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CANCER GLIOMA Show tissue menu
BREAST CANCER CARCINOID CERVICAL CANCER COLORECTAL CANCER ENDOMETRIAL CANCER GLIOMA HEAD AND NECK CANCER LIVER CANCER LUNG CANCER LYMPHOMA
MELANOMA OVARIAN CANCER PANCREATIC CANCER PROSTATE CANCER RENAL CANCER SKIN CANCER STOMACH CANCER TESTIS CANCER THYROID CANCER UROTHELIAL CANCER
GBM TCGA GBM VALIDATION PROTEIN GBM CPTAC
Dictionary
Glioma
Human cancer
Glioblastoma multiforme
GLIOBLASTOMA MULTIFORME (TCGA) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

MT2A is not prognostic in Glioblastoma Multiforme (TCGA)


Stage:
Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 1802.14
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
3-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
3-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 4241.0
Number of samples 141
Samples
Sample Description pTPM
TCGA-06-5412-01A 78 years, female, white, stage:'--, dead, 138 days 20049.9
TCGA-12-3652-01A 60 years, male, white, stage:'--, dead, 1062 days 18856.6
TCGA-26-5133-01A 59 years, male, white, stage:'--, alive, 452 days 17693.7
TCGA-06-0184-01A 63 years, male, white, stage:'--, dead, 2126 days 17272.0
TCGA-02-0055-01A 62 years, female, white, stage:'--, dead, 76 days 13295.0
TCGA-19-4065-01A 36 years, male, white, stage:'--, alive, 214 days 11704.5
TCGA-28-2509-01A 77 years, female, white, stage:'--, alive, 145 days 11606.1
TCGA-28-2513-01A 69 years, female, white, stage:'--, alive, 222 days 11565.1
TCGA-14-0789-01A 54 years, male, white, stage:'--, dead, 342 days 11342.8
TCGA-14-1034-01A 60 years, female, stage:'--, dead, 485 days 11014.3
TCGA-19-2625-01A 76 years, female, white, stage:'--, dead, 124 days 10793.5
TCGA-06-0190-01A 62 years, male, white, stage:'--, dead, 317 days 10676.8
TCGA-76-4932-01A 50 years, female, white, stage:'--, dead, 1458 days 10038.5
TCGA-19-2620-01A 70 years, male, white, stage:'--, dead, 148 days 9882.2
TCGA-06-0644-01A 71 years, male, black or african american, stage:'--, dead, 384 days 9264.7
TCGA-41-4097-01A 63 years, female, white, stage:'--, dead, 6 days 9072.5
TCGA-41-2572-01A 67 years, male, white, stage:'--, dead, 406 days 8539.3
TCGA-06-5414-01A 61 years, male, white, stage:'--, alive, 273 days 8133.3
TCGA-06-0187-01A 69 years, male, white, stage:'--, dead, 828 days 7657.5
TCGA-32-4213-01A 47 years, female, white, stage:'--, alive, 604 days 7464.1
TCGA-12-3653-01A 34 years, female, white, stage:'--, dead, 442 days 7412.8
TCGA-27-1832-01A 59 years, female, white, stage:'--, dead, 300 days 7369.7
TCGA-12-0619-01A 60 years, male, white, stage:'--, dead, 1062 days 6946.2
TCGA-06-2561-01A 53 years, female, white, stage:'--, dead, 537 days 6873.9
TCGA-27-2528-01A 62 years, male, white, stage:'--, dead, 480 days 6727.2
TCGA-06-0645-01A 55 years, female, white, stage:'--, dead, 175 days 6656.0
TCGA-06-0747-01A 53 years, male, white, stage:'--, dead, 82 days 6522.0
TCGA-27-2524-01A 56 years, male, white, stage:'--, dead, 231 days 6507.4
TCGA-06-0141-01A 62 years, male, white, stage:'--, dead, 313 days 6409.0
TCGA-28-2514-01A 45 years, male, asian, stage:'--, alive, 160 days 6342.0
TCGA-06-0210-01A 72 years, female, white, stage:'--, dead, 225 days 5985.8
