HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:12.4 nTPM
HPA Brain:16.7 nTPM
GTEx:12.4 nTPM
FANTOM5:25.2 Scaled Tags Per Million
Pig:5.5 nTPM
Mouse:17.8 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA049900
Glial cells Not detected
Neuronal cells Low


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 16.7
Sample id Sample description nTPM
Hippocampus
nTPM: 14.6
2621 Female, age 67, right hemisphere 17.3
1855 Male, age 76, left hemisphere 16.2
2529 Female, age 94, left hemisphere 15.0
1911 Female, age 85, right hemisphere 14.4
1898 Male, age 80, left hemisphere 14.3
2148 Female, age 91, left hemisphere 10.3
Dentate gyrus
nTPM: 12.2
2246 Female, age 85, both hemispheres 15.0
1927 Female, age 91, both hemispheres 13.9
2530 Female, age 94, left hemisphere 13.9
2010 Male, age 76, both hemispheres 12.4
2528 Male, age 74, both hemispheres 10.5
2531 Female, age 67, both hemispheres 7.3
Entorhinal gyrus
nTPM: 14.8
2613 Female, age 94, left hemisphere 20.4
1787 Male, age 76, left hemisphere 16.1
1938 Female, age 85, left hemisphere 14.3
2686 Male, age 75, right hemisphere 13.9
2764 Male, age 80, right hemisphere 13.3
2117 Female, age 91, right hemisphere 10.7
Hippocampus, CA1
nTPM: 14.0
2527 Male, age 74, both hemispheres 17.4
2082 Female, age 91, right hemisphere 16.0
2749 Male, age 80, left hemisphere 15.9
1873 Female, age 85, both hemispheres 13.8
2045 Male, age 76, both hemispheres 7.0
Hippocampus, CA2
nTPM: 16.7
2437 Female, age 94, left hemisphere 21.6
1892 Male, age 76, both hemispheres 21.5
2113 Female, age 91, right hemisphere 15.5
1940 Female, age 85, left hemisphere 14.7
2249 Male, age 74, both hemispheres 13.7
1963 Male, age 80, left hemisphere 13.5
Hippocampus, CA3
nTPM: 13.7
1867 Male, age 76, both hemispheres 18.2
2137 Male, age 80, left hemisphere 18.2
2861 Female, age 67, both hemispheres 13.1
1891 Female, age 85, both hemispheres 13.0
2436 Male, age 74, both hemispheres 13.0
2620 Female, age 94, left hemisphere 6.6
Parahippocampal cortex
nTPM: 15.9
2245 Female, age 91, both hemispheres 20.7
2622 Female, age 67, right hemisphere 20.5
2250 Female, age 67, right hemisphere 16.8
2692 Male, age 74, both hemispheres 15.6
1990 Female, age 91, right hemisphere 14.9
1850 Male, age 80, both hemispheres 14.8
2018 Male, age 76, both hemispheres 14.6
2532 Female, age 72, left hemisphere 14.1
2693 Female, age 94, both hemispheres 13.9
1933 Female, age 85, both hemispheres 13.0
Perirhinal gyrus
nTPM: 13.3
1847 Female, age 91, left hemisphere 16.6
1794 Male, age 80, right hemisphere 14.7
2848 Male, age 76, right hemisphere 14.2
1841 Female, age 85, right hemisphere 11.6
2521 Female, age 94, right hemisphere 9.6
Subiculum
nTPM: 15.4
2438 Female, age 94, left hemisphere 23.4
2619 Male, age 74, both hemispheres 21.4
1901 Male, age 80, both hemispheres 16.1
2042 Male, age 76, both hemispheres 12.7
1977 Female, age 85, both hemispheres 11.8
2729 Female, age 91, right hemisphere 7.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 12.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.4
Samples: 197

Max nTPM: 30.5
Min nTPM: 2.4
Std nTPM: 5.0
Median nTPM: 12.0
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 30.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 24.7
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 24.7
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 23.5
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 22.6
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 22.6
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 22.4
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 22.3
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 22.1
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 22.0
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 21.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 25.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 25.2
FF:10169-103B7 60 years, female 33.2
FF:10153-102I9 76 years, female 17.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 5.5
Pig sample Sample description nTPM
Subiculum
nTPM: 4.5
Samples: 4

Max nTPM: 5.2
Min nTPM: 2.9
Sample A Female 5.2
Sample B Female 4.9
Sample C Male 5.0
Sample D Male 2.9
Dorsal hippocampus
nTPM: 3.0
Samples: 4

Max nTPM: 4.3
Min nTPM: 1.7
Sample A Female 4.3
Sample B Female 3.2
Sample C Male 2.7
Sample D Male 1.7
Entorhinal cortex
nTPM: 3.0
Samples: 4

Max nTPM: 3.8
Min nTPM: 2.2
Sample A Female 3.5
Sample B Female 2.3
Sample C Male 3.8
Sample D Male 2.2
Ventral hippocampus
nTPM: 5.6
Samples: 4

Max nTPM: 9.6
Min nTPM: 3.0
Sample A Female 6.4
Sample B Female 3.2
Sample C Male 9.6
Sample D Male 3.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 17.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 17.8
Samples: 4

Max nTPM: 20.7
Min nTPM: 15.6
Sample A Male 16.4
Sample B Male 15.6
Sample C Female 18.5
Sample D Female 20.7
Hippocampal formation
nTPM: 12.1
Samples: 4

Max nTPM: 13.2
Min nTPM: 10.1
Sample A Male 12.5
Sample B Male 12.6
Sample C Female 10.1
Sample D Female 13.2

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