, male 175.8
GTEX-13O3Q-0011-R11b-SM-5KM2W 50-59 years, male 175.5
GTEX-16Z82-0011-R11a-SM-79OKJ 60-69 years, male 174.6
GTEX-13X6K-0011-R11a-SM-5P9F5 60-69 years, female 174.4
GTEX-1EMGI-0011-R11b-SM-9OSWX 60-69 years, male 174.0
GTEX-17HII-0011-R11b-SM-7KFSX 50-59 years, male 173.4
GTEX-12126-0011-R11a-SM-5BC6X 20-29 years, male 173.1
GTEX-139UW-0011-R11a-SM-5IJGN 60-69 years, male 173.1
GTEX-1GTWX-0011-R11b-SM-C1YQJ 60-69 years, male 170.1
GTEX-11DYG-0011-R11a-SM-DNZZP 60-69 years, male 169.6
GTEX-1F48J-0011-R11b-SM-9OSWV 50-59 years, female 169.1
GTEX-11DXY-0011-R11a-SM-DNZZN 60-69 years, male 168.6
GTEX-14PN4-0011-R11a-SM-686ZW 50-59 years, male 168.2
GTEX-17F97-0011-R11b-SM-7KFRQ 50-59 years, male 168.1
GTEX-YFC4-0011-R11a-SM-4SOK6 40-49 years, female 168.1
GTEX-1R9PO-0011-R11b-SM-EZ6NB 60-69 years, female 167.8
GTEX-15G19-0011-R11b-SM-6LPIH 60-69 years, male 167.5
GTEX-1H1DG-0011-R11a-SM-C1YQK 70-79 years, male 167.3
GTEX-14E7W-0011-R11a-SM-5ZZVA 70-79 years, male 167.2
GTEX-1IKK5-0011-R11a-SM-C1YRX 60-69 years, male 166.6
GTEX-13N2G-0011-R11a-SM-5MR3F 60-69 years, male 166.4
GTEX-ZAB4-0011-R11a-SM-4SOKI 40-49 years, male 166.1
GTEX-1IL2U-0011-R11a-SM-CE6SO 60-69 years, male 166.0
GTEX-RVPV-0011-R11A-SM-2TF6F 60-69 years, male 164.6
GTEX-R55E-0011-R11A-SM-2TC6I 20-29 years, male 164.2
GTEX-15EO6-0011-R11b-SM-6M47M 50-59 years, male 164.1
GTEX-WVLH-0011-R11A-SM-3MJFO 50-59 years, male 163.0
GTEX-T2IS-0011-R11A-SM-32QPC 20-29 years, female 162.9
GTEX-12WSM-0011-R11a-SM-5DUX8 60-69 years, male 161.6
GTEX-RU72-0011-R11A-SM-CM2U1 50-59 years, female 161.3
GTEX-1H1ZS-0011-R11a-SM-C1YQM 70-79 years, male 161.0
GTEX-1EKGG-0011-R11a-SM-9QEHZ 60-69 years, male 160.9
GTEX-13OVJ-0011-R11a-SM-5P9H8 50-59 years, female 159.3
GTEX-T6MN-0011-R11A-SM-32QOX 50-59 years, male 155.6
GTEX-1HB9E-0011-R11b-SM-ARU79 50-59 years, male 155.2
GTEX-17HG3-0011-R11b-SM-7KFT4 30-39 years, female 154.9
GTEX-11H98-0011-R11b-SM-5NQ6U 50-59 years, male 153.6
GTEX-15ER7-0011-R11a-SM-6LPIL 20-29 years, female 151.7
GTEX-TSE9-0011-R11A-SM-3DB7N 60-69 years, female 151.3
GTEX-15DCD-0011-R11a-SM-D4P1R 70-79 years, female 146.9
GTEX-P44H-0011-R11A-SM-2XCER 40-49 years, male 145.4
GTEX-QDT8-0011-R11A-SM-32PKD 30-39 years, female 137.2
GTEX-14C39-0011-R11b-SM-5YYAF 40-49 years, male 132.5
GTEX-N7MT-0011-R11A-SM-2I3DZ 60-69 years, female 127.3
Show allShow less
Brain - Cerebellum
Average nTPM: 188.4
Samples: 241

