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BRAIN CEREBELLUM Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Cerebellum
CEREBELLUM - Expression summary
Protein expression
Cerebellumi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Bergmann glia - cytoplasm/membrane: Not detected
Bergmann glia - nucleus: Not detected
GLUC cells - cytoplasm/membrane: Not detected
GLUC cells - nucleus: Not detected
Granular cells - cytoplasm/membrane: Not detected
Granular cells - nucleus: Low
Molecular layer - neuropil: Not detected
Molecular layer cells - cytoplasm/membrane: Not detected
Molecular layer cells - nucleus: Not detected
Processes in granular layer: Not detected
Processes in molecular layer: Medium
Processes in white matter: Not detected
Purkinje cells - cytoplasm/membrane: High
Purkinje cells - dendrites: Medium
Purkinje cells - nucleus: Not detected
Synaptic glomeruli - capsule: Not detected
Synaptic glomeruli - core: Not detected
White matter cells - cytoplasm/membrane: Not detected
White matter cells - nucleus: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:276.8 nTPM
HPA Brain:171.5 nTPM
GTEx:276.8 nTPM
FANTOM5:428.9 Scaled Tags Per Million
Pig:178.6 nTPM
Mouse:79.1 nTPM
Allen mouse:29.5 Expression energy

CEREBELLUM - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody CAB022096
Bergmann glia - cytoplasm/membrane Not detected
Bergmann glia - nucleus Not detected
GLUC cells - cytoplasm/membrane Not detected
GLUC cells - nucleus Not detected
Purkinje cells - cytoplasm/membrane High
Purkinje cells - dendrites Medium
Purkinje cells - nucleus Not detected
Granular cells - cytoplasm/membrane Not detected
Granular cells - nucleus Low
Molecular layer - neuropil Not detected
Molecular layer cells - cytoplasm/membrane Not detected
Molecular layer cells - nucleus Not detected
Processes in granular layer Not detected
Processes in molecular layer Medium
Processes in white matter Not detected
Synaptic glomeruli - capsule Not detected
Synaptic glomeruli - core Not detected
White matter cells - cytoplasm/membrane Not detected
White matter cells - nucleus Not detected



CEREBELLUM - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

171.5
Sample id Sample description nTPM
Cerebellar cortex
nTPM: 148.1
2101 Male, age 74, right hemisphere 211.8
1774 Male, age 80, left hemisphere 191.8
1788 Male, age 55, unknown 178.8
2055 Female, age 91, right hemisphere 161.7
1768 Female, age 72, unknown 149.9
1769 Male, age 76, right hemisphere 110.4
2006 Male, age 61, right hemisphere 102.5
2003 Female, age 85, right hemisphere 78.2
Cerebellar nuclei
nTPM: 17.3
2318 Male, age 74, left hemisphere 111.1
1966 Female, age 91, left hemisphere 10.9
2005 Male, age 80, left hemisphere 7.5
2882 Male, age 76, left hemisphere 5.4
2177 Female, age 85, both hemispheres 4.6
1879 Male, age 55, unknown 4.4
2175 Male, age 61, right hemisphere 4.3
1871 Male, age 74, unknown 4.0
2783 Female, age 72, unknown 3.9
Flocculonodular lobe
nTPM: 160.4
1771 Male, age 80, left hemisphere 215.0
2176 Female, age 91, right hemisphere 188.2
1792 Male, age 74, unknown 181.7
1835 Female, age 85, right hemisphere 154.0
1765 Male, age 55, unknown 152.2
1767 Male, age 76, left hemisphere 120.7
2004 Male, age 61, right hemisphere 110.8
Vermis
nTPM: 171.5
1751 Male, age 74, right hemisphere 212.7
1778 Female, age 91, left hemisphere 206.0
1988 Female, age 85, left hemisphere 190.9
1825 Male, age 74, unknown 179.2
2834 Male, age 80, left hemisphere 166.1
1766 Male, age 55, unknown 160.5
2460 Male, age 61, both hemispheres 157.9
1928 Female, age 72, unknown 149.0
1770 Male, age 76, left hemisphere 120.9

