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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:82.6 nTPM
HPA Brain:53.3 nTPM
GTEx:82.6 nTPM
FANTOM5:38.3 Scaled Tags Per Million
Pig:58.5 nTPM
Mouse:43.1 nTPM
Allen mouse:7.9 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA055490Antibody CAB034338
Glial cells LowHigh
Neuronal cells MediumHigh



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

53.3
Sample id Sample description nTPM
Caudate nucleus
nTPM: 49.2
2481 Female, age 94, left hemisphere 54.9
2290 Female, age 72, unknown 53.4
1857 Female, age 85, left hemisphere 51.2
2846 Female, age 79, unknown 48.6
1781 Male, age 74, unknown 47.7
2288 Male, age 75, left hemisphere 47.0
1854 Male, age 80, left hemisphere 46.6
2289 Male, age 61, right hemisphere 44.3
Globus pallidus, externus
nTPM: 44.8
2772 Female, age 79, unknown 54.2
1996 Male, age 80, right hemisphere 54.0
2395 Male, age 75, both hemispheres 48.4
2646 Male, age 61, right hemisphere 39.7
2567 Female, age 72, unknown 27.9
Globus pallidus, internus
nTPM: 47.7
2037 Male, age 80, right hemisphere 55.0
2287 Male, age 75, right hemisphere 54.4
2483 Female, age 94, right hemisphere 50.4
2778 Female, age 91, both hemispheres 49.2
1818 Male, age 74, unknown 47.8
2111 Female, age 85, right hemisphere 41.1
2566 Female, age 72, unknown 35.7
Nucleus accumbens
nTPM: 53.3
2698 Female, age 72, unknown 58.9
2391 Female, age 94, left hemisphere 57.2
1856 Female, age 91, right hemisphere 57.1
1783 Male, age 74, unknown 56.5
1806 Female, age 85, left hemisphere 55.6
2286 Male, age 75, left hemisphere 55.5
2824 Male, age 61, right hemisphere 44.7
2732 Male, age 80, right hemisphere 41.0
Nucleus basalis of Meynert
nTPM: 45.0
2821 Male, age 75, both hemispheres 50.9
2393 Male, age 80, right hemisphere 44.2
2484 Female, age 94, left hemisphere 42.8
2569 Male, age 61, both hemispheres 42.3
Nucleus of the diagonal band
nTPM: 46.2
1812 Female, age 91, both hemispheres 54.9
2195 Female, age 85, both hemispheres 47.2
2775 Male, age 80, right hemisphere 45.4
1979 Male, age 74, unknown 42.2
2029 Male, age 61, right hemisphere 41.3
Putamen
nTPM: 46.9
1838 Male, age 80, right hemisphere 52.5
2482 Female, age 94, left hemisphere 52.3
1937 Female, age 91, right hemisphere 51.4
1829 Male, age 74, unknown 48.6
2466 Female, age 79, unknown 43.8
2489 Female, age 72, unknown 41.3
2647 Male, age 75, left hemisphere 38.5
Septal nuclei
nTPM: 42.9
2031 Female, age 72, unknown 53.0
1960 Male, age 74, unknown 44.5
2629 Female, age 94, right hemisphere 43.6
2009 Female, age 91, both hemispheres 43.0
2199 Male, age 80, right hemisphere 40.0
2394 Male, age 61, left hemisphere 38.2
2059 Female, age 85, both hemispheres 37.9
Stria terminalis, bed nucleus
nTPM: 39.2
1974 Female, age 91, both hemispheres 44.8
2486 Female, age 94, both hemispheres 36.5
2201 Male, age 74, unknown 36.3

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

82.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 73.9
Samples: 246

Max nTPM: 171.3
Min nTPM: 46.5
Std nTPM: 18.2
Median nTPM: 70.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 171.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 155.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 152.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 134.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 127.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 124.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 124.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 123.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 114.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 113.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 111.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 108.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 107.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 107.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 107.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 104.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 104.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 103.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 101.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 100.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 98.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 97.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 95.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 94.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 94.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 94.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 93.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 91.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 91.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 91.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 90.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 90.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 89.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 89.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 89.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 88.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 88.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 88.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 87.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 87.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 87.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 86.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 86.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 86.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 86.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 86.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 85.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 85.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 85.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 85.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 85.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 84.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 83.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 83.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 82.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 81.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 80.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 80.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 80.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 80.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 79.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 78.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 78.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 78.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 78.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 78.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 78.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 78.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 78.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 77.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 77.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 77.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 77.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 77.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 77.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 77.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 76.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 76.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 76.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 76.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 76.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 75.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 75.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 75.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 75.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 75.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 75.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 75.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 74.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 74.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 74.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 74.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 74.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 73.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 73.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 73.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 73.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 73.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 73.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 73.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 73.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 73.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 73.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 73.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 72.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 72.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 72.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 72.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 72.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 72.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 72.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 72.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 72.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 71.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 71.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 71.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 71.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 70.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 70.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 70.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 70.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 70.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 70.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 70.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 70.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 69.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 69.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 69.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 69.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 69.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 69.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 69.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 69.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 69.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 69.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 68.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 68.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 68.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 68.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 68.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 68.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 68.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 67.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 67.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 67.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 67.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 67.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 67.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 67.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 67.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 67.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 67.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 66.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 66.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 66.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 66.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 66.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 66.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 66.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 66.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 66.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 66.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 65.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 65.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 65.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 65.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 65.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 64.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 64.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 64.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 64.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 64.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 64.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 64.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 64.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 64.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 64.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 63.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 63.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 63.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 63.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 63.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 63.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 63.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 62.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 62.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 62.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 62.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 62.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 61.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 61.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 60.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 60.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 60.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 60.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 59.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 59.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 59.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 59.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 59.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 59.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 59.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 58.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 58.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 58.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 58.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 58.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 58.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 58.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 58.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 57.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 57.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 57.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 57.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 57.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 56.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 56.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 56.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 56.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 56.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 56.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 55.9
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 55.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 55.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 55.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 54.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 54.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 54.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 54.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 54.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 54.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 53.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 53.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 52.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 52.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 51.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 51.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 51.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 51.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 51.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 51.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 50.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 49.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 48.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 48.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 46.5
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 82.6
Samples: 246

