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EDN3
HPA
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  • EDN3
PROTEIN SUMMARY GENE INFORMATION RNA DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

EDN3
Synonyms ET3
Gene descriptioni

Full gene name according to HGNC.

Endothelin 3
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Human disease related genes
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Secreted, Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 20
Cytoband q13.32
Chromosome location (bp) 59300443 - 59325992
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

7
Ensembl ENSG00000124205 (version 109)
Entrez gene 1908
HGNC HGNC:3178
UniProt P14138 (UniProt - Evidence at protein level)
neXtProt NX_P14138
GeneCards EDN3
Antibodypedia EDN3 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Endothelins are endothelium-derived vasoconstrictor peptides.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Vasoactive, Vasoconstrictor
Gene summary (Entrez)i

Useful information about the gene from Entrez

The protein encoded by this gene is a member of the endothelin family. Endothelins are endothelium-derived vasoactive peptides involved in a variety of biological functions. The active form of this protein is a 21 amino acid peptide processed from the precursor protein. The active peptide is a ligand for endothelin receptor type B (EDNRB). The interaction of this endothelin with EDNRB is essential for development of neural crest-derived cell lineages, such as melanocytes and enteric neurons. Mutations in this gene and EDNRB have been associated with Hirschsprung disease (HSCR) and Waardenburg syndrome (WS), which are congenital disorders involving neural crest-derived cells. Altered expression of this gene is implicated in tumorigenesis. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Oct 2014]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
EDN3-201
ENSP00000311854
ENST00000311585
P14138
[Direct mapping] Endothelin-3
Show all
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
   DeepSig predicted secreted proteins
Disease related genes
Human disease related genes
   Congenital disorders of metabolism
   Other congenital disorders of metabolism
   Congenital malformations
   Congenital malformations of the digestive system
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0002690 [positive regulation of leukocyte chemotaxis]
GO:0003100 [regulation of systemic arterial blood pressure by endothelin]
GO:0005102 [signaling receptor binding]
GO:0005179 [hormone activity]
GO:0005576 [extracellular region]
GO:0005615 [extracellular space]
GO:0006874 [cellular calcium ion homeostasis]
GO:0007165 [signal transduction]
GO:0007166 [cell surface receptor signaling pathway]
GO:0007267 [cell-cell signaling]
GO:0008015 [blood circulation]
GO:0008284 [positive regulation of cell population proliferation]
GO:0010460 [positive regulation of heart rate]
GO:0010468 [regulation of gene expression]
GO:0014826 [vein smooth muscle contraction]
GO:0019229 [regulation of vasoconstriction]
GO:0030072 [peptide hormone secretion]
GO:0030593 [neutrophil chemotaxis]
GO:0031708 [endothelin B receptor binding]
GO:0042310 [vasoconstriction]
GO:0043406 [positive regulation of MAP kinase activity]
GO:0045597 [positive regulation of cell differentiation]
GO:0045840 [positive regulation of mitotic nuclear division]
GO:0046887 [positive regulation of hormone secretion]
GO:0048016 [inositol phosphate-mediated signaling]
GO:0060585 [positive regulation of prostaglandin-endoperoxide synthase activity]
GO:0065008 [regulation of biological quality]
GO:0097746 [blood vessel diameter maintenance]
Show all
219 aa
23.6 kDa
Yes 0
EDN3-202
ENSP00000337128
ENST00000337938
P14138
[Direct mapping] Endothelin-3
Show all
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
   DeepSig predicted secreted proteins
Disease related genes
Human disease related genes
   Congenital disorders of metabolism
   Other congenital disorders of metabolism
   Congenital malformations
   Congenital malformations of the digestive system
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0001755 [neural crest cell migration]
GO:0002690 [positive regulation of leukocyte chemotaxis]
GO:0003100 [regulation of systemic arterial blood pressure by endothelin]
GO:0005102 [signaling receptor binding]
GO:0005179 [hormone activity]
GO:0005576 [extracellular region]
GO:0005615 [extracellular space]
GO:0006874 [cellular calcium ion homeostasis]
GO:0007165 [signal transduction]
GO:0007166 [cell surface receptor signaling pathway]
GO:0007267 [cell-cell signaling]
GO:0007411 [axon guidance]
GO:0008015 [blood circulation]
GO:0008283 [cell population proliferation]
GO:0008284 [positive regulation of cell population proliferation]
GO:0010460 [positive regulation of heart rate]
GO:0010468 [regulation of gene expression]
GO:0010961 [cellular magnesium ion homeostasis]
GO:0014826 [vein smooth muscle contraction]
GO:0019229 [regulation of vasoconstriction]
GO:0030072 [peptide hormone secretion]
GO:0030182 [neuron differentiation]
GO:0030318 [melanocyte differentiation]
GO:0030334 [regulation of cell migration]
GO:0030593 [neutrophil chemotaxis]
GO:0031175 [neuron projection development]
GO:0031708 [endothelin B receptor binding]
GO:0042310 [vasoconstriction]
GO:0043406 [positive regulation of MAP kinase activity]
GO:0045597 [positive regulation of cell differentiation]
GO:0045840 [positive regulation of mitotic nuclear division]
GO:0046887 [positive regulation of hormone secretion]
GO:0048016 [inositol phosphate-mediated signaling]
GO:0048070 [regulation of developmental pigmentation]
GO:0048675 [axon extension]
GO:0051649 [establishment of localization in cell]
