HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:69.2 nTPM
HPA Brain:51.9 nTPM
GTEx:69.2 nTPM
FANTOM5:17.6 Scaled Tags Per Million
Pig:72.4 nTPM
Mouse:148.8 nTPM
Allen mouse:6.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA017921Antibody HPA073087
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 51.9
Sample id Sample description nTPM
Hippocampus
nTPM: 40.7
1898 Male, age 80, left hemisphere 46.0
2621 Female, age 67, right hemisphere 45.3
2529 Female, age 94, left hemisphere 42.8
1855 Male, age 76, left hemisphere 42.5
1911 Female, age 85, right hemisphere 36.1
2148 Female, age 91, left hemisphere 31.6
Dentate gyrus
nTPM: 36.7
2010 Male, age 76, both hemispheres 43.8
2530 Female, age 94, left hemisphere 37.1
2246 Female, age 85, both hemispheres 37.0
2528 Male, age 74, both hemispheres 36.1
1927 Female, age 91, both hemispheres 34.9
2531 Female, age 67, both hemispheres 31.2
Entorhinal gyrus
nTPM: 43.0
2764 Male, age 80, right hemisphere 48.2
1938 Female, age 85, left hemisphere 47.8
1787 Male, age 76, left hemisphere 45.2
2613 Female, age 94, left hemisphere 43.5
2686 Male, age 75, right hemisphere 36.9
2117 Female, age 91, right hemisphere 36.6
Hippocampus, CA1
nTPM: 37.6
2045 Male, age 76, both hemispheres 40.3
2527 Male, age 74, both hemispheres 39.8
2749 Male, age 80, left hemisphere 39.3
1873 Female, age 85, both hemispheres 38.1
2082 Female, age 91, right hemisphere 30.6
Hippocampus, CA2
nTPM: 38.0
1892 Male, age 76, both hemispheres 51.9
2437 Female, age 94, left hemisphere 39.0
2249 Male, age 74, both hemispheres 37.4
1940 Female, age 85, left hemisphere 36.5
1963 Male, age 80, left hemisphere 32.1
2113 Female, age 91, right hemisphere 31.3
Hippocampus, CA3
nTPM: 38.3
1867 Male, age 76, both hemispheres 47.0
2436 Male, age 74, both hemispheres 41.1
1891 Female, age 85, both hemispheres 38.6
2137 Male, age 80, left hemisphere 36.2
2861 Female, age 67, both hemispheres 33.8
2620 Female, age 94, left hemisphere 33.3
Parahippocampal cortex
nTPM: 44.8
1850 Male, age 80, both hemispheres 56.6
2018 Male, age 76, both hemispheres 48.9
2532 Female, age 72, left hemisphere 46.8
1933 Female, age 85, both hemispheres 46.2
2245 Female, age 91, both hemispheres 45.6
2692 Male, age 74, both hemispheres 43.0
1990 Female, age 91, right hemisphere 41.4
2622 Female, age 67, right hemisphere 40.5
2250 Female, age 67, right hemisphere 40.0
2693 Female, age 94, both hemispheres 39.3
Perirhinal gyrus
nTPM: 51.9
1847 Female, age 91, left hemisphere 56.3
1841 Female, age 85, right hemisphere 56.0
1794 Male, age 80, right hemisphere 55.2
2848 Male, age 76, right hemisphere 53.1
2521 Female, age 94, right hemisphere 39.2
Subiculum
nTPM: 41.1
2619 Male, age 74, both hemispheres 45.9
1901 Male, age 80, both hemispheres 42.7
2438 Female, age 94, left hemisphere 42.6
1977 Female, age 85, both hemispheres 41.4
2042 Male, age 76, both hemispheres 41.1
2729 Female, age 91, right hemisphere 32.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 69.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 69.2
Samples: 197

Max nTPM: 165.3
Min nTPM: 31.1
Std nTPM: 20.6
Median nTPM: 64.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 165.3
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 134.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 131.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 127.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 120.0
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 118.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 117.4
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 116.7
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 114.3
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 110.2
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 108.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 17.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 17.6
FF:10169-103B7 60 years, female 19.7
FF:10153-102I9 76 years, female 15.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 72.4
Pig sample Sample description nTPM
Subiculum
nTPM: 55.7
Samples: 4

Max nTPM: 73.2
Min nTPM: 49.2
Sample A Female 73.2
Sample B Female 49.9
Sample C Male 49.2
Sample D Male 50.6
Dorsal hippocampus
nTPM: 72.4
Samples: 4

Max nTPM: 97.2
Min nTPM: 54.2
Sample A Female 97.2
Sample B Female 65.8
Sample C Male 72.4
Sample D Male 54.2
Entorhinal cortex
nTPM: 58.0
Samples: 4

Max nTPM: 64.2
Min nTPM: 43.8
Sample A Female 62.7
Sample B Female 64.2
Sample C Male 61.4
Sample D Male 43.8
Ventral hippocampus
nTPM: 63.6
Samples: 4

Max nTPM: 74.2
Min nTPM: 47.2
Sample A Female 63.7
Sample B Female 47.2
Sample C Male 74.2
Sample D Male 69.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 148.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 148.8
Samples: 4

Max nTPM: 162.4
Min nTPM: 138.0
Sample A Male 138.0
Sample B Male 147.9
Sample C Female 162.4
Sample D Female 146.8
Hippocampal formation
nTPM: 132.6
Samples: 4

Max nTPM: 153.6
Min nTPM: 119.7
Sample A Male 153.6
Sample B Male 119.7
Sample C Female 119.7
Sample D Female 137.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 6.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.3
70429297 Antisense, RP_050614_01_D07, Mouse strain C57BL/6J (56 days, male) 6.3

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