TCGA-32-1982-01A 76 years, female, white, stage:'--, dead, 142 days 5860.5
TCGA-06-5410-01A 72 years, female, white, stage:'--, dead, 108 days 5795.6
TCGA-19-2619-01A 55 years, female, black or african american, stage:'--, alive, 294 days 5588.2
TCGA-32-2632-01A 80 years, male, white, stage:'--, dead, 269 days 5343.4
TCGA-32-1970-01A 59 years, male, white, stage:'--, dead, 468 days 5241.3
TCGA-27-2526-01A 79 years, female, white, stage:'--, dead, 87 days 5192.9
TCGA-15-0742-01A 65 years, male, white, stage:'--, dead, 419 days 5104.0
TCGA-12-5295-01A 60 years, female, white, stage:'--, dead, 454 days 5093.3
TCGA-12-5299-01A 56 years, female, white, stage:'--, dead, 98 days 4751.3
TCGA-06-0168-01A 59 years, female, white, stage:'--, dead, 598 days 4622.9
TCGA-26-5139-01A 65 years, female, white, stage:'--, alive, 48 days 4369.4
TCGA-14-1829-01A 57 years, male, black or african american, stage:'--, alive, 218 days 4305.4
TCGA-26-1442-01A 43 years, male, white, stage:'--, alive, 953 days 4181.2
TCGA-06-0139-01A 40 years, male, white, stage:'--, dead, 362 days 4146.7
TCGA-06-5417-01A 45 years, female, white, stage:'--, alive, 155 days 4104.4
TCGA-19-2629-01A 60 years, male, white, stage:'--, dead, 737 days 4007.0
TCGA-12-0821-01A 62 years, male, white, stage:'--, dead, 323 days 3988.9
TCGA-32-2638-01A 67 years, male, white, stage:'--, dead, 766 days 3901.3
TCGA-32-2615-01A 62 years, male, white, stage:'--, dead, 485 days 3895.9
TCGA-28-5204-01A 72 years, male, white, stage:'--, dead, 454 days 3868.2
TCGA-06-0138-01A 43 years, male, white, stage:'--, dead, 737 days 3824.6
TCGA-76-4931-01A 70 years, female, white, stage:'--, dead, 279 days 3818.7
TCGA-06-5418-01A 75 years, female, white, stage:'--, dead, 83 days 3789.0
TCGA-06-0750-01A 43 years, male, white, stage:'--, dead, 28 days 3757.5
TCGA-14-2554-01A 52 years, female, white, stage:'--, dead, 532 days 3738.4
TCGA-12-3650-01A 46 years, male, white, stage:'--, dead, 333 days 3684.7
TCGA-06-0130-01A 54 years, male, white, stage:'--, dead, 394 days 3630.9
TCGA-06-5856-01A 58 years, male, white, stage:'--, dead, 114 days 3588.3
TCGA-26-5132-01A 74 years, male, white, stage:'--, alive, 286 days 3580.8
TCGA-41-3915-01A 48 years, male, white, stage:'--, dead, 360 days 3567.7
TCGA-28-5216-01A 52 years, male, white, stage:'--, alive, 415 days 3560.6
TCGA-06-5859-01A 63 years, male, white, stage:'--, alive, 139 days 3557.1
TCGA-02-2486-01A 64 years, male, white, stage:'--, dead, 618 days 3491.8
TCGA-06-0745-01A 59 years, male, white, stage:'--, dead, 239 days 3463.5
TCGA-14-0787-01A 69 years, male, asian, stage:'--, dead, 68 days 3377.5
TCGA-76-4929-01A 76 years, female, white, stage:'--, dead, 111 days 3287.9
TCGA-06-5408-01A 54 years, female, white, stage:'--, dead, 357 days 3232.0
TCGA-06-0156-01A 57 years, male, white, stage:'--, dead, 178 days 3186.4
TCGA-28-5207-01A 71 years, male, white, stage:'--, dead, 343 days 3166.2
TCGA-32-2616-01A 48 years, female, white, stage:'--, dead, 224 days 3121.0
TCGA-27-1831-01A 66 years, male, white, stage:'--, dead, 505 days 2991.9
TCGA-27-2519-01A 48 years, male, white, stage:'--, dead, 550 days 2888.5