Max nTPM: 298.6
Min nTPM: 117.7
Std nTPM: 21.9
Median nTPM: 188.6
GTEX-11OC5-0626-SM-5HL6M 60-69 years, male 298.6
GTEX-XMD1-2826-SM-4AT5F 60-69 years, male 252.9
GTEX-1HSMO-2926-SM-C1YR5 60-69 years, male 250.6
GTEX-13NYB-3226-SM-5J2ND 40-49 years, male 250.3
GTEX-T5JC-2326-SM-32PMR 20-29 years, male 243.2
GTEX-1F52S-3026-SM-7P8PV 60-69 years, female 239.1
GTEX-11EI6-2926-SM-5985U 60-69 years, male 238.1
GTEX-X4EP-3026-SM-3P5YP 60-69 years, female 237.3
GTEX-1RNSC-3126-SM-EVR4V 60-69 years, male 236.0
GTEX-ZYFD-2926-SM-5GID9 50-59 years, male 229.7
GTEX-14E6D-2926-SM-664OP 50-59 years, male 228.4
GTEX-14C5O-2926-SM-5RQI1 60-69 years, male 228.2
GTEX-11DZ1-2926-SM-5A5KI 50-59 years, male 227.5
GTEX-X261-3126-SM-4PQZC 50-59 years, male 224.1
GTEX-WL46-2826-SM-3LK81 50-59 years, male 223.7
GTEX-1C64N-3126-SM-79OO3 50-59 years, male 223.6
GTEX-16XZZ-2926-SM-6LPK4 60-69 years, male 222.4
GTEX-1IKOH-2826-SM-CNNRC 60-69 years, female 222.1
GTEX-1192X-3226-SM-5987D 50-59 years, male 221.1
GTEX-1E1VI-2926-SM-7IGLT 50-59 years, male 219.3
GTEX-13OW5-3126-SM-5MR3Y 60-69 years, male 218.7
GTEX-1A3MX-2926-SM-718B7 60-69 years, male 217.0
GTEX-1EX96-3126-SM-9JGGC 50-59 years, male 215.5
GTEX-1KANB-3226-SM-D4P3G 50-59 years, male 214.3
GTEX-12ZZZ-3126-SM-5LZU6 60-69 years, male 213.5
GTEX-13O3O-3026-SM-5KM42 60-69 years, female 213.3
GTEX-1MJK2-3026-SM-EV7A5 50-59 years, male 211.2
GTEX-XLM4-2926-SM-4AT59 60-69 years, male 210.1
GTEX-1F75W-3126-SM-7P8SJ 60-69 years, male 209.9
GTEX-14JFF-2826-SM-6871Q 60-69 years, male 208.7
GTEX-1GZHY-3026-SM-7MXVA 50-59 years, female 207.8
GTEX-Y111-2826-SM-4TT3O 50-59 years, male 207.5
GTEX-YJ89-2926-SM-5P9IT 60-69 years, male 207.5
GTEX-1B8SG-1926-SM-73KUB 50-59 years, male 207.4
GTEX-1H3O1-1826-SM-A96TO 60-69 years, male 207.0
GTEX-1GZ2Q-3026-SM-9JGG3 40-49 years, male 206.6
GTEX-1GN73-3026-SM-7MXV8 60-69 years, male 205.9
GTEX-11ZTS-3226-SM-5EGID 60-69 years, female 204.5
GTEX-14BIM-3126-SM-5Q5C7 60-69 years, female 204.2
GTEX-12WSH-3126-SM-5LZW8 50-59 years, male 203.5
GTEX-UTHO-2926-SM-3P5Z9 60-69 years, male 203.5
GTEX-1F75A-2926-SM-7MXVN 50-59 years, male 203.5
GTEX-13OVH-2926-SM-5IJFH 70-79 years, male 203.1
GTEX-X4XX-2926-SM-3NMB1 60-69 years, male 202.9
GTEX-1B8L1-3226-SM-7P8OX 60-69 years, male 202.8
GTEX-132Q8-2926-SM-5IFFP 60-69 years, male 202.6
GTEX-1H4P4-2726-SM-9JGGB 50-59 years, male 202.6
GTEX-131XH-2926-SM-5LZU4 50-59 years, male 202.5
GTEX-1F6IF-3026-SM-7P8QN 60-69 years, male 202.4
GTEX-1JMQJ-3126-SM-EV79G 50-59 years, male 201.8
GTEX-1313W-3026-SM-5LZUZ 50-59 years, female 201.5
GTEX-11EMC-3326-SM-5P9JH 60-69 years, female 201.3