CEREBELLUM - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

276.8
GTEx sample id Sample description nTPM
Brain - Cerebellar Hemisphere
Average nTPM: 276.8
Samples: 215

Max nTPM: 464.6
Min nTPM: 2.1
Std nTPM: 72.2
Median nTPM: 274.1
GTEX-1H4P4-0011-R11b-SM-CE6S8 50-59 years, male 464.6
GTEX-145MH-0011-R11a-SM-5P9HQ 50-59 years, male 462.6
GTEX-13FLV-0011-R11a-SM-5LZZ7 50-59 years, male 445.7
GTEX-12WSH-0011-R11a-SM-5LZVM 50-59 years, male 434.7
GTEX-ZE7O-0011-R11a-SM-57WBC 50-59 years, female 434.0
GTEX-145MI-0011-R11a-SM-5P9JZ 60-69 years, female 416.6
GTEX-145LU-0011-R11b-SM-5P9JX 50-59 years, male 410.1
GTEX-1313W-0011-R11a-SM-5DUXN 50-59 years, female 406.8
GTEX-131XW-0011-R11a-SM-5DUV9 50-59 years, female 406.6
GTEX-NL4W-0011-R11A-SM-2I3DW 50-59 years, male 402.5
GTEX-13FHP-0011-R11b-SM-5LZXP 50-59 years, male 399.2
GTEX-1GZHY-0011-R11a-SM-C1YRQ 50-59 years, female 398.3
GTEX-1BAJH-0011-R11b-SM-7IGLM 70-79 years, male 396.3
GTEX-ZE9C-0011-R11a-SM-4WKGG 60-69 years, male 395.4
GTEX-1F75W-0011-R11b-SM-AHZ34 60-69 years, male 393.7
GTEX-1B8L1-0011-R11b-SM-793DJ 60-69 years, male 390.2
GTEX-12WSD-0011-R11a-SM-9OSVC 60-69 years, female 385.6
GTEX-12WSF-0011-R11a-SM-5LZVT 70-79 years, male 383.3
GTEX-ZDXO-0011-R11a-SM-4WWD9 60-69 years, male 379.4
GTEX-13SLX-0011-R11b-SM-5O9C8 50-59 years, female 377.7
GTEX-1E1VI-0011-R11a-SM-9OSWI 50-59 years, male 374.4
GTEX-1B933-0011-R11a-SM-7P8PM 50-59 years, female 371.4
GTEX-13OW7-0011-R11a-SM-5O9DY 50-59 years, male 368.9
GTEX-17JCI-0011-R11a-SM-7189Y 60-69 years, female 368.5
GTEX-1F6I4-0011-R11b-SM-9OSWS 60-69 years, male 366.9
GTEX-17EVP-0011-R11a-SM-7EWDL 40-49 years, male 366.7
GTEX-ZVZQ-0011-R11a-SM-51MS6 60-69 years, female 362.5
GTEX-1F7RK-0011-R11b-SM-9QEI2 20-29 years, female 361.3
GTEX-13CF2-0011-R11b-SM-5LZXO 60-69 years, male 360.9
GTEX-13OW6-0011-R11a-SM-5L3H2 50-59 years, male 359.5
GTEX-18A6Q-0011-R11a-SM-72D6H 60-69 years, male 358.7
GTEX-13PLJ-0011-R11b-SM-5O9BS 60-69 years, female 357.4
GTEX-13JVG-0011-R11a-SM-5KM53 60-69 years, male 354.6
GTEX-13NYB-0011-R11a-SM-5KM3Q 40-49 years, male 352.4
GTEX-YJ89-0011-R11a-SM-4SOKA 60-69 years, male 349.8
GTEX-13OVL-0011-R11b-SM-5L3G7 50-59 years, male 346.1
GTEX-1B8SF-0011-R11a-SM-79OOP 60-69 years, male 345.7
GTEX-144GL-0011-R11b-SM-5P9F6 50-59 years, male 343.3
GTEX-1I1GV-0011-R11a-SM-CJI3Z 60-69 years, male 341.2
GTEX-13PVQ-0011-R11a-SM-5O9DU 50-59 years, male 340.6
GTEX-1IDJH-0011-R11b-SM-C1YRT 70-79 years, male 340.5
GTEX-13NZA-0011-R11b-SM-5KM4W 60-69 years, male 339.9
GTEX-NPJ8-0011-R11A-SM-2YUMS 40-49 years, male 339.6
GTEX-1J8Q2-0011-R11a-SM-A9SKI 60-69 years, male 339.0
GTEX-13QIC-0011-R11b-SM-5O9BU 60-69 years, female 337.4
GTEX-13O3Q-0011-R11b-SM-5KM2W 50-59 years, male 336.6
GTEX-11GSP-0011-R11b-SM-5NQ7V 60-69 years, female 335.4
GTEX-1C64N-0011-R11b-SM-7P8Q6 50-59 years, male 326.4
GTEX-1IOXB-0011-R11a-SM-A9G1X 50-59 years, male 324.4
GTEX-13FTY-0011-R11a-SM-5IJEA 40-49 years, female 323.9
GTEX-11OF3-0011-R11a-SM-57WCR 60-69 years, male 323.3
GTEX-N7MS-0011-R11A-SM-2HMJS 60-69 years, male 320.3
GTEX-RVPV-0011-R11A-SM-2TF6F 60-69 years, male 318.5
GTEX-1H3O1-0011-R11a-SM-A96RV 60-69 years, male 317.6
GTEX-18464-0011-R11a-SM-72D76 50-59 years, male 315.8
GTEX-13OW8-0011-R11a-SM-5L3GT 60-69 years, male 315.1
GTEX-1HFI6-0011-R11b-SM-A96RU 40-49 years, male 313.7
GTEX-1B8SG-0011-R11a-SM-7P8PF 50-59 years, male 312.9
GTEX-13OW5-0011-R11b-SM-5L3GG 60-69 years, male 312.4
GTEX-1GMRU-0011-R11b-SM-C1YQ4 50-59 years, male 312.3
GTEX-TSE9-0011-R11A-SM-3DB7N 60-69 years, female 312.0
GTEX-12WSE-0011-R11b-SM-5P9JW 20-29 years, male 311.5
GTEX-131YS-0011-R11b-SM-5EGLM 60-69 years, female 309.1
GTEX-1ICLZ-0011-R11a-SM-CJI3N 60-69 years, male 308.2
GTEX-12WSI-0011-R11b-SM-5P9EZ 50-59 years, male 306.6
GTEX-13X6J-0011-R11a-SM-5P9HE 50-59 years, male 304.6
GTEX-1CB4G-0011-R11a-SM-9OSWG 60-69 years, male 304.5
GTEX-139TT-0011-R11b-SM-5LZV1 60-69 years, male 299.6
GTEX-13FHO-0011-R11b-SM-5LZYQ 60-69 years, male 298.0