TCGA-02-0047-01A 78 years, male, white, stage:'--, dead, 448 days 2865.1
TCGA-32-5222-01A 66 years, male, white, stage:'--, dead, 585 days 2793.9
TCGA-19-2624-01A 51 years, male, white, stage:'--, dead, 5 days 2784.2
TCGA-06-0125-01A 63 years, female, white, stage:'--, dead, 1448 days 2765.8
TCGA-06-0211-01A 47 years, male, white, stage:'--, dead, 360 days 2738.4
TCGA-14-0817-01A 69 years, female, white, stage:'--, dead, 164 days 2591.5
TCGA-08-0386-01A 74 years, male, white, stage:'--, dead, 548 days 2564.5
TCGA-14-1823-01A 58 years, female, white, stage:'--, dead, 543 days 2523.7
TCGA-15-1444-01A 21 years, male, white, stage:'--, dead, 1537 days 2490.5
TCGA-28-5209-01A 66 years, female, white, stage:'--, alive, 442 days 2479.9
TCGA-06-2570-01A 21 years, female, white, stage:'--, alive, 958 days 2455.2
TCGA-16-0846-01A 85 years, male, white, stage:'--, dead, 119 days 2426.1
TCGA-06-0219-01A 67 years, male, white, stage:'--, dead, 22 days 2422.9
TCGA-06-0878-01A 74 years, male, white, stage:'--, alive, 218 days 2400.1
TCGA-06-2559-01A 83 years, male, white, stage:'--, dead, 150 days 2338.7
TCGA-26-5134-01A 74 years, male, white, stage:'--, alive, 167 days 2335.7
TCGA-06-2565-01A 59 years, male, asian, stage:'--, dead, 506 days 2320.8
TCGA-06-0743-01A 69 years, male, white, stage:'--, dead, 803 days 2269.1
TCGA-02-2485-01A 53 years, male, black or african american, stage:'--, alive, 470 days 2214.3
TCGA-12-0616-01A 36 years, female, white, stage:'--, dead, 448 days 2187.6
TCGA-06-0174-01A 54 years, male, white, stage:'--, dead, 98 days 2158.8
TCGA-28-5208-01A 52 years, male, white, stage:'--, dead, 544 days 2129.4
TCGA-76-4927-01A 58 years, male, white, stage:'--, dead, 535 days 2125.5
TCGA-06-2562-01A 81 years, male, white, stage:'--, dead, 382 days 2091.4
TCGA-28-5215-01A 62 years, female, white, stage:'--, dead, 335 days 2090.7
TCGA-27-2521-01A 34 years, male, white, stage:'--, dead, 510 days 2014.2
TCGA-32-1980-01A 72 years, male, white, stage:'--, dead, 36 days 2002.1
TCGA-27-1837-01A 36 years, male, white, stage:'--, dead, 427 days 2001.7
TCGA-06-2564-01A 50 years, male, white, stage:'--, alive, 181 days 1959.8
TCGA-06-0646-01A 60 years, male, white, stage:'--, dead, 175 days 1917.1
TCGA-41-2571-01A 89 years, male, white, stage:'--, dead, 26 days 1882.9
TCGA-06-5411-01A 51 years, male, white, stage:'--, dead, 254 days 1847.7
TCGA-76-4925-01A 76 years, male, white, stage:'--, dead, 146 days 1802.1
TCGA-28-1753-01A 53 years, male, white, stage:'--, alive, 37 days 1777.2
TCGA-06-0132-01A 49 years, male, white, stage:'--, dead, 771 days 1776.3
TCGA-28-5220-01A 67 years, male, white, stage:'--, dead, 388 days 1766.6
TCGA-32-2634-01A 82 years, male, white, stage:'--, alive, 693 days 1744.3
TCGA-27-1835-01A 53 years, female, white, stage:'--, dead, 648 days 1723.2
TCGA-06-2567-01A 65 years, male, white, stage:'--, dead, 133 days 1691.6
TCGA-06-1804-01A 81 years, female, white, stage:'--, dead, 414 days 1690.0
TCGA-06-2563-01A 72 years, female, white, stage:'--, alive, 932 days 1599.8
TCGA-06-0749-01A 50 years, male, black or african american, stage:'--, dead, 82 days 1595.5
TCGA-06-0158-01A 73 years, male, white, stage:'--, dead, 329 days 1539.1