GTEX-11DXW-1026-SM-5H11K 40-49 years, male 201.1
GTEX-1C6VR-3026-SM-7IGLW 60-69 years, male 200.6
GTEX-14JIY-2326-SM-6AJAJ 60-69 years, male 200.4
GTEX-1H3NZ-2926-SM-9WPQ8 60-69 years, male 200.3
GTEX-11O72-2826-SM-5HL6W 40-49 years, male 199.7
GTEX-147F4-3026-SM-5Q5BJ 50-59 years, male 199.7
GTEX-16YQH-2926-SM-6LPJE 30-39 years, male 199.6
GTEX-13FHP-2926-SM-5IJG9 50-59 years, male 199.4
GTEX-NPJ8-2626-SM-2D7W2 40-49 years, male 199.2
GTEX-1RDX4-3226-SM-DPS14 50-59 years, female 198.9
GTEX-1IL2V-3026-SM-CYPSA 70-79 years, male 198.7
GTEX-1QEPI-3026-SM-EXOIW 60-69 years, female 198.7
GTEX-1399T-3126-SM-5IJFS 60-69 years, male 198.4
GTEX-1HBPH-3026-SM-9WPNY 40-49 years, female 198.0
GTEX-1LSVX-2826-SM-EVR58 60-69 years, male 197.9
GTEX-13PVQ-2926-SM-5L3HJ 50-59 years, male 197.8
GTEX-1C6WA-3326-SM-7MKGN 60-69 years, male 197.4
GTEX-Z93S-2826-SM-57WBL 50-59 years, male 197.3
GTEX-1128S-2826-SM-5N9DI 60-69 years, female 196.9
GTEX-T6MN-2526-SM-32PMN 50-59 years, male 196.5
GTEX-1H1DG-2826-SM-9JGHB 70-79 years, male 196.3
GTEX-13112-2926-SM-5DUWT 50-59 years, male 196.2
GTEX-13FHO-2926-SM-5L3ES 60-69 years, male 196.2
GTEX-13S7M-3026-SM-5S2QQ 60-69 years, female 196.2
GTEX-1I1CD-2926-SM-A96SJ 60-69 years, female 195.3
GTEX-1KD4Q-3026-SM-EV7A7 40-49 years, male 195.2
GTEX-ZAJG-3026-SM-5HL92 50-59 years, female 195.1
GTEX-1I1GV-3026-SM-CNNR9 60-69 years, male 195.1
GTEX-1JMPZ-2826-SM-C1YRA 30-39 years, male 195.1
GTEX-14ABY-3026-SM-664NE 50-59 years, male 195.0
GTEX-15EO6-2926-SM-6M48D 50-59 years, male 195.0
GTEX-ZUA1-2926-SM-59HL3 40-49 years, male 194.8
GTEX-12WSE-2926-SM-5RQJ9 20-29 years, male 194.7
GTEX-145LU-2626-SM-5LU9Z 50-59 years, male 194.7
GTEX-17F97-2926-SM-7DUEQ 50-59 years, male 194.7
GTEX-1GZ4I-2926-SM-9JGGO 50-59 years, male 194.5
GTEX-1E2YA-2926-SM-7MGWX 50-59 years, male 194.0
GTEX-1GF9V-3026-SM-7P8R8 60-69 years, male 193.9
GTEX-11TTK-2826-SM-5GU5K 60-69 years, female 193.7
GTEX-ZAK1-2926-SM-5HL9S 50-59 years, female 193.6
GTEX-ZZPT-2926-SM-5EQ5S 50-59 years, male 193.6
GTEX-WWYW-3026-SM-3NB36 50-59 years, female 193.3
GTEX-1P4AB-3026-SM-EXOJS 50-59 years, male 193.3
GTEX-11ONC-3026-SM-5985W 60-69 years, male 192.7
GTEX-13OW7-2926-SM-5MR3Z 50-59 years, male 192.7
GTEX-13FXS-3026-SM-5LZYO 50-59 years, male 192.5
GTEX-17JCI-3026-SM-7EWDR 60-69 years, female 192.3
GTEX-12WSC-2926-SM-5BC5Z 50-59 years, male 192.2
GTEX-117XS-3126-SM-5GIDP 60-69 years, male 192.0
GTEX-13QIC-3026-SM-5LU58 60-69 years, female 191.8
GTEX-12126-0926-SM-5FQTW 20-29 years, male 191.7
GTEX-17EVP-2926-SM-793BU 40-49 years, male 191.6
GTEX-1B8SF-3026-SM-731DX 60-69 years, male 191.4