GTEX-Z93S-0011-R11a-SM-4RGNN 50-59 years, male 297.8
GTEX-13X6I-0011-R11a-SM-5P9HN 60-69 years, male 297.7
GTEX-11WQC-0011-R11b-SM-57WD6 60-69 years, male 297.4
GTEX-14E6D-0011-R11b-SM-664NP 50-59 years, male 296.5
GTEX-13G51-0011-R11b-SM-5J2NE 60-69 years, male 296.3
GTEX-11ZUS-0011-R11b-SM-5BC7B 30-39 years, male 295.5
GTEX-1399T-0011-R11a-SM-5J2O1 60-69 years, male 295.2
GTEX-1J8EW-0011-R11a-SM-AHZ37 60-69 years, female 294.9
GTEX-ZVT3-0011-R11b-SM-57WBI 60-69 years, female 294.5
GTEX-15G19-0011-R11b-SM-6LPIH 60-69 years, male 294.1
GTEX-1HCU6-0011-R11b-SM-AHZ2F 60-69 years, female 293.2
GTEX-XMD1-0011-R11A-SM-4AT5J 60-69 years, male 292.7
GTEX-1HBPI-0011-R11b-SM-CE6SH 50-59 years, male 292.3
GTEX-S7SE-0011-R11A-SM-2XCDD 50-59 years, male 292.2
GTEX-13OVJ-0011-R11a-SM-5P9H8 50-59 years, female 292.1
GTEX-17EVQ-0011-R11a-SM-7LT9C 70-79 years, male 291.7
GTEX-1EMGI-0011-R11b-SM-9OSWX 60-69 years, male 291.7
GTEX-1AX9I-0011-R11b-SM-7DHN4 60-69 years, male 290.6
GTEX-1HSKV-0011-R11b-SM-AHZ2E 60-69 years, male 289.8
GTEX-14BIM-0011-R11b-SM-5S2RN 60-69 years, female 289.4
GTEX-13JUV-0011-R11a-SM-5LZYH 40-49 years, female 288.9
GTEX-1M4P7-0011-R11b-SM-EXOIK 60-69 years, male 288.7
GTEX-NL3H-0011-R11A-SM-2I3E6 60-69 years, male 287.3
GTEX-14DAQ-0011-R11a-SM-664NO 60-69 years, female 287.2
GTEX-13FXS-0011-R11a-SM-5L3DM 50-59 years, male 287.0
GTEX-ZF28-0011-R11a-SM-4WWEI 60-69 years, male 286.4
GTEX-X261-0011-R11A-SM-4E3JY 50-59 years, male 285.5
GTEX-1H3VE-0011-R11b-SM-C1YRP 40-49 years, male 283.9
GTEX-11DZ1-0011-R11b-SM-DO11W 50-59 years, male 283.7
GTEX-1EKGG-0011-R11a-SM-9QEHZ 60-69 years, male 283.3
GTEX-WZTO-0011-R11A-SM-4E3K9 40-49 years, male 282.8
GTEX-X4EP-0011-R11B-SM-4QASK 60-69 years, female 282.0
GTEX-R55E-0011-R11A-SM-2TC6I 20-29 years, male 280.0
GTEX-1HGF4-0011-R11a-SM-C1YRR 60-69 years, male 279.6
GTEX-WHSE-0011-R11A-SM-3P5YY 20-29 years, male 278.8
GTEX-131XH-0011-R11a-SM-5EGLN 50-59 years, male 275.2
GTEX-14BIN-0011-R11a-SM-5SI79 50-59 years, female 274.7
GTEX-13O3O-0011-R11b-SM-5KM4G 60-69 years, female 274.1
GTEX-13SLW-0011-R11a-SM-5SI8Q 70-79 years, male 274.1
GTEX-14ABY-0011-R11a-SM-5SI7C 50-59 years, male 273.8
GTEX-16GPK-0011-R11b-SM-7MKFF 60-69 years, male 273.8
GTEX-T5JC-0011-R11A-SM-32PMB 20-29 years, male 273.2
GTEX-1N2DW-0011-R11b-SM-EXOIL 50-59 years, male 273.1
GTEX-1H1CY-0011-R11a-SM-C1YQR 60-69 years, female 273.0
GTEX-1I1GQ-0011-R11b-SM-CKZPA 50-59 years, male 273.0
GTEX-1IL2V-0011-R11a-SM-ARU6T 70-79 years, male 272.8
GTEX-11EMC-0011-R11b-SM-DNZZK 60-69 years, female 271.7
GTEX-1I19N-0011-R11b-SM-ARU6Y 70-79 years, male 270.8
GTEX-1KD4Q-0011-R11b-SM-EXOIE 40-49 years, male 270.6
GTEX-11EI6-0011-R11a-SM-DO11V 60-69 years, male 269.8
GTEX-13VXU-0011-R11b-SM-5O9DJ 50-59 years, male 269.4
GTEX-13RTJ-0011-R11a-SM-5O9CK 60-69 years, male 268.8
GTEX-13N2G-0011-R11a-SM-5MR3F 60-69 years, male 268.1
GTEX-12WSM-0011-R11a-SM-5DUX8 60-69 years, male 266.6
GTEX-12126-0011-R11a-SM-5BC6X 20-29 years, male 266.4
GTEX-132Q8-0011-R11b-SM-5DUW9 60-69 years, male 265.6
GTEX-15DYW-0011-R11a-SM-6LPIT 60-69 years, female 265.6
GTEX-1I1GR-0011-R11a-SM-CM2T5 60-69 years, male 265.5
GTEX-183WM-0011-R11a-SM-718A5 70-79 years, female 265.3
GTEX-1A3MX-0011-R11b-SM-7DUGP 60-69 years, male 265.2
GTEX-1HUB1-0011-R11b-SM-CE6SC 60-69 years, male 265.2
GTEX-1IKOH-0011-R11a-SM-AHZ38 60-69 years, female 262.3
GTEX-YFC4-0011-R11a-SM-4SOK6 40-49 years, female 262.1
GTEX-14ASI-0011-R11b-SM-6AJBJ 60-69 years, male 259.9
GTEX-ZUA1-0011-R11b-SM-51MTI 40-49 years, male 258.8
GTEX-1GMR8-0011-R11b-SM-9OSX2 50-59 years, female 258.2
GTEX-1GF9W-0011-R11b-SM-9OSXG 60-69 years, male 257.2
GTEX-1IY9M-0011-R11b-SM-A96TI 60-69 years, male 256.3
GTEX-12ZZX-0011-R11a-SM-5DUVJ 40-49 years, female 255.2
GTEX-18465-0011-R11a-SM-72D78 50-59 years, male 254.7
GTEX-17HG3-0011-R11b-SM-7KFT4 30-39 years, female 253.8
GTEX-1JJ6O-0011-R11b-SM-EXUS2 60-69 years, male 253.8
GTEX-1GZ4I-0011-R11b-SM-9OSWR 50-59 years, male 252.5
GTEX-WWYW-0011-R11A-SM-3NB38 50-59 years, female 250.6