TCGA-06-0686-01A 53 years, male, white, stage:'--, dead, 432 days 1535.3
TCGA-27-1830-01A 57 years, male, white, stage:'--, dead, 154 days 1436.4
TCGA-06-0129-01A 30 years, male, asian, stage:'--, dead, 1024 days 1372.2
TCGA-06-0882-01A 30 years, male, white, stage:'--, dead, 632 days 1326.9
TCGA-12-0618-01A 49 years, male, white, stage:'--, dead, 395 days 1316.6
TCGA-41-5651-01A 59 years, female, black or african american, stage:'--, dead, 460 days 1312.0
TCGA-26-5135-01A 72 years, female, white, stage:'--, dead, 270 days 1306.7
TCGA-27-2523-01A 63 years, male, white, stage:'--, dead, 489 days 1305.6
TCGA-06-5416-01A 23 years, female, white, stage:'--, alive, 204 days 1214.6
TCGA-06-0157-01A 63 years, female, white, stage:'--, dead, 97 days 1213.5
TCGA-02-2483-01A 43 years, male, asian, stage:'--, alive, 466 days 1182.9
TCGA-06-2558-01A 75 years, female, white, stage:'--, dead, 380 days 1105.2
TCGA-06-2557-01A 76 years, male, black or african american, stage:'--, dead, 33 days 1037.1
TCGA-06-0238-01A 46 years, male, white, stage:'--, dead, 405 days 953.5
TCGA-06-0178-01A 38 years, male, white, stage:'--, dead, 2681 days 937.7
TCGA-14-1825-01A 70 years, male, white, stage:'--, dead, 232 days 907.9
TCGA-06-5413-01A 67 years, male, white, stage:'--, alive, 268 days 876.2
TCGA-28-5218-01A 63 years, male, white, stage:'--, dead, 157 days 856.2
TCGA-27-1834-01A 56 years, male, white, stage:'--, dead, 1233 days 845.4
TCGA-06-5858-01A 45 years, female, white, stage:'--, alive, 187 days 816.7
TCGA-19-5960-01A 56 years, male, white, stage:'--, dead, 455 days 803.5
TCGA-19-1390-01A 63 years, female, white, stage:'--, dead, 772 days 767.0
TCGA-06-0744-01A 66 years, male, white, stage:'--, dead, 1426 days 766.8
TCGA-14-0871-01A 74 years, female, white, stage:'--, dead, 880 days 313.7
TCGA-06-2569-01A 24 years, female, black or african american, stage:'--, alive, 13 days 248.1
Show allShow less
GLIOBLASTOMA MULTIFORME (VALIDATION) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

MT2A is not prognostic in Glioblastoma Multiforme (validation)


Stage:
Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 208.66
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
3-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
3-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 269.6
Number of samples 58
Samples
Sample Description pTPM
AK178 N, NA, stage:NA, dead, 240 days 1089.4
AK055 N, NA, stage:NA, dead, 240 days 812.1
AK139 N, NA, stage:NA, dead, 270 days 712.4
AK091 N, NA, stage:NA, dead, 210 days 675.3
AK195 N, NA, stage:NA, dead, 390 days 668.3
AK183 N, NA, stage:NA, alive, 360 days 614.7
AK133 N, NA, stage:NA, dead, 360 days 611.1
AK072 N, NA, stage:NA, dead, 150 days 602.0
AK236 N, NA, stage:NA, dead, 360 days 593.2
AK035 N, NA, stage:NA, dead, 210 days 570.1
AK226 N, NA, stage:NA, dead, 360 days 522.2
AK188 N, NA, stage:NA, alive, 420 days 497.9
AK153 N, NA, stage:NA, dead, 240 days 495.9
AK205 N, NA, stage:NA, dead, 120 days 433.9
AK218 N, NA, stage:NA, dead, 180 days 406.7
AK068 N, NA, stage:NA, alive, 360 days 380.7
AK098 N, NA, stage:NA, dead, 660 days 298.0
AK089 N, NA, stage:NA, dead, 330 days 293.4
AK088 N, NA, stage:NA, dead, 360 days 292.0