GTEX-1JJEA-2926-SM-C1YSK 60-69 years, male 191.2
GTEX-1JMQK-2926-SM-D4P2T 60-69 years, male 190.8
GTEX-145MF-2826-SM-7EPGU 50-59 years, male 190.7
GTEX-12ZZY-2926-SM-5DUXO 60-69 years, male 190.6
GTEX-1LG7Y-3126-SM-EV7AS 50-59 years, male 190.5
GTEX-18465-2926-SM-7KFSE 50-59 years, male 190.3
GTEX-1B933-3026-SM-731DB 50-59 years, female 190.2
GTEX-17EVQ-2726-SM-7EWDT 70-79 years, male 189.9
GTEX-1POEN-2726-SM-E9U6B 30-39 years, female 189.8
GTEX-WHSE-2926-SM-3NMBG 20-29 years, male 189.7
GTEX-13G51-3126-SM-5IJG7 60-69 years, male 189.6
GTEX-14ASI-2926-SM-5Q5DG 60-69 years, male 189.5
GTEX-11GSO-3026-SM-5Q5AL 60-69 years, male 189.3
GTEX-145LS-3026-SM-5O99S 60-69 years, female 189.0
GTEX-139TS-3126-SM-5LZWX 60-69 years, male 188.9
GTEX-13X6I-2926-SM-5Q5C3 60-69 years, male 188.6
GTEX-17HG3-2826-SM-7EPGO 30-39 years, female 188.6
GTEX-16Z82-2926-SM-6LPJJ 60-69 years, male 188.4
GTEX-ZDXO-2926-SM-4WKFM 60-69 years, male 188.4
GTEX-1EU9M-2926-SM-793DF 60-69 years, male 187.5
GTEX-11ZVC-3026-SM-59HJM 50-59 years, female 187.4
GTEX-ZVT3-2926-SM-5GU6M 60-69 years, female 187.1
GTEX-14A5I-2826-SM-5SIBF 50-59 years, female 186.9
GTEX-183WM-2726-SM-7KFRF 70-79 years, female 186.8
GTEX-111FC-3326-SM-5GZYV 60-69 years, male 186.0
GTEX-13SLX-3226-SM-5YYA6 50-59 years, female 185.5
GTEX-ZF28-2926-SM-4WKG1 60-69 years, male 185.1
GTEX-11ZUS-2826-SM-5EQKW 30-39 years, male 185.0
GTEX-1I1HK-2726-SM-AHZ2M 60-69 years, male 184.5
GTEX-1H1CY-3026-SM-9OSW7 60-69 years, female 184.4
GTEX-11GSP-3126-SM-5A5LL 60-69 years, female 183.9
GTEX-145MH-2926-SM-5Q5D2 50-59 years, male 183.3
GTEX-1NV8Z-3026-SM-DTX8Z 60-69 years, male 183.3
GTEX-1IY9M-3126-SM-AHZ3A 60-69 years, male 183.1
GTEX-11NUK-3026-SM-5986K 50-59 years, male 182.8
GTEX-13CF2-3026-SM-5IFFX 60-69 years, male 181.9
GTEX-13JVG-3226-SM-5IJGJ 60-69 years, male 181.9
GTEX-1JJ6O-3026-SM-C1YQH 60-69 years, male 181.9
GTEX-1JMLX-3026-SM-EV79Q 50-59 years, male 181.8
GTEX-13VXU-3026-SM-5LU3K 50-59 years, male 181.7
GTEX-17HHY-2926-SM-79OJW 50-59 years, male 181.7
GTEX-17HII-2926-SM-79OMK 50-59 years, male 181.6
GTEX-1A8G7-3026-SM-73KTT 60-69 years, male 181.6
GTEX-1J1OQ-3126-SM-D4P2O 40-49 years, female 181.2
GTEX-147GR-3126-SM-5S2PM 60-69 years, male 181.1
GTEX-1RQEC-3026-SM-DPRXM 60-69 years, male 181.0
GTEX-14BIN-3326-SM-5Q5E6 50-59 years, female 180.5
GTEX-1QP6S-3026-SM-EAZ4N 40-49 years, male 180.5
GTEX-145MG-3126-SM-5Q5D3 50-59 years, male 180.3
GTEX-PWO3-1026-SM-2I5F2 60-69 years, female 180.3
GTEX-144GL-2926-SM-5O99F 50-59 years, male 180.2
GTEX-13RTJ-3126-SM-5S2Q4 60-69 years, male 179.9
GTEX-PVOW-2626-SM-32PL8 40-49 years, male 179.6