GTEX-17F97-0011-R11b-SM-7KFRQ 50-59 years, male 250.4
GTEX-17HII-0011-R11b-SM-7KFSX 50-59 years, male 245.4
GTEX-1IGQW-0011-R11a-SM-C1YRV 60-69 years, male 245.4
GTEX-WL46-0011-R11A-SM-3MJFT 50-59 years, male 244.8
GTEX-13S7M-0011-R11b-SM-5P9HU 60-69 years, female 244.6
GTEX-X4XX-0011-R11A-SM-46MWQ 60-69 years, male 244.1
GTEX-16YQH-0011-R11b-SM-7LT98 30-39 years, male 239.7
GTEX-1HB9E-0011-R11b-SM-ARU79 50-59 years, male 239.6
GTEX-14E7W-0011-R11a-SM-5ZZVA 70-79 years, male 239.3
GTEX-1JMQJ-0011-R11a-SM-EXOJY 50-59 years, male 239.2
GTEX-1LG7Y-0011-R11a-SM-EXOIH 50-59 years, male 236.8
GTEX-Y8DK-0011-R11A-SM-4SOK2 60-69 years, male 236.7
GTEX-P44G-0011-R11A-SM-2I3FD 30-39 years, male 236.0
GTEX-11PRG-0011-R11b-SM-DNZZY 50-59 years, male 235.9
GTEX-Q2AG-0011-R11A-SM-2HMKZ 40-49 years, female 235.7
GTEX-1IKK5-0011-R11a-SM-C1YRX 60-69 years, male 235.0
GTEX-1LSVX-0011-R11b-SM-EXOIA 60-69 years, male 234.4
GTEX-1F75A-0011-R11a-SM-AHZ35 50-59 years, male 233.6
GTEX-11DYG-0011-R11a-SM-DNZZP 60-69 years, male 233.2
GTEX-13OVH-0011-R11b-SM-5KM4X 70-79 years, male 232.6
GTEX-1R9K4-0011-R11a-SM-EZ6N9 60-69 years, male 232.1
GTEX-1F48J-0011-R11b-SM-9OSWV 50-59 years, female 231.5
GTEX-WVLH-0011-R11A-SM-3MJFO 50-59 years, male 231.1
GTEX-ZAB4-0011-R11a-SM-4SOKI 40-49 years, male 229.6
GTEX-RU72-0011-R11A-SM-CM2U1 50-59 years, female 228.7
GTEX-13CZV-0011-R11b-SM-5N9FN 60-69 years, male 228.0
GTEX-15ER7-0011-R11a-SM-6LPIL 20-29 years, female 227.9
GTEX-NPJ7-0011-R11A-SM-2I3E8 60-69 years, female 227.2
GTEX-1I1HK-0011-R11a-SM-B2LVN 60-69 years, male 226.7
GTEX-1N2EE-0011-R11b-SM-EXOIJ 60-69 years, male 226.0
GTEX-X585-0011-R11B-SM-46MUZ 50-59 years, male 225.7
GTEX-1J1OQ-0011-R11a-SM-A96S3 40-49 years, female 222.3
GTEX-12ZZZ-0011-R11a-SM-5EGLC 60-69 years, male 219.8
GTEX-1F52S-0011-R11a-SM-CJI23 60-69 years, female 217.3
GTEX-1IL2U-0011-R11a-SM-CE6SO 60-69 years, male 216.9
GTEX-11DXY-0011-R11a-SM-DNZZN 60-69 years, male 213.9
GTEX-11ZTS-0011-R11a-SM-DO113 60-69 years, female 212.6
GTEX-13NYS-0011-R11b-SM-5MR4P 60-69 years, male 201.6
GTEX-1H3NZ-0011-R11b-SM-CE6SF 60-69 years, male 198.8
GTEX-15CHQ-0011-R11b-SM-686ZZ 60-69 years, male 197.0
GTEX-1LVAO-0011-R11b-SM-EXOI8 60-69 years, male 196.0
GTEX-16NPV-0011-R11a-SM-7IGMK 50-59 years, female 194.8
GTEX-14PN4-0011-R11a-SM-686ZW 50-59 years, male 193.2
GTEX-1GTWX-0011-R11b-SM-C1YQJ 60-69 years, male 193.2
GTEX-16XZZ-0011-R11a-SM-7EPI3 60-69 years, male 189.1
GTEX-1H1DG-0011-R11a-SM-C1YQK 70-79 years, male 188.6
GTEX-13X6K-0011-R11a-SM-5P9F5 60-69 years, female 187.4
GTEX-11TTK-0011-R11b-SM-DO112 60-69 years, female 185.8
GTEX-139UW-0011-R11a-SM-5IJGN 60-69 years, male 185.2
GTEX-1I1GS-0011-R11a-SM-C1YRU 60-69 years, male 184.9
GTEX-T6MN-0011-R11A-SM-32QOX 50-59 years, male 184.4
GTEX-12WSC-0011-R11a-SM-5GU5J 50-59 years, male 183.8
GTEX-1CAV2-0011-R11a-SM-ARU8D 40-49 years, female 183.6
GTEX-1LKK1-0011-R11a-SM-EXOIG 50-59 years, female 180.3
GTEX-T2IS-0011-R11A-SM-32QPC 20-29 years, female 175.0
GTEX-14C39-0011-R11b-SM-5YYAF 40-49 years, male 174.2
GTEX-UTHO-0011-R11A-SM-3GIJE 60-69 years, male 172.1
GTEX-16Z82-0011-R11a-SM-79OKJ 60-69 years, male 171.7
GTEX-15DCD-0011-R11a-SM-D4P1R 70-79 years, female 170.6
GTEX-11H98-0011-R11b-SM-5NQ6U 50-59 years, male 170.4
GTEX-1GN73-0011-R11b-SM-9OSX4 60-69 years, male 164.8
GTEX-1JJEA-0011-R11a-SM-EXUTE 60-69 years, male 159.6
GTEX-14C5O-0011-R11b-SM-6872H 60-69 years, male 158.6
GTEX-OHPN-0011-R11A-SM-2I5FM 60-69 years, female 154.7
GTEX-1JMOU-0011-R11b-SM-EXUTA 60-69 years, female 148.1
GTEX-1H1ZS-0011-R11a-SM-C1YQM 70-79 years, male 147.4
GTEX-1R9PO-0011-R11b-SM-EZ6NB 60-69 years, female 141.9
GTEX-15EO6-0011-R11b-SM-6M47M 50-59 years, male 135.7
GTEX-QMR6-0011-R11A-SM-32PKK 50-59 years, male 131.7
GTEX-P44H-0011-R11A-SM-2XCER 40-49 years, male 105.4
GTEX-QDT8-0011-R11A-SM-32PKD 30-39 years, female 97.8
GTEX-N7MT-0011-R11A-SM-2I3DZ 60-69 years, female 2.1
Show allShow less
Brain - Cerebellum
Average nTPM: 276.8
Samples: 241