Max nTPM: 155.0
Min nTPM: 47.3
Std nTPM: 17.8
Median nTPM: 80.8
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 155.0
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 154.8
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 135.0
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 133.4
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 127.9
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 127.3
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 126.8
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 123.0
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 121.3
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 120.6
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 119.4
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 117.8
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 116.3
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 114.9
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 113.2
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 112.9
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 112.1
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 112.0
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 111.6
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 109.5
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 108.1
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 107.9
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 107.2
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 107.2
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 107.2
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 107.0
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 105.8
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 105.7
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 105.5
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 104.9
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 104.5
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 104.2
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 103.1
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 102.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 101.3
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 100.9
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 100.5
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 100.4
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 98.6
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 98.6
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 98.2
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 98.1
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 97.6
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 96.8
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 96.1
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 96.1
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 95.4
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 94.0
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 93.6
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 93.6
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 93.6
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 93.6
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 93.3
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 92.3
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 91.8
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 91.6
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 91.3
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 90.9
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 90.9
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 90.7
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 90.2
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 89.9
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 89.2
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 89.2
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 89.1
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 89.1
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 88.8
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 88.8
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 88.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 88.4
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 88.4
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 88.2
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 88.1
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 88.1
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 88.0
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 88.0
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 87.9
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 87.6
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 87.4
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 87.4
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 87.1
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 86.9
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 86.9
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 86.5
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 86.3
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 86.2
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 85.6
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 85.5
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 85.5
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 85.5
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 85.5
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 85.4
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 85.4
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 85.0
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 84.8
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 84.6
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 84.3
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 83.9
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 83.8
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 83.8
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 83.8
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 83.6
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 83.5
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 83.4
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 83.3
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 83.2
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 82.9
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 82.9
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 82.8
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 82.6
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 82.6
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 82.5
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 82.5
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 82.5
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 82.4
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 82.4
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 81.8
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 81.6
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 81.4
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 81.4
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 81.2
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 81.0
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 80.8
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 80.8
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 80.3
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 79.9
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 79.7
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 79.4
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 79.3
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 79.1
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 79.1
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 78.7
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 78.7
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 78.3
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 78.2
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 78.2
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 78.0
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 78.0
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 77.6
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 77.4
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 77.3
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 77.2
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 76.8
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 76.8
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 76.7
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 76.6
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 76.6
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 76.5
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 76.3
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 75.9
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 75.5
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 75.5
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 75.4
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 75.3
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 75.2
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 75.2
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 74.8
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 74.8
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 74.5
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 74.4
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 74.3
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 74.3
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 74.1
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 73.9
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 73.6
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 73.6
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 73.6
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 73.4
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 73.3
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 73.3
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 72.9
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 72.6
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 72.6
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 72.4
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 72.4
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 72.2
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 72.2
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 72.2
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 72.1
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 72.1
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 72.0
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 71.9
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 71.2
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 71.1
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 71.1
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 70.8
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 70.0
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 69.7
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 69.2
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 68.9
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 68.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 68.6
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 68.2
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 68.1
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 67.8
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 67.5
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 67.5
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 67.3
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 67.3
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 67.1
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 67.1
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 66.8
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 66.7
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 66.6
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 66.6
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 66.5
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 66.2
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 65.9
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 65.8
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 65.6
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 65.0
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 64.9
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 64.8
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 64.4
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 64.0
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 63.6
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 63.4
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 63.4
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 62.8
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 62.7
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 62.4
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 62.3
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 62.1
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 62.1
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 61.4
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 61.4
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 60.8
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 60.7
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 60.5
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 60.0
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 59.2
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 59.2
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 59.1
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 59.0
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 58.9
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 56.8
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 56.8
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 56.8
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 56.5
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 56.3
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 56.3
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 54.6
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 54.5
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 53.0
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 50.8
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 47.3
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Brain - Putamen (basal ganglia)
Average nTPM: 78.7
Samples: 205

