HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:18.5 nTPM
HPA Brain:66.0 nTPM
GTEx:18.5 nTPM
FANTOM5:15.7 Scaled Tags Per Million
Pig:37.5 nTPM
Mouse:15.6 nTPM
Allen mouse:1.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 66.0
Sample id Sample description nTPM
Hippocampus
nTPM: 49.7
2621 Female, age 67, right hemisphere 61.2
2148 Female, age 91, left hemisphere 58.6
1855 Male, age 76, left hemisphere 52.4
2529 Female, age 94, left hemisphere 45.6
1911 Female, age 85, right hemisphere 45.2
1898 Male, age 80, left hemisphere 35.1
Dentate gyrus
nTPM: 52.9
1927 Female, age 91, both hemispheres 63.8
2010 Male, age 76, both hemispheres 61.6
2246 Female, age 85, both hemispheres 54.0
2531 Female, age 67, both hemispheres 50.7
2530 Female, age 94, left hemisphere 47.1
2528 Male, age 74, both hemispheres 40.0
Entorhinal gyrus
nTPM: 53.2
2613 Female, age 94, left hemisphere 69.2
1938 Female, age 85, left hemisphere 60.4
1787 Male, age 76, left hemisphere 59.5
2686 Male, age 75, right hemisphere 46.3
2764 Male, age 80, right hemisphere 43.9
2117 Female, age 91, right hemisphere 40.0
Hippocampus, CA1
nTPM: 66.0
2045 Male, age 76, both hemispheres 111.2
2749 Male, age 80, left hemisphere 80.9
2082 Female, age 91, right hemisphere 56.0
2527 Male, age 74, both hemispheres 47.6
1873 Female, age 85, both hemispheres 34.3
Hippocampus, CA2
nTPM: 42.9
1940 Female, age 85, left hemisphere 52.4
1963 Male, age 80, left hemisphere 47.1
2113 Female, age 91, right hemisphere 44.7
2249 Male, age 74, both hemispheres 40.0
1892 Male, age 76, both hemispheres 37.1
2437 Female, age 94, left hemisphere 36.3
Hippocampus, CA3
nTPM: 49.7
2861 Female, age 67, both hemispheres 61.0
2137 Male, age 80, left hemisphere 58.7
1867 Male, age 76, both hemispheres 55.0
2620 Female, age 94, left hemisphere 53.2
1891 Female, age 85, both hemispheres 35.4
2436 Male, age 74, both hemispheres 35.4
Parahippocampal cortex
nTPM: 44.3
2018 Male, age 76, both hemispheres 53.9
2245 Female, age 91, both hemispheres 49.7
1933 Female, age 85, both hemispheres 48.8
2532 Female, age 72, left hemisphere 48.6
1850 Male, age 80, both hemispheres 45.3
1990 Female, age 91, right hemisphere 43.3
2622 Female, age 67, right hemisphere 41.4
2250 Female, age 67, right hemisphere 40.5
2692 Male, age 74, both hemispheres 39.3
2693 Female, age 94, both hemispheres 32.4
Perirhinal gyrus
nTPM: 43.7
1847 Female, age 91, left hemisphere 57.8
2521 Female, age 94, right hemisphere 55.4
1794 Male, age 80, right hemisphere 42.1
1841 Female, age 85, right hemisphere 32.2
2848 Male, age 76, right hemisphere 31.1
Subiculum
nTPM: 47.7
2042 Male, age 76, both hemispheres 69.3
1901 Male, age 80, both hemispheres 52.5
2438 Female, age 94, left hemisphere 47.7
1977 Female, age 85, both hemispheres 46.6
2619 Male, age 74, both hemispheres 37.9
2729 Female, age 91, right hemisphere 32.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 18.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 18.5
Samples: 197

Max nTPM: 40.1
Min nTPM: 7.9
Std nTPM: 5.5
Median nTPM: 17.1
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 40.1
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 38.4
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 35.5
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 34.4
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 32.0
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 31.1
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 29.7
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 29.5
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 29.4
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 29.4
GTEX-13X6I-0011-R1b-SM-5PNZC 60-69 years, male 28.3
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 15.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 15.7
FF:10153-102I9 76 years, female 17.9
FF:10169-103B7 60 years, female 13.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 37.5
Pig sample Sample description nTPM
Subiculum
nTPM: 24.8
Samples: 4

Max nTPM: 28.1
Min nTPM: 20.7
Sample A Female 28.1
Sample B Female 20.7
Sample C Male 25.1
Sample D Male 25.2
Dorsal hippocampus
nTPM: 16.9
Samples: 4

Max nTPM: 23.9
Min nTPM: 11.8
Sample A Female 15.4
Sample B Female 16.5
Sample C Male 23.9
Sample D Male 11.8
Entorhinal cortex
nTPM: 37.5
Samples: 4

Max nTPM: 44.8
Min nTPM: 27.8
Sample A Female 42.3
Sample B Female 27.8
Sample C Male 44.8
Sample D Male 35.2
Ventral hippocampus
nTPM: 17.4
Samples: 4

Max nTPM: 23.2
Min nTPM: 11.3
Sample A Female 11.3
Sample B Female 15.0
Sample C Male 23.2
Sample D Male 20.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 15.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 15.6
Samples: 4

Max nTPM: 17.1
Min nTPM: 13.1
Sample A Male 15.7
Sample B Male 17.1
Sample C Female 13.1
Sample D Female 16.5
Hippocampal formation
nTPM: 12.3
Samples: 4

Max nTPM: 13.7
Min nTPM: 11.4
Sample A Male 12.2
Sample B Male 11.4
Sample C Female 13.7
Sample D Female 12.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.3
74635331 Antisense, RP_060215_03_F10, Mouse strain C57BL/6J (56 days, male) 1.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org