Max nTPM: 464.6
Min nTPM: 71.0
Std nTPM: 72.7
Median nTPM: 280.0
GTEX-ZDXO-2926-SM-4WKFM 60-69 years, male 464.6
GTEX-1E1VI-2926-SM-7IGLT 50-59 years, male 460.8
GTEX-11ZUS-2826-SM-5EQKW 30-39 years, male 456.3
GTEX-16Z82-2926-SM-6LPJJ 60-69 years, male 452.9
GTEX-14JIY-2326-SM-6AJAJ 60-69 years, male 429.7
GTEX-17F97-2926-SM-7DUEQ 50-59 years, male 420.3
GTEX-14E7W-2926-SM-5S2R8 70-79 years, male 419.4
GTEX-1NV8Z-3026-SM-DTX8Z 60-69 years, male 418.4
GTEX-139TS-3126-SM-5LZWX 60-69 years, male 418.1
GTEX-13OW7-2926-SM-5MR3Z 50-59 years, male 417.8
GTEX-1B8SG-1926-SM-73KUB 50-59 years, male 413.9
GTEX-1B8L1-3226-SM-7P8OX 60-69 years, male 409.1
GTEX-13FHP-2926-SM-5IJG9 50-59 years, male 407.6
GTEX-ZAK1-2926-SM-5HL9S 50-59 years, female 385.2
GTEX-13O3Q-3026-SM-5IJGD 50-59 years, male 382.6
GTEX-13PVQ-2926-SM-5L3HJ 50-59 years, male 381.5
GTEX-1313W-3026-SM-5LZUZ 50-59 years, female 381.4
GTEX-1C6VR-3026-SM-7IGLW 60-69 years, male 380.8
GTEX-131XH-2926-SM-5LZU4 50-59 years, male 379.1
GTEX-13NYB-3226-SM-5J2ND 40-49 years, male 373.1
GTEX-13SLX-3226-SM-5YYA6 50-59 years, female 371.8
GTEX-12WSH-3126-SM-5LZW8 50-59 years, male 370.9
GTEX-12126-0926-SM-5FQTW 20-29 years, male 368.8
GTEX-13OW5-3126-SM-5MR3Y 60-69 years, male 367.9
GTEX-12WSM-2126-SM-5GCOC 60-69 years, male 367.8
GTEX-1399T-3126-SM-5IJFS 60-69 years, male 367.0
GTEX-1GZHY-3026-SM-7MXVA 50-59 years, female 363.2
GTEX-17HG3-2826-SM-7EPGO 30-39 years, female 363.0
GTEX-11EI6-2926-SM-5985U 60-69 years, male 362.8
GTEX-1HBPH-3026-SM-9WPNY 40-49 years, female 360.0
GTEX-1H4P4-2726-SM-9JGGB 50-59 years, male 358.8
GTEX-131YS-3026-SM-5EGHY 60-69 years, female 358.0
GTEX-1C64N-3126-SM-79OO3 50-59 years, male 355.4
GTEX-ZYFD-2926-SM-5GID9 50-59 years, male 355.1
GTEX-145MH-2926-SM-5Q5D2 50-59 years, male 354.5
GTEX-12WSC-2926-SM-5BC5Z 50-59 years, male 351.0
GTEX-YJ89-2926-SM-5P9IT 60-69 years, male 350.8
GTEX-1192X-3226-SM-5987D 50-59 years, male 349.9
GTEX-117XS-3126-SM-5GIDP 60-69 years, male 348.1
GTEX-1269C-3126-SM-5EGI6 60-69 years, female 345.1
GTEX-11GSP-3126-SM-5A5LL 60-69 years, female 344.0
GTEX-Y111-2826-SM-4TT3O 50-59 years, male 342.8
GTEX-11GSO-3026-SM-5Q5AL 60-69 years, male 340.9
GTEX-11O72-2826-SM-5HL6W 40-49 years, male 340.5
GTEX-11DXW-1026-SM-5H11K 40-49 years, male 340.2
GTEX-11DZ1-2926-SM-5A5KI 50-59 years, male 340.2
GTEX-14BMV-2926-SM-5TDEE 50-59 years, male 336.8
GTEX-1IDJH-3126-SM-C1YQS 70-79 years, male 336.0
GTEX-1EKGG-3126-SM-9WPO5 60-69 years, male 335.6
GTEX-13OW6-2926-SM-5KM29 50-59 years, male 335.1
GTEX-TSE9-2926-SM-3DB77 60-69 years, female 335.0
GTEX-13G51-3126-SM-5IJG7 60-69 years, male 332.7
GTEX-11NUK-3026-SM-5986K 50-59 years, male 331.6
GTEX-16YQH-2926-SM-6LPJE 30-39 years, male 330.0
GTEX-147GR-3126-SM-5S2PM 60-69 years, male 329.4
GTEX-1C6WA-3326-SM-7MKGN 60-69 years, male 329.1
GTEX-WL46-2826-SM-3LK81 50-59 years, male 329.0
GTEX-ZUA1-2926-SM-59HL3 40-49 years, male 326.4
GTEX-1IKOH-2826-SM-CNNRC 60-69 years, female 325.1
GTEX-13JVG-3226-SM-5IJGJ 60-69 years, male 323.8
GTEX-Z93S-2826-SM-57WBL 50-59 years, male 323.5
GTEX-1F6I4-3026-SM-7P8SI 60-69 years, male 321.4
GTEX-1HBPI-2726-SM-9WPPF 50-59 years, male 321.4
GTEX-14E6D-2926-SM-664OP 50-59 years, male 321.2
GTEX-1EX96-3126-SM-9JGGC 50-59 years, male 321.0
GTEX-14JFF-2826-SM-6871Q 60-69 years, male 320.5