Max nTPM: 136.4
Min nTPM: 49.3
Std nTPM: 15.6
Median nTPM: 76.4
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 136.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 130.2
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 129.1
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 128.8
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 128.4
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 116.0
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 115.9
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 112.8
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 112.2
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 107.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 107.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 107.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 106.2
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 104.0
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 102.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 102.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 101.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 100.8
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 100.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 98.1
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 98.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 98.0
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 96.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 95.1
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 95.1
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 95.1
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 95.0
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 94.9
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 94.4
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 94.1
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 94.1
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 93.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 93.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 91.9
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 91.6
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 91.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 91.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 90.5
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 90.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 90.1
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 90.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 89.7
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 89.3
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 88.8
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 88.3
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 88.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 88.2
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 88.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 87.8
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 87.8
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 87.6
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 87.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 87.2
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 86.9
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 86.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 86.7
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 85.9
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 85.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 85.6
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 85.1
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 84.7
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 84.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 84.4
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 84.3
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 83.6
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 82.6
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 82.6
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 82.4
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 81.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 81.2
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 81.2
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 81.1
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 81.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 81.0
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 80.8
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 80.5
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 80.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 80.4
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 80.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 80.0
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 79.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 79.3
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 79.2
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 78.8
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 78.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 78.6
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 78.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 78.3
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 78.3
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 78.2
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 77.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 77.8
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 77.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 77.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 77.5
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 77.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 77.2
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 77.1
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 76.9
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 76.8
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 76.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 76.6
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 76.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 76.3
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 76.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 76.1
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 75.9
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 75.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 75.4
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 75.4
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 75.1
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 75.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 74.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 74.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 74.7
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 74.4
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 74.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 74.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 74.3
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 74.3
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 73.9
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 73.8
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 73.4
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 73.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 73.2
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 73.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 73.1
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 72.7
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 72.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 72.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 72.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 72.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 72.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 72.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 72.2
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 72.1
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 72.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 72.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 71.9
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 71.9
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 71.6
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 71.6
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 70.7
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 70.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 70.2
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 70.0
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 69.4
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 69.1
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 69.0
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 69.0
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 68.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 68.7
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 68.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 68.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 68.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 67.8
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 67.7
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 67.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 67.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 66.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 66.8
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 66.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 66.6
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 65.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 65.7
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 65.3
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 65.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 65.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 64.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 64.3
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 64.2
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 64.1
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 64.0
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 63.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 63.2
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 62.8
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 62.8
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 62.0
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 61.9
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 61.8
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 61.7
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 61.5
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 60.9
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 60.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 60.0
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 60.0
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 59.9
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 59.7
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 59.7
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 59.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 59.1
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 58.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 58.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 58.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 58.2
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 58.2
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 57.9
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 57.1
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 56.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 55.5
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 53.9
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 53.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 51.3
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 50.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 49.3
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

38.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 36.4
FF:10164-103B2 76 years, female 36.4
Nucleus accumbens
Scaled Tags Per Million: 20.7
FF:10037-101F1 23-56 years, mixed 20.7
Putamen
Scaled Tags Per Million: 38.3
FF:10176-103C5 60 years, female 38.3
Globus pallidus
Scaled Tags Per Million: 29.2
FF:10161-103A8 76 years, female 34.0
FF:10175-103C4 60 years, female 24.3

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

58.5
Pig sample Sample description nTPM
Caudate
nTPM: 47.3
Samples: 4

Max nTPM: 49.0
Min nTPM: 44.1
Sample A Female 48.8
Sample B Female 47.4
Sample C Male 49.0
Sample D Male 44.1
Putamen
nTPM: 58.5
Samples: 4

Max nTPM: 69.9
Min nTPM: 45.1
Sample A Female 69.9
Sample B Female 45.1
Sample C Male 58.5
Sample D Male 60.4
Septum
nTPM: 49.7
Samples: 4

Max nTPM: 56.3
Min nTPM: 42.3
Sample A Female 56.3
Sample B Female 47.8
Sample C Male 42.3
Sample D Male 52.2
Ventral pallidum
nTPM: 51.0
Samples: 4

Max nTPM: 59.3
Min nTPM: 44.5
Sample A Female 44.5
Sample B Female 54.3
Sample C Male 45.9
Sample D Male 59.3

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

43.1
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 37.5
Samples: 4

Max nTPM: 50.1
Min nTPM: 29.3
Sample A Male 33.8
Sample B Male 50.1
Sample C Female 29.3
Sample D Female 36.7
Septum
nTPM: 43.0
Samples: 4

Max nTPM: 49.4
Min nTPM: 37.3
Sample A Male 45.5
Sample B Male 39.7
Sample C Female 49.4
Sample D Female 37.3
Ventral forebrain
nTPM: 43.1
Samples: 4

Max nTPM: 53.3
Min nTPM: 32.8
Sample A Male 46.0
Sample B Male 32.8
Sample C Female 53.3
Sample D Female 40.3

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

7.9
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 7.9
69079981 Antisense, RP_050324_01_A08, Mouse strain C57BL/6J (56 days, male) 7.9
Pallidum
Expression energy: 6.6
69079981 Antisense, RP_050324_01_A08, Mouse strain C57BL/6J (56 days, male) 6.6

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