GTEX-13O3Q-3026-SM-5IJGD 50-59 years, male 179.3
GTEX-WZTO-2826-SM-3NM8P 40-49 years, male 179.3
GTEX-Y8DK-0726-SM-4TT3S 60-69 years, male 179.3
GTEX-131YS-3026-SM-5EGHY 60-69 years, female 179.1
GTEX-1JMOU-2826-SM-EV79R 60-69 years, female 178.8
GTEX-1EWIQ-3026-SM-7IGOJ 70-79 years, female 178.6
GTEX-ZAB4-2926-SM-57WCV 40-49 years, male 178.5
GTEX-13X6K-2826-SM-5O9DS 60-69 years, female 178.3
GTEX-1HBPI-2726-SM-9WPPF 50-59 years, male 178.3
GTEX-14E7W-2926-SM-5S2R8 70-79 years, male 176.9
GTEX-1269C-3126-SM-5EGI6 60-69 years, female 176.8
GTEX-15G19-2826-SM-6M48K 60-69 years, male 176.8
GTEX-N7MS-2526-SM-2D7W3 60-69 years, male 176.6
GTEX-1EMGI-3126-SM-7MXUR 60-69 years, male 176.2
GTEX-12ZZX-2826-SM-5BC6K 40-49 years, female 176.0
GTEX-14PN4-3026-SM-664O4 50-59 years, male 176.0
GTEX-1CB4H-3026-SM-79OLX 60-69 years, female 175.9
GTEX-1F6I4-3026-SM-7P8SI 60-69 years, male 175.7
GTEX-1KWVE-2226-SM-CXZKN 30-39 years, male 175.2
GTEX-13OVL-3026-SM-5IJF1 50-59 years, male 175.1
GTEX-11NV4-2226-SM-5BC4T 60-69 years, male 174.9
GTEX-14DAQ-3026-SM-5S2QZ 60-69 years, female 174.8
GTEX-12WSD-3026-SM-5LZU7 60-69 years, female 174.6
GTEX-WVLH-2926-SM-3MJG5 50-59 years, male 174.2
GTEX-P44G-2526-SM-2I5EK 30-39 years, male 174.1
GTEX-T2IS-2926-SM-32QPO 20-29 years, female 174.1
GTEX-1PIIG-2826-SM-DTX7O 30-39 years, male 174.0
GTEX-139TT-2626-SM-5LZUB 60-69 years, male 173.7
GTEX-1CB4G-2926-SM-7MKFQ 60-69 years, male 173.6
GTEX-OHPN-2626-SM-2I5H1 60-69 years, female 173.3
GTEX-S7SE-2526-SM-2XCDL 50-59 years, male 173.3
GTEX-YFC4-3026-SM-5IFJK 40-49 years, female 172.8
GTEX-14BMV-2926-SM-5TDEE 50-59 years, male 172.3
GTEX-1JN1M-3126-SM-AHZ4E 60-69 years, female 171.9
GTEX-1B996-2926-SM-7MXUH 60-69 years, male 171.8
GTEX-13X6J-2926-SM-7EPGP 50-59 years, male 170.9
GTEX-R55E-2526-SM-2TC6H 20-29 years, male 170.9
GTEX-1BAJH-3126-SM-7MGXY 70-79 years, male 170.8
GTEX-13OW8-2926-SM-5L3FV 60-69 years, male 170.5
GTEX-1JJE9-3026-SM-CNNPA 70-79 years, male 170.1
GTEX-1HCVE-2926-SM-9WPPJ 50-59 years, male 169.8
GTEX-1GF9W-2726-SM-9JGGW 60-69 years, male 169.5
GTEX-13OW6-2926-SM-5KM29 50-59 years, male 169.3
GTEX-11PRG-2826-SM-5BC54 50-59 years, male 169.1
GTEX-1F48J-2726-SM-7P8PW 50-59 years, female 168.5
GTEX-11DXY-3126-SM-5N9BT 60-69 years, male 168.4
GTEX-1PWST-3026-SM-EAZ3H 70-79 years, male 168.2
GTEX-14PJM-3026-SM-6LLHM 50-59 years, female 168.1
GTEX-NPJ7-2826-SM-2I3FU 60-69 years, female 167.2
GTEX-RNOR-2226-SM-2TF5O 50-59 years, female 166.6
GTEX-1R46S-3126-SM-DPRZ9 60-69 years, female 166.6
GTEX-1HSKV-2926-SM-B2LWJ 60-69 years, male 166.2
GTEX-1IDJH-3126-SM-C1YQS 70-79 years, male 166.1