GTEX-1H3O1-1826-SM-A96TO 60-69 years, male 319.0
GTEX-13QIC-3026-SM-5LU58 60-69 years, female 318.1
GTEX-NPJ8-2626-SM-2D7W2 40-49 years, male 317.1
GTEX-1A3MX-2926-SM-718B7 60-69 years, male 316.0
GTEX-12ZZY-2926-SM-5DUXO 60-69 years, male 315.5
GTEX-14BIN-3326-SM-5Q5E6 50-59 years, female 314.1
GTEX-13OVL-3026-SM-5IJF1 50-59 years, male 313.9
GTEX-1POEN-2726-SM-E9U6B 30-39 years, female 312.9
GTEX-1JJ6O-3026-SM-C1YQH 60-69 years, male 311.6
GTEX-1GZ2Q-3026-SM-9JGG3 40-49 years, male 311.0
GTEX-YFC4-3026-SM-5IFJK 40-49 years, female 308.5
GTEX-12WSE-2926-SM-5RQJ9 20-29 years, male 307.2
GTEX-15G19-2826-SM-6M48K 60-69 years, male 303.8
GTEX-1HSKV-2926-SM-B2LWJ 60-69 years, male 303.1
GTEX-17EVP-2926-SM-793BU 40-49 years, male 302.5
GTEX-1QEPI-3026-SM-EXOIW 60-69 years, female 301.4
GTEX-147F4-3026-SM-5Q5BJ 50-59 years, male 301.3
GTEX-144GL-2926-SM-5O99F 50-59 years, male 300.8
GTEX-X261-3126-SM-4PQZC 50-59 years, male 300.7
GTEX-1HCVE-2926-SM-9WPPJ 50-59 years, male 300.5
GTEX-145LU-2626-SM-5LU9Z 50-59 years, male 300.0
GTEX-T5JC-2326-SM-32PMR 20-29 years, male 297.8
GTEX-ZAJG-3026-SM-5HL92 50-59 years, female 295.4
GTEX-13CF2-3026-SM-5IFFX 60-69 years, male 295.2
GTEX-14ABY-3026-SM-664NE 50-59 years, male 294.8
GTEX-15ER7-3026-SM-6M47W 20-29 years, female 294.7
GTEX-1IL2V-3026-SM-CYPSA 70-79 years, male 294.6
GTEX-13112-2926-SM-5DUWT 50-59 years, male 294.4
GTEX-1I1GV-3026-SM-CNNR9 60-69 years, male 293.7
GTEX-17JCI-3026-SM-7EWDR 60-69 years, female 292.2
GTEX-14BIM-3126-SM-5Q5C7 60-69 years, female 291.9
GTEX-145MF-2826-SM-7EPGU 50-59 years, male 291.0
GTEX-11ZVC-3026-SM-59HJM 50-59 years, female 290.8
GTEX-13OW8-2926-SM-5L3FV 60-69 years, male 288.8
GTEX-1MJK2-3026-SM-EV7A5 50-59 years, male 288.7
GTEX-XMD1-2826-SM-4AT5F 60-69 years, male 287.8
GTEX-1KD4Q-3026-SM-EV7A7 40-49 years, male 287.5
GTEX-14JG1-2926-SM-686ZK 40-49 years, male 286.1
GTEX-13N2G-3126-SM-5IJGL 60-69 years, male 285.1
GTEX-1F75W-3126-SM-7P8SJ 60-69 years, male 285.1
GTEX-145MG-3126-SM-5Q5D3 50-59 years, male 285.0
GTEX-13S7M-3026-SM-5S2QQ 60-69 years, female 284.5
GTEX-1EMGI-3126-SM-7MXUR 60-69 years, male 284.5
GTEX-13VXU-3026-SM-5LU3K 50-59 years, male 283.9
GTEX-1JN1M-3126-SM-AHZ4E 60-69 years, female 283.8
GTEX-1GF9V-3026-SM-7P8R8 60-69 years, male 283.5
GTEX-1RQEC-3026-SM-DPRXM 60-69 years, male 282.5
GTEX-13FXS-3026-SM-5LZYO 50-59 years, male 282.0
GTEX-1B8SF-3026-SM-731DX 60-69 years, male 281.7
GTEX-1I1CD-2926-SM-A96SJ 60-69 years, female 281.5
GTEX-1A8G6-3126-SM-731D8 60-69 years, male 281.4
GTEX-11ZTS-3226-SM-5EGID 60-69 years, female 281.3
GTEX-17HII-2926-SM-79OMK 50-59 years, male 280.7
GTEX-Y8DK-0726-SM-4TT3S 60-69 years, male 280.6
GTEX-17EVQ-2726-SM-7EWDT 70-79 years, male 280.0
GTEX-14DAQ-3026-SM-5S2QZ 60-69 years, female 279.0
GTEX-1RNSC-3126-SM-EVR4V 60-69 years, male 278.8
GTEX-13FHO-2926-SM-5L3ES 60-69 years, male 278.3
GTEX-145LS-3026-SM-5O99S 60-69 years, female 278.3
GTEX-1B933-3026-SM-731DB 50-59 years, female 278.2
GTEX-14C39-3026-SM-5S2QE 40-49 years, male 277.7
GTEX-ZVT3-2926-SM-5GU6M 60-69 years, female 275.9
GTEX-1CB4G-2926-SM-7MKFQ 60-69 years, male 275.7
GTEX-17HHY-2926-SM-79OJW 50-59 years, male 275.4
GTEX-12ZZZ-3126-SM-5LZU6 60-69 years, male 275.3
GTEX-1H1CY-3026-SM-9OSW7 60-69 years, female 275.3