GO:0060585 [positive regulation of prostaglandin-endoperoxide synthase activity]
GO:0065008 [regulation of biological quality]
GO:0071805 [potassium ion transmembrane transport]
GO:0097746 [blood vessel diameter maintenance]
GO:1901381 [positive regulation of potassium ion transmembrane transport]
Show all
238 aa
25.5 kDa
Yes 0
EDN3-203
ENSP00000360064
ENST00000371025
Q4FAT2
[Direct mapping] Endothelin-3
Show all
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
   DeepSig predicted secreted proteins
Human disease related genes
   Congenital disorders of metabolism
   Other congenital disorders of metabolism
   Congenital malformations
   Congenital malformations of the digestive system
Show all
GO:0005576 [extracellular region]
GO:0019229 [regulation of vasoconstriction]
GO:0042310 [vasoconstriction]
GO:0065008 [regulation of biological quality]
GO:0097746 [blood vessel diameter maintenance]
Show all
192 aa
20.6 kDa
Yes 0
EDN3-204
ENSP00000360067
ENST00000371028
P14138
[Direct mapping] Endothelin-3
Show all
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
   DeepSig predicted secreted proteins
Disease related genes
Human disease related genes
   Congenital disorders of metabolism
   Other congenital disorders of metabolism
   Congenital malformations
   Congenital malformations of the digestive system
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0002690 [positive regulation of leukocyte chemotaxis]
GO:0003100 [regulation of systemic arterial blood pressure by endothelin]
GO:0005102 [signaling receptor binding]
GO:0005179 [hormone activity]
GO:0005576 [extracellular region]
GO:0005615 [extracellular space]
GO:0006874 [cellular calcium ion homeostasis]
GO:0007165 [signal transduction]
GO:0007166 [cell surface receptor signaling pathway]
GO:0007267 [cell-cell signaling]
GO:0008015 [blood circulation]
GO:0008284 [positive regulation of cell population proliferation]
GO:0010460 [positive regulation of heart rate]
GO:0010468 [regulation of gene expression]
GO:0014826 [vein smooth muscle contraction]
GO:0019229 [regulation of vasoconstriction]
GO:0030072 [peptide hormone secretion]
GO:0030593 [neutrophil chemotaxis]
GO:0031708 [endothelin B receptor binding]
GO:0042310 [vasoconstriction]
GO:0043406 [positive regulation of MAP kinase activity]
GO:0045597 [positive regulation of cell differentiation]
GO:0045840 [positive regulation of mitotic nuclear division]
GO:0046887 [positive regulation of hormone secretion]
GO:0048016 [inositol phosphate-mediated signaling]
GO:0060585 [positive regulation of prostaglandin-endoperoxide synthase activity]
GO:0065008 [regulation of biological quality]
GO:0097746 [blood vessel diameter maintenance]
Show all
238 aa
25.5 kDa
Yes 0
EDN3-205
ENSP00000379015
ENST00000395654
P14138
[Direct mapping] Endothelin-3
Show all
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
   DeepSig predicted secreted proteins
Disease related genes
Human disease related genes
   Congenital disorders of metabolism
   Other congenital disorders of metabolism
   Congenital malformations
   Congenital malformations of the digestive system
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0002690 [positive regulation of leukocyte chemotaxis]
GO:0003100 [regulation of systemic arterial blood pressure by endothelin]
GO:0005102 [signaling receptor binding]
GO:0005179 [hormone activity]
GO:0005576 [extracellular region]
GO:0005615 [extracellular space]
GO:0006874 [cellular calcium ion homeostasis]
GO:0007165 [signal transduction]
GO:0007166 [cell surface receptor signaling pathway]
GO:0007267 [cell-cell signaling]
GO:0008015 [blood circulation]
GO:0008284 [positive regulation of cell population proliferation]
GO:0010460 [positive regulation of heart rate]
GO:0010468 [regulation of gene expression]
GO:0014826 [vein smooth muscle contraction]
GO:0019229 [regulation of vasoconstriction]
GO:0030072 [peptide hormone secretion]
GO:0030593 [neutrophil chemotaxis]
GO:0031708 [endothelin B receptor binding]
GO:0042310 [vasoconstriction]
GO:0043406 [positive regulation of MAP kinase activity]
GO:0045597 [positive regulation of cell differentiation]
GO:0045840 [positive regulation of mitotic nuclear division]
GO:0046887 [positive regulation of hormone secretion]
GO:0048016 [inositol phosphate-mediated signaling]
GO:0060585 [positive regulation of prostaglandin-endoperoxide synthase activity]
GO:0065008 [regulation of biological quality]
GO:0097746 [blood vessel diameter maintenance]
Show all
224 aa
23.9 kDa
Yes 0
EDN3-206
ENSP00000493472
ENST00000644821
A0A2R8Y214
[Direct mapping] Endothelin-3
Show all
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
   DeepSig predicted secreted proteins
Human disease related genes
   Congenital disorders of metabolism
   Other congenital disorders of metabolism
   Congenital malformations
   Congenital malformations of the digestive system
Show all
GO:0005576 [extracellular region]
GO:0019229 [regulation of vasoconstriction]
GO:0042310 [vasoconstriction]
GO:0065008 [regulation of biological quality]
GO:0097746 [blood vessel diameter maintenance]
Show all
198 aa
21.2 kDa
Yes 0
EDN3-208
ENSP00000500655
ENST00000672969
A0A5F9ZHX0
[Direct mapping] Endothelin-3
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital disorders of metabolism
   Other congenital disorders of metabolism
   Congenital malformations
   Congenital malformations of the digestive system
Show all
GO:0005576 [extracellular region]
GO:0019229 [regulation of vasoconstriction]
GO:0042310 [vasoconstriction]
GO:0065008 [regulation of biological quality]
GO:0097746 [blood vessel diameter maintenance]
Show all
154 aa
16.8 kDa
No 0

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