GTEX-14C39-3026-SM-5S2QE 40-49 years, male 165.8
GTEX-ZYY3-3026-SM-5GIEJ 60-69 years, female 165.7
GTEX-1GTWX-2926-SM-7MXV4 60-69 years, male 165.6
GTEX-N7MT-1226-SM-DKPOK 60-69 years, female 165.3
GTEX-QVJO-1325-SM-2S1QX 60-69 years, female 165.2
GTEX-14JG1-2926-SM-686ZK 40-49 years, male 164.5
GTEX-QVUS-2926-SM-3GIJB 60-69 years, female 164.1
GTEX-18A6Q-2826-SM-7LTAO 60-69 years, male 163.8
GTEX-12WSM-2126-SM-5GCOC 60-69 years, male 163.7
GTEX-11DYG-2926-SM-5H132 60-69 years, male 163.0
GTEX-Q2AG-2826-SM-2HMJQ 40-49 years, female 162.7
GTEX-1EKGG-3126-SM-9WPO5 60-69 years, male 162.5
GTEX-15ER7-3026-SM-6M47W 20-29 years, female 162.1
GTEX-1R9PO-2826-SM-E6CPV 60-69 years, female 159.6
GTEX-13N2G-3126-SM-5IJGL 60-69 years, male 159.4
GTEX-15DYW-3026-SM-7KFRM 60-69 years, female 157.9
GTEX-TSE9-2926-SM-3DB77 60-69 years, female 155.8
GTEX-QDT8-3026-SM-32PKB 30-39 years, female 154.8
GTEX-1A8G6-3126-SM-731D8 60-69 years, male 154.6
GTEX-1EH9U-3126-SM-7MXU5 60-69 years, male 154.4
GTEX-13JUV-3026-SM-5K7WX 40-49 years, female 153.7
GTEX-1H3VE-2826-SM-9WPOL 40-49 years, male 153.6
GTEX-1H1ZS-2926-SM-9WPP2 70-79 years, male 152.5
GTEX-1HB9E-3126-SM-AHZ4M 50-59 years, male 150.9
GTEX-QMR6-1326-SM-32PLB 50-59 years, male 150.2
GTEX-15SHU-3026-SM-6LPIB 40-49 years, female 149.8
GTEX-13OVJ-2726-SM-5IJG6 50-59 years, female 142.1
GTEX-RU72-2926-SM-2TF66 50-59 years, female 142.0
GTEX-P44H-2426-SM-2XCEJ 40-49 years, male 129.2
GTEX-14PJO-2926-SM-686ZI 60-69 years, male 117.7
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CEREBELLUM - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

278.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Cerebellum
Scaled Tags Per Million: 278.0
FF:10083-102B2 22-68 years, mixed 280.0
FF:10166-103B4 76 years, female 276.0

CEREBELLUM - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

120.5
Pig sample Sample description nTPM
Cerebellum
nTPM: 120.6
Samples: 4

Max nTPM: 177.7
Min nTPM: 96.0
Sample A Female 177.7
Sample B Female 112.0
Sample C Male 96.0
Sample D Male 96.5

CEREBELLUM - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

71.9
Mouse sample Sample description nTPM
Cerebellum
nTPM: 71.9
Samples: 4

Max nTPM: 75.6
Min nTPM: 68.3
Sample A Male 74.1
Sample B Male 68.3
Sample C Female 75.6
Sample D Female 69.6

CEREBELLUM - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

5.2
Allen experiment id Experiment description Expression energy
Cerebellum
Expression energy: 5.2
72001898 Antisense, RP_050915_02_E04, Mouse strain C57BL/6J (56 days, male) 5.2

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