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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:92.1 nTPM
HPA Brain:175.7 nTPM
GTEx:92.1 nTPM
FANTOM5:163.9 Scaled Tags Per Million
Pig:45.2 nTPM
Mouse:71.0 nTPM
Allen mouse:0.5 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA005716Antibody CAB013240
Glial cells MediumLow
Neuronal cells HighLow




BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

175.7
Sample id Sample description nTPM
Caudate nucleus
nTPM: 98.1
2481 Female, age 94, left hemisphere 146.5
2290 Female, age 72, unknown 110.6
1857 Female, age 85, left hemisphere 107.6
1781 Male, age 74, unknown 102.4
2289 Male, age 61, right hemisphere 86.0
2288 Male, age 75, left hemisphere 85.8
1854 Male, age 80, left hemisphere 84.4
2846 Female, age 79, unknown 61.3
Globus pallidus, externus
nTPM: 175.7
2646 Male, age 61, right hemisphere 272.0
1996 Male, age 80, right hemisphere 204.5
2567 Female, age 72, unknown 165.2
2772 Female, age 79, unknown 127.9
2395 Male, age 75, both hemispheres 108.7
Globus pallidus, internus
nTPM: 140.7
2483 Female, age 94, right hemisphere 195.1
2037 Male, age 80, right hemisphere 182.5
1818 Male, age 74, unknown 158.5
2287 Male, age 75, right hemisphere 128.6
2111 Female, age 85, right hemisphere 117.0
2566 Female, age 72, unknown 106.3
2778 Female, age 91, both hemispheres 97.0
Nucleus accumbens
nTPM: 79.8
1806 Female, age 85, left hemisphere 123.3
2286 Male, age 75, left hemisphere 105.5
2732 Male, age 80, right hemisphere 88.7
2698 Female, age 72, unknown 72.2
2824 Male, age 61, right hemisphere 68.6
2391 Female, age 94, left hemisphere 66.3
1783 Male, age 74, unknown 65.1
1856 Female, age 91, right hemisphere 48.9
Nucleus basalis of Meynert
nTPM: 117.1
2569 Male, age 61, both hemispheres 300.4
2484 Female, age 94, left hemisphere 70.1
2821 Male, age 75, both hemispheres 50.1
2393 Male, age 80, right hemisphere 47.6
Nucleus of the diagonal band
nTPM: 46.5
1979 Male, age 74, unknown 72.3
1812 Female, age 91, both hemispheres 47.8
2775 Male, age 80, right hemisphere 40.1
2195 Female, age 85, both hemispheres 39.6
2029 Male, age 61, right hemisphere 32.4
Putamen
nTPM: 71.6
2647 Male, age 75, left hemisphere 100.7
1829 Male, age 74, unknown 76.4
2482 Female, age 94, left hemisphere 74.9
2489 Female, age 72, unknown 74.6
2466 Female, age 79, unknown 65.8
1838 Male, age 80, right hemisphere 57.0
1937 Female, age 91, right hemisphere 52.1
Septal nuclei
nTPM: 55.4
2199 Male, age 80, right hemisphere 91.4
2394 Male, age 61, left hemisphere 81.0
2059 Female, age 85, both hemispheres 71.7
2009 Female, age 91, both hemispheres 41.7
1960 Male, age 74, unknown 35.9
2031 Female, age 72, unknown 33.7
2629 Female, age 94, right hemisphere 32.2
Stria terminalis, bed nucleus
nTPM: 48.7
2201 Male, age 74, unknown 63.8
2486 Female, age 94, both hemispheres 43.1
1974 Female, age 91, both hemispheres 39.2

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

92.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 92.1
Samples: 246

Max nTPM: 400.9
Min nTPM: 5.5
Std nTPM: 52.4
Median nTPM: 81.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 400.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 302.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 275.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 261.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 257.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 257.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 236.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 189.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 187.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 184.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 184.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 184.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 179.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 177.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 172.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 172.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 164.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 160.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 160.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 157.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 157.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 157.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 156.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 155.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 152.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 150.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 149.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 148.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 148.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 145.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 145.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 145.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 144.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 144.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 143.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 142.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 140.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 138.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 136.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 135.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 134.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 134.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 134.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 133.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 132.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 131.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 131.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 130.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 127.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 127.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 126.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 126.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 125.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 124.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 123.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 123.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 123.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 122.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 121.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 121.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 121.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 121.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 118.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 117.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 117.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 115.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 114.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 114.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 113.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 112.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 109.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 109.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 107.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 107.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 107.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 105.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 105.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 105.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 103.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 103.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 102.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 102.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 102.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 100.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 100.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 100.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 100.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 98.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 98.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 96.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 96.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 96.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 96.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 95.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 94.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 94.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 93.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 93.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 92.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 91.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 91.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 91.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 91.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 90.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 90.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 90.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 90.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 90.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 89.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 89.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 89.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 88.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 87.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 87.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 86.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 86.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 85.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 85.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 84.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 84.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 84.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 81.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 81.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 81.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 80.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 80.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 79.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 79.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 79.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 78.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 78.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 78.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 77.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 76.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 76.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 75.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 75.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 75.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 75.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 75.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 75.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 73.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 72.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 72.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 72.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 72.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 71.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 70.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 70.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 70.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 69.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 68.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 67.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 66.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 66.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 65.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 65.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 64.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 64.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 64.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 64.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 64.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 64.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 64.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 63.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 63.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 63.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 62.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 61.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 61.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 61.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 61.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 61.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 61.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 60.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 60.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 59.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 59.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 59.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 58.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 58.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 57.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 57.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 56.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 55.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 55.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 54.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 53.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 53.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 53.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 53.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 52.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 52.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 52.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 52.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 51.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 50.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 50.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 50.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 50.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 50.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 50.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 49.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 49.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 49.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 49.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 48.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 47.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 46.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 46.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 46.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 46.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 46.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 45.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 44.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 43.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 42.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 41.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 41.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 40.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 40.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 40.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 39.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 39.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 39.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 39.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 39.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 38.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 38.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 38.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 38.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 36.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 34.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 31.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 30.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 29.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 28.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 27.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 25.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 21.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 15.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 13.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 12.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 7.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 7.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 5.5
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 75.5
Samples: 246

