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AHNAK
HPA
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  • AHNAK
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

AHNAK
Synonyms AHNAK1, MGC5395
Gene descriptioni

Full gene name according to HGNC.

AHNAK nucleoprotein
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Plasma proteins
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 11
Cytoband q12.3
Chromosome location (bp) 62433542 - 62556235
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

7
Ensembl ENSG00000124942 (version 109)
Entrez gene 79026
HGNC HGNC:347
UniProt Q09666 (UniProt - Evidence at protein level)
neXtProt NX_Q09666
GeneCards AHNAK
Antibodypedia AHNAK antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

May be required for neuronal cell differentiation.... show less
Gene summary (Entrez)i

Useful information about the gene from Entrez

The protein encoded by this gene is a large (700 kDa) structural scaffold protein consisting of a central domain with 128 aa repeats. The encoded protein may play a role in such diverse processes as blood-brain barrier formation, cell structure and migration, cardiac calcium channel regulation, and tumor metastasis. A much shorter variant encoding a 17 kDa isoform exists for this gene, and the shorter isoform initiates a feedback loop that regulates alternative splicing of this gene. [provided by RefSeq, Oct 2016]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
AHNAK-201
ENSP00000257247
ENST00000257247
Q09666
[Direct mapping] Neuroblast differentiation-associated protein AHNAK
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003723 [RNA binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005765 [lysosomal membrane]
GO:0005829 [cytosol]
GO:0005886 [plasma membrane]
GO:0005925 [focal adhesion]
GO:0015629 [actin cytoskeleton]
GO:0016020 [membrane]
GO:0030315 [T-tubule]
GO:0031982 [vesicle]
GO:0042383 [sarcolemma]
GO:0042802 [identical protein binding]
GO:0043034 [costamere]
GO:0043484 [regulation of RNA splicing]
GO:0044291 [cell-cell contact zone]
GO:0044548 [S100 protein binding]
GO:0045121 [membrane raft]
GO:0045296 [cadherin binding]
GO:0070062 [extracellular exosome]
GO:0097493 [structural molecule activity conferring elasticity]
GO:0098797 [plasma membrane protein complex]
GO:1901385 [regulation of voltage-gated calcium channel activity]
GO:1905686 [positive regulation of plasma membrane repair]
Show all
149 aa
16.1 kDa
No 0
AHNAK-202
ENSP00000367263
ENST00000378024
Q09666
[Direct mapping] Neuroblast differentiation-associated protein AHNAK
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003723 [RNA binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005765 [lysosomal membrane]
GO:0005829 [cytosol]
GO:0005886 [plasma membrane]
GO:0005925 [focal adhesion]
GO:0015629 [actin cytoskeleton]
GO:0016020 [membrane]
GO:0030315 [T-tubule]
GO:0031982 [vesicle]
GO:0042383 [sarcolemma]
GO:0043034 [costamere]
GO:0043484 [regulation of RNA splicing]
GO:0044291 [cell-cell contact zone]
GO:0044548 [S100 protein binding]
GO:0045121 [membrane raft]
GO:0045296 [cadherin binding]
GO:0070062 [extracellular exosome]
GO:0097493 [structural molecule activity conferring elasticity]
GO:0098797 [plasma membrane protein complex]
GO:1901385 [regulation of voltage-gated calcium channel activity]
GO:1905686 [positive regulation of plasma membrane repair]
Show all
5890 aa
629.1 kDa
No 0
AHNAK-204
ENSP00000435357
ENST00000528508
E9PKR9
[Direct mapping] Neuroblast differentiation-associated protein AHNAK
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
Show all
123 aa
13.6 kDa
No 0
AHNAK-205
ENSP00000433789
ENST00000530124
E9PJC6
[Direct mapping] Neuroblast differentiation-associated protein AHNAK
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
Show all
131 aa
14.5 kDa
No 0
AHNAK-206
ENSP00000433286
ENST00000530285
E9PLK4
[Direct mapping] Neuroblast differentiation-associated protein AHNAK
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
Show all
144 aa
15.9 kDa
No 0
AHNAK-207
ENSP00000436845
ENST00000531324
E9PQE3
[Direct mapping] Neuroblast differentiation-associated protein AHNAK
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
Show all
85 aa
9.3 kDa
No 0
AHNAK-208
ENSP00000433635
ENST00000533365
E9PJZ0
[Direct mapping] Neuroblast differentiation-associated protein AHNAK
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
Show all
121 aa
13.2 kDa
No 0

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