HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:10.5 nTPM
HPA Brain:54.9 nTPM
GTEx:10.5 nTPM
FANTOM5:42.4 Scaled Tags Per Million
Pig:67.0 nTPM
Mouse:77.4 nTPM
Allen mouse:5.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB011618Antibody CAB070164
Glial cells Not detectedNot detected
Neuronal cells HighLow




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 54.9
Sample id Sample description nTPM
Hippocampus
nTPM: 47.4
1898 Male, age 80, left hemisphere 60.8
1855 Male, age 76, left hemisphere 45.9
2529 Female, age 94, left hemisphere 45.9
1911 Female, age 85, right hemisphere 44.6
2621 Female, age 67, right hemisphere 43.9
2148 Female, age 91, left hemisphere 43.0
Dentate gyrus
nTPM: 46.5
2010 Male, age 76, both hemispheres 55.8
1927 Female, age 91, both hemispheres 50.8
2528 Male, age 74, both hemispheres 48.0
2246 Female, age 85, both hemispheres 45.2
2530 Female, age 94, left hemisphere 40.0
2531 Female, age 67, both hemispheres 39.1
Entorhinal gyrus
nTPM: 44.2
1938 Female, age 85, left hemisphere 50.6
2117 Female, age 91, right hemisphere 49.6
2764 Male, age 80, right hemisphere 47.3
1787 Male, age 76, left hemisphere 43.5
2686 Male, age 75, right hemisphere 37.7
2613 Female, age 94, left hemisphere 36.3
Hippocampus, CA1
nTPM: 54.9
2749 Male, age 80, left hemisphere 82.8
1873 Female, age 85, both hemispheres 54.5
2045 Male, age 76, both hemispheres 47.5
2527 Male, age 74, both hemispheres 47.4
2082 Female, age 91, right hemisphere 42.4
Hippocampus, CA2
nTPM: 48.6
1963 Male, age 80, left hemisphere 60.8
1892 Male, age 76, both hemispheres 58.4
2249 Male, age 74, both hemispheres 47.1
2113 Female, age 91, right hemisphere 44.4
1940 Female, age 85, left hemisphere 41.3
2437 Female, age 94, left hemisphere 39.8
Hippocampus, CA3
nTPM: 49.7
2137 Male, age 80, left hemisphere 70.2
1867 Male, age 76, both hemispheres 57.5
1891 Female, age 85, both hemispheres 49.2
2436 Male, age 74, both hemispheres 47.3
2620 Female, age 94, left hemisphere 37.6
2861 Female, age 67, both hemispheres 36.6
Parahippocampal cortex
nTPM: 45.1
1850 Male, age 80, both hemispheres 58.8
1933 Female, age 85, both hemispheres 48.8
1990 Female, age 91, right hemisphere 48.7
2018 Male, age 76, both hemispheres 44.9
2245 Female, age 91, both hemispheres 44.6
2250 Female, age 67, right hemisphere 44.2
2532 Female, age 72, left hemisphere 42.7
2693 Female, age 94, both hemispheres 42.4
2692 Male, age 74, both hemispheres 41.3
2622 Female, age 67, right hemisphere 34.2
Perirhinal gyrus
nTPM: 51.4
1847 Female, age 91, left hemisphere 55.6
1794 Male, age 80, right hemisphere 55.4
1841 Female, age 85, right hemisphere 51.5
2521 Female, age 94, right hemisphere 49.9
2848 Male, age 76, right hemisphere 44.6
Subiculum
nTPM: 47.9
1901 Male, age 80, both hemispheres 54.3
1977 Female, age 85, both hemispheres 50.4
2438 Female, age 94, left hemisphere 48.8
2042 Male, age 76, both hemispheres 47.5
2729 Female, age 91, right hemisphere 43.8
2619 Male, age 74, both hemispheres 42.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 10.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.5
Samples: 197

Max nTPM: 15.7
Min nTPM: 7.5
Std nTPM: 1.4
Median nTPM: 10.4
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 15.7
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 15.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 15.3
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 14.0
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 13.7
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 13.5
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 13.5
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 13.4
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 13.4
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 13.4
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 13.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 42.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 42.4
FF:10169-103B7 60 years, female 46.7
FF:10153-102I9 76 years, female 38.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 67.0
Pig sample Sample description nTPM
Subiculum
nTPM: 61.5
Samples: 4

Max nTPM: 78.8
Min nTPM: 49.1
Sample A Female 78.8
Sample B Female 67.6
Sample C Male 50.4
Sample D Male 49.1
Dorsal hippocampus
nTPM: 67.0
Samples: 4

Max nTPM: 86.6
Min nTPM: 48.9
Sample A Female 86.6
Sample B Female 75.1
Sample C Male 57.5
Sample D Male 48.9
Entorhinal cortex
nTPM: 58.9
Samples: 4

Max nTPM: 72.7
Min nTPM: 43.8
Sample A Female 72.7
Sample B Female 70.9
Sample C Male 48.0
Sample D Male 43.8
Ventral hippocampus
nTPM: 60.9
Samples: 4

Max nTPM: 79.5
Min nTPM: 50.2
Sample A Female 79.5
Sample B Female 61.7
Sample C Male 50.2
Sample D Male 52.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 77.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 77.4
Samples: 4

Max nTPM: 101.7
Min nTPM: 66.6
Sample A Male 71.6
Sample B Male 66.6
Sample C Female 69.7
Sample D Female 101.7
Hippocampal formation
nTPM: 68.1
Samples: 4

Max nTPM: 87.4
Min nTPM: 53.2
Sample A Male 56.9
Sample B Male 75.0
Sample C Female 87.4
Sample D Female 53.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 5.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.1
70194678 Antisense, RP_050517_01_H07, Mouse strain C57BL/6J (56 days, male) 5.1

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