GTEX-11EMC-3326-SM-5P9JH 60-69 years, female 273.8
GTEX-1F75A-2926-SM-7MXVN 50-59 years, male 272.7
GTEX-12WSD-3026-SM-5LZU7 60-69 years, female 272.6
GTEX-13O3O-3026-SM-5KM42 60-69 years, female 272.6
GTEX-T6MN-2526-SM-32PMN 50-59 years, male 272.3
GTEX-1BAJH-3126-SM-7MGXY 70-79 years, male 271.8
GTEX-WHSE-2926-SM-3NMBG 20-29 years, male 270.8
GTEX-1PIIG-2826-SM-DTX7O 30-39 years, male 270.2
GTEX-12ZZX-2826-SM-5BC6K 40-49 years, female 270.1
GTEX-1HSMO-2926-SM-C1YR5 60-69 years, male 268.9
GTEX-111FC-3326-SM-5GZYV 60-69 years, male 268.3
GTEX-R55E-2526-SM-2TC6H 20-29 years, male 268.3
GTEX-1LG7Y-3126-SM-EV7AS 50-59 years, male 268.0
GTEX-1EU9M-2926-SM-793DF 60-69 years, male 266.8
GTEX-11ONC-3026-SM-5985W 60-69 years, male 266.6
GTEX-N7MS-2526-SM-2D7W3 60-69 years, male 266.6
GTEX-ZF28-2926-SM-4WKG1 60-69 years, male 265.2
GTEX-1F6IF-3026-SM-7P8QN 60-69 years, male 263.8
GTEX-1JMQJ-3126-SM-EV79G 50-59 years, male 263.6
GTEX-13RTJ-3126-SM-5S2Q4 60-69 years, male 261.6
GTEX-14PJM-3026-SM-6LLHM 50-59 years, female 260.3
GTEX-1QP6S-3026-SM-EAZ4N 40-49 years, male 256.7
GTEX-1KWVE-2226-SM-CXZKN 30-39 years, male 256.6
GTEX-1RDX4-3226-SM-DPS14 50-59 years, female 255.5
GTEX-1EWIQ-3026-SM-7IGOJ 70-79 years, female 255.0
GTEX-11DXY-3126-SM-5N9BT 60-69 years, male 254.8
GTEX-X4XX-2926-SM-3NMB1 60-69 years, male 254.0
GTEX-S7SE-2526-SM-2XCDL 50-59 years, male 252.7
GTEX-Q2AG-2826-SM-2HMJQ 40-49 years, female 246.9
GTEX-183WM-2726-SM-7KFRF 70-79 years, female 246.1
GTEX-11NV4-2226-SM-5BC4T 60-69 years, male 245.3
GTEX-14ASI-2926-SM-5Q5DG 60-69 years, male 244.3
GTEX-1P4AB-3026-SM-EXOJS 50-59 years, male 242.6
GTEX-XLM4-2926-SM-4AT59 60-69 years, male 242.1
GTEX-UTHO-2926-SM-3P5Z9 60-69 years, male 241.2
GTEX-11PRG-2826-SM-5BC54 50-59 years, male 239.9
GTEX-139TT-2626-SM-5LZUB 60-69 years, male 239.1
GTEX-WVLH-2926-SM-3MJG5 50-59 years, male 238.7
GTEX-1128S-2826-SM-5N9DI 60-69 years, female 237.9
GTEX-1JMLX-3026-SM-EV79Q 50-59 years, male 237.1
GTEX-11DYG-2926-SM-5H132 60-69 years, male 237.0
GTEX-13OVJ-2726-SM-5IJG6 50-59 years, female 234.7
GTEX-ZYY3-3026-SM-5GIEJ 60-69 years, female 234.1
GTEX-PVOW-2626-SM-32PL8 40-49 years, male 233.8
GTEX-1JMQK-2926-SM-D4P2T 60-69 years, male 231.2
GTEX-1LSVX-2826-SM-EVR58 60-69 years, male 231.1
GTEX-14PN4-3026-SM-664O4 50-59 years, male 230.5
GTEX-X4EP-3026-SM-3P5YP 60-69 years, female 230.2
GTEX-1GTWX-2926-SM-7MXV4 60-69 years, male 230.0
GTEX-1IY9M-3126-SM-AHZ3A 60-69 years, male 229.0
GTEX-1HB9E-3126-SM-AHZ4M 50-59 years, male 227.7
GTEX-WZTO-2826-SM-3NM8P 40-49 years, male 225.9
GTEX-15DYW-3026-SM-7KFRM 60-69 years, female 224.4
GTEX-13OVH-2926-SM-5IJFH 70-79 years, male 222.6
GTEX-1JJEA-2926-SM-C1YSK 60-69 years, male 222.2
GTEX-13X6K-2826-SM-5O9DS 60-69 years, female 219.6
GTEX-14A5I-2826-SM-5SIBF 50-59 years, female 219.1
GTEX-13X6I-2926-SM-5Q5C3 60-69 years, male 218.9
GTEX-1H1DG-2826-SM-9JGHB 70-79 years, male 218.5
GTEX-WWYW-3026-SM-3NB36 50-59 years, female 218.0
GTEX-18A6Q-2826-SM-7LTAO 60-69 years, male 216.8
GTEX-1R9PO-2826-SM-E6CPV 60-69 years, female 216.2
GTEX-ZAB4-2926-SM-57WCV 40-49 years, male 215.6
GTEX-1GZ4I-2926-SM-9JGGO 50-59 years, male 214.4
GTEX-N7MT-1226-SM-DKPOK 60-69 years, female 214.2
GTEX-1CB4H-3026-SM-79OLX 60-69 years, female 207.3
GTEX-18465-2926-SM-7KFSE 50-59 years, male 206.6