Max nTPM: 393.2
Min nTPM: 10.5
Std nTPM: 53.9
Median nTPM: 59.0
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 393.2
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 341.2
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 330.1
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 272.7
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 231.0
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 218.4
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 207.1
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 200.0
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 199.5
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 192.1
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 191.1
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 189.1
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 186.6
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 173.8
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 171.2
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 168.3
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 165.7
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 159.0
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 158.5
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 158.0
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 151.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 149.3
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 146.9
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 146.2
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 143.1
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 141.5
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 140.4
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 135.4
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 135.2
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 134.3
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 133.1
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 130.1
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 128.6
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 125.6
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 123.9
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 123.6
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 117.3
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 117.2
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 113.4
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 111.3
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 109.9
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 108.2
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 106.6
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 105.8
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 104.3
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 103.0
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 102.6
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 102.4
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 101.6
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 101.0
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 99.4
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 95.8
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 95.6
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 95.2
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 94.5
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 94.4
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 90.4
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 90.2
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 89.8
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 86.7
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 86.5
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 86.2
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 85.5
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 83.8
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 82.7
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 82.1
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 82.0
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 80.3
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 80.2
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 79.5
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 79.2
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 79.1
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 79.0
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 78.9
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 78.2
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 77.6
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 77.3
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 77.2
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 77.1
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 76.7
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 76.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 76.5
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 76.5
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 73.8
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 72.5
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 72.2
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 71.4
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 71.3
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 70.6
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 70.5
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 69.8
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 68.9
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 68.7
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 68.3
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 67.5
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 66.9
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 66.5
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 66.5
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 66.1
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 65.5
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 65.4
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 65.1
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 65.1
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 65.0
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 64.4
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 64.2
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 64.1
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 63.9
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 63.7
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 63.3
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 63.2
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 63.0
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 62.8
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 62.5
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 62.2
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 61.6
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 60.4
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 60.2
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 60.0
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 59.8
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 59.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 59.5
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 59.2
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 58.8
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 58.6
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 58.6
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 58.5
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 58.4
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 58.3
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 58.1
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 57.9
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 57.9
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 57.6
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 57.3
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 56.8
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 56.8
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 56.8
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 56.7
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 56.6
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 56.6
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 56.5
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 56.4
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 56.0
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 55.9
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 55.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 55.0
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 54.5
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 54.2
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 53.0
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 52.9
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 52.5
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 52.3
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 52.0
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 51.8
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 51.4
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 51.2
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 50.7
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 50.6
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 50.5
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 50.5
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 50.3
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 50.1
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 50.0
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 49.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 49.7
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 49.2
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 49.1
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 48.8
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 47.4
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 47.4
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 46.8
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 46.7
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 46.3
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 46.1
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 45.9
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 45.5
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 45.3
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 45.0
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 44.2
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 44.1
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 43.3
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 43.1
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 42.5
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 42.5
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 42.4
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 42.3
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 42.3
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 42.2
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 42.2
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 41.1
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 41.0
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 40.9
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 40.1
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 39.9
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 39.7
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 39.7
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 39.4
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 38.8
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 38.6
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 38.5
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 38.5
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 37.6
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 37.5
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 37.3
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 37.3
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 37.0
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 36.9
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 36.6
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 35.9
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 35.8
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 35.7
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 35.5
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 35.5
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 35.4
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 35.1
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 34.9
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 34.5
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 33.8
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 33.6
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 32.9
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 32.3
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 31.9
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 31.3
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 31.3
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 30.8
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 29.8
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 29.4
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 29.0
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 28.8
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 27.5
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 26.8
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 25.3
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 25.0
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 24.8
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 24.4
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 24.3
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 23.7
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 23.5
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 22.8
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 22.5
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 22.5
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 21.5
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 19.6
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 19.2
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 11.1
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 10.5
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Brain - Putamen (basal ganglia)
Average nTPM: 85.2
Samples: 205