GTEX-13JUV-3026-SM-5K7WX 40-49 years, female 206.4
GTEX-1GN73-3026-SM-7MXV8 60-69 years, male 206.1
GTEX-1A8G7-3026-SM-73KTT 60-69 years, male 204.0
GTEX-P44G-2526-SM-2I5EK 30-39 years, male 202.5
GTEX-1JMPZ-2826-SM-C1YRA 30-39 years, male 201.9
GTEX-PWO3-1026-SM-2I5F2 60-69 years, female 201.0
GTEX-11TTK-2826-SM-5GU5K 60-69 years, female 197.0
GTEX-11OC5-0626-SM-5HL6M 60-69 years, male 193.7
GTEX-T2IS-2926-SM-32QPO 20-29 years, female 193.0
GTEX-QVUS-2926-SM-3GIJB 60-69 years, female 192.6
GTEX-1F48J-2726-SM-7P8PW 50-59 years, female 188.8
GTEX-1F52S-3026-SM-7P8PV 60-69 years, female 188.3
GTEX-1EH9U-3126-SM-7MXU5 60-69 years, male 186.0
GTEX-1J1OQ-3126-SM-D4P2O 40-49 years, female 184.7
GTEX-RU72-2926-SM-2TF66 50-59 years, female 184.3
GTEX-1KANB-3226-SM-D4P3G 50-59 years, male 182.3
GTEX-1I1HK-2726-SM-AHZ2M 60-69 years, male 181.8
GTEX-13X6J-2926-SM-7EPGP 50-59 years, male 179.8
GTEX-15SHU-3026-SM-6LPIB 40-49 years, female 179.7
GTEX-15EO6-2926-SM-6M48D 50-59 years, male 179.0
GTEX-QVJO-1325-SM-2S1QX 60-69 years, female 176.8
GTEX-1E2YA-2926-SM-7MGWX 50-59 years, male 176.4
GTEX-1JJE9-3026-SM-CNNPA 70-79 years, male 174.0
GTEX-1H3NZ-2926-SM-9WPQ8 60-69 years, male 168.9
GTEX-RNOR-2226-SM-2TF5O 50-59 years, female 167.3
GTEX-16XZZ-2926-SM-6LPK4 60-69 years, male 163.9
GTEX-14C5O-2926-SM-5RQI1 60-69 years, male 161.7
GTEX-1R46S-3126-SM-DPRZ9 60-69 years, female 157.4
GTEX-1H3VE-2826-SM-9WPOL 40-49 years, male 152.7
GTEX-14PJO-2926-SM-686ZI 60-69 years, male 144.8
GTEX-1H1ZS-2926-SM-9WPP2 70-79 years, male 144.6
GTEX-132Q8-2926-SM-5IFFP 60-69 years, male 144.2
GTEX-ZZPT-2926-SM-5EQ5S 50-59 years, male 143.5
GTEX-NPJ7-2826-SM-2I3FU 60-69 years, female 139.5
GTEX-1GF9W-2726-SM-9JGGW 60-69 years, male 139.0
GTEX-QDT8-3026-SM-32PKB 30-39 years, female 136.9
GTEX-QMR6-1326-SM-32PLB 50-59 years, male 132.3
GTEX-OHPN-2626-SM-2I5H1 60-69 years, female 130.0
GTEX-1B996-2926-SM-7MXUH 60-69 years, male 126.7
GTEX-1JMOU-2826-SM-EV79R 60-69 years, female 125.2
GTEX-P44H-2426-SM-2XCEJ 40-49 years, male 92.9
GTEX-1PWST-3026-SM-EAZ3H 70-79 years, male 71.0
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CEREBELLUM - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

428.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Cerebellum
Scaled Tags Per Million: 428.9
FF:10083-102B2 22-68 years, mixed 575.6
FF:10166-103B4 76 years, female 282.1

CEREBELLUM - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

178.6
Pig sample Sample description nTPM
Cerebellum
nTPM: 178.6
Samples: 4

Max nTPM: 225.4
Min nTPM: 135.8
Sample A Female 225.4
Sample B Female 171.3
Sample C Male 135.8
Sample D Male 181.7

CEREBELLUM - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

79.1
Mouse sample Sample description nTPM
Cerebellum
nTPM: 79.1
Samples: 4

Max nTPM: 87.7
Min nTPM: 74.6
Sample A Male 87.7
Sample B Male 75.2
Sample C Female 74.6
Sample D Female 78.7

CEREBELLUM - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

29.5
Allen experiment id Experiment description Expression energy
Cerebellum
Expression energy: 29.5
69257737 Antisense, RP_050331_03_C04, Mouse strain C57BL/6J (56 days, male) 29.5
71247631 Antisense, RP_050331_03_C04, Mouse strain C57BL/6J (56 days, male) 23.8

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