Max nTPM: 298.8
Min nTPM: 6.1
Std nTPM: 54.8
Median nTPM: 70.4
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 298.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 263.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 256.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 246.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 243.4
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 232.2
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 227.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 225.2
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 216.0
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 203.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 200.0
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 191.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 186.6
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 182.6
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 175.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 174.8
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 167.6
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 162.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 161.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 161.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 160.1
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 157.5
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 156.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 155.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 150.2
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 149.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 147.5
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 147.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 142.0
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 141.5
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 138.7
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 138.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 136.2
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 131.6
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 131.0
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 128.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 125.6
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 124.6
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 123.9
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 122.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 121.9
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 121.7
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 121.5
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 119.9
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 118.6
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 118.0
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 117.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 114.5
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 114.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 113.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 113.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 112.9
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 110.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 108.4
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 108.3
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 108.3
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 104.6
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 104.2
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 103.0
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 102.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 100.7
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 99.2
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 99.1
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 98.7
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 98.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 98.2
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 98.0
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 97.6
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 96.7
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 96.3
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 95.8
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 94.9
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 94.7
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 93.7
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 93.2
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 92.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 91.4
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 91.1
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 90.8
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 90.5
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 89.5
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 88.1
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 86.1
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 85.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 85.1
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 85.0
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 83.4
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 83.2
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 82.1
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 81.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 79.4
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 78.5
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 77.3
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 75.4
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 74.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 74.1
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 72.9
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 72.0
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 71.7
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 70.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 70.5
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 70.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 70.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 69.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 69.5
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 69.1
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 68.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 68.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 68.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 67.5
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 66.7
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 66.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 65.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 64.1
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 63.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 63.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 63.0
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 62.2
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 61.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 61.8
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 60.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 60.1
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 59.7
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 59.7
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 59.6
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 58.9
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 58.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 58.7
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 58.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 57.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 56.5
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 56.4
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 56.1
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 55.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 54.8
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 54.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 54.7
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 54.0
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 53.5
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 53.1
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 52.6
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 52.1
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 51.9
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 51.4
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 51.0
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 50.5
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 50.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 49.3
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 49.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 48.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 47.6
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 46.8
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 45.7
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 45.5
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 45.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 45.1
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 44.5
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 43.8
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 43.8
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 43.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 42.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 41.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 41.3
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 40.9
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 40.7
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 40.3
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 40.3
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 38.9
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 38.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 38.2
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 38.0
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 37.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 37.8
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 37.6
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 36.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 36.2
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 35.8
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 34.5
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 32.2
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 31.8
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 31.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 31.0
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 30.5
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 29.9
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 29.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 28.7
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 28.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 28.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 27.6
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 27.5
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 24.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 23.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 22.7
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 22.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 20.2
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 18.6
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 17.2
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 17.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 14.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 14.5
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 13.6
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 13.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 8.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 7.2
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 6.1
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

163.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 140.2
FF:10164-103B2 76 years, female 140.2
Nucleus accumbens
Scaled Tags Per Million: 102.5
FF:10037-101F1 23-56 years, mixed 102.5
Putamen
Scaled Tags Per Million: 155.9
FF:10176-103C5 60 years, female 155.9
Globus pallidus
Scaled Tags Per Million: 163.9
FF:10175-103C4 60 years, female 232.2
FF:10161-103A8 76 years, female 95.6

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

45.2
Pig sample Sample description nTPM
Caudate
nTPM: 36.1
Samples: 4

Max nTPM: 47.7
Min nTPM: 24.4
Sample A Female 24.4
Sample B Female 34.9
Sample C Male 47.7
Sample D Male 37.5
Putamen
nTPM: 45.2
Samples: 4

Max nTPM: 52.9
Min nTPM: 39.8
Sample A Female 52.9
Sample B Female 39.8
Sample C Male 47.6
Sample D Male 40.5
Septum
nTPM: 37.0
Samples: 4

Max nTPM: 51.1
Min nTPM: 23.3
Sample A Female 23.3
Sample B Female 36.0
Sample C Male 37.7
Sample D Male 51.1
Ventral pallidum
nTPM: 39.0
Samples: 4

Max nTPM: 61.0
Min nTPM: 17.6
Sample A Female 17.6
Sample B Female 45.9
Sample C Male 61.0
Sample D Male 31.5

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

71.0
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 56.6
Samples: 4

Max nTPM: 64.2
Min nTPM: 49.1
Sample A Male 49.1
Sample B Male 51.4
Sample C Female 64.2
Sample D Female 61.8
Septum
nTPM: 71.0
Samples: 4

Max nTPM: 85.7
Min nTPM: 51.4
Sample A Male 51.4
Sample B Male 70.3
Sample C Female 85.7
Sample D Female 76.6
Ventral forebrain
nTPM: 50.1
Samples: 4

Max nTPM: 64.0
Min nTPM: 39.9
Sample A Male 39.9
Sample B Male 45.6
Sample C Female 64.0
Sample D Female 50.7

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.5
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.4
633291 Antisense, RP_040907_02_E08, Mouse strain C57BL/6J (56 days, male) 0.4
Pallidum
Expression energy: 0.5
633291 Antisense, RP_040907_02_E08, Mouse strain C57BL/6J (56 days, male) 0.5

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