AK049 N, NA, stage:NA, dead, 180 days 257.0
AK006 N, NA, stage:NA, dead, 360 days 229.0
AK100 N, NA, stage:NA, alive, 960 days 228.9
AK117 N, NA, stage:NA, dead, 210 days 227.5
AK051 N, NA, stage:NA, dead, 360 days 216.4
AK081 N, NA, stage:NA, dead, 180 days 215.1
AK123 N, NA, stage:NA, dead, 180 days 211.6
AK071 N, NA, stage:NA, dead, 540 days 205.7
AK076 N, NA, stage:NA, alive, 660 days 189.7
AK158 N, NA, stage:NA, dead, 360 days 186.0
AK099 N, NA, stage:NA, dead, 420 days 185.2
AK005 N, NA, stage:NA, dead, 240 days 178.2
AK185 N, NA, stage:NA, alive, 330 days 174.8
AK227 N, NA, stage:NA, alive, 300 days 167.9
AK085 N, NA, stage:NA, alive, 660 days 164.7
AK074 N, NA, stage:NA, alive, 300 days 160.1
AK165 N, NA, stage:NA, alive, 360 days 156.9
AK231 N, NA, stage:NA, dead, 240 days 147.1
AK041 N, NA, stage:NA, alive, 810 days 140.6
AK134 N, NA, stage:NA, dead, 360 days 127.1
AK053 N, NA, stage:NA, dead, 300 days 125.7
AK167 N, NA, stage:NA, dead, 180 days 119.9
AK156 N, NA, stage:NA, dead, 330 days 100.1
AK216 N, NA, stage:NA, dead, 360 days 98.1
AK142 N, NA, stage:NA, alive, 90 days 96.5
AK149 N, NA, stage:NA, dead, 420 days 94.7
AK102 N, NA, stage:NA, alive, 1740 days 92.7
AK015 N, NA, stage:NA, alive, 720 days 84.4
AK103 N, NA, stage:NA, alive, 1320 days 78.4
AK043 N, NA, stage:NA, alive, 660 days 69.3
AK079 N, NA, stage:NA, dead, 210 days 65.3
AK199 N, NA, stage:NA, alive, 1860 days 55.7
AK002 N, NA, stage:NA, dead, 570 days 48.5
AK173 N, NA, stage:NA, dead, 180 days 39.3
AK030 N, NA, stage:NA, dead, 120 days 34.1
AK003 N, NA, stage:NA, dead, 600 days 33.3
AK066 N, NA, stage:NA, alive, 960 days 27.1
AK124 N, NA, stage:NA, alive, 1920 days 26.6
AK213 N, NA, stage:NA, alive, 2010 days 12.5
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GLIOBLASTOMA MULTIFORME - Protein relative expression (CPTAC)
Number of samples 110
Samples
Sample ID Sample type nRPX
CPT0093450003 Tumor 2.6
CPT0079790003 Tumor 1.6
CPT0093590003 Tumor 1.4
CPT0167640003 Tumor 1.4
CPT0206230003 Tumor 1.3
CPT0190360004 Tumor 1.3
CPT0087680003 Tumor 1.2
CPT0168080003 Tumor 1.1
CPT0189570004 Tumor 1.1
CPT0078580003 Tumor 1.0
CPT0125220003 Tumor 1.0
CPT0218690004 Tumor 0.9
CPT0225760003 Tumor 0.7
CPT0205890003 Tumor 0.6
CPT0127480003 Tumor 0.5
CPT0218830004 Tumor 0.5
CPT0093360003 Tumor 0.5
CPT0219080004 Tumor 0.5
CPT0217100003 Tumor 0.4
CPT0209440003 Tumor 0.4
CPT0093550003 Tumor 0.4
CPT0205570003 Tumor 0.4
CPT0221180003 Tumor 0.4
CPT0168480003 Tumor 0.3
CPT0201710003 Tumor 0.3
CPT0123530003 Tumor 0.3
CPT0182500003 Tumor 0.3
CPT0204370003 Normal 0.3
CPT0217060003 Tumor 0.3
CPT0186100003 Tumor 0.2
CPT0224330003 Tumor 0.2
CPT0217190003 Tumor 0.2
CPT0087950003 Tumor 0.2
CPT0190240004 Tumor 0.2
CPT0218960004 Tumor 0.1
CPT0167970003 Tumor 0.1
CPT0218330004 Tumor 0.1
CPT0168270003 Tumor 0.1
CPT0218670003 Tumor 0.0
CPT0206000004 Tumor 0.0
CPT0167750004 Tumor 0.0
CPT0196850003 Tumor 0.0
CPT0189250003 Tumor 0.0
CPT0206880003 Tumor 0.0
CPT0189460003 Tumor -0.1
CPT0168720003 Tumor -0.1
CPT0189750004 Tumor -0.1
CPT0199770003 Tumor -0.1
CPT0206330003 Tumor -0.2
CPT0168380003 Tumor -0.2
CPT0218890004 Tumor -0.3
CPT0217880003 Tumor -0.4
CPT0168590003 Tumor -0.4
CPT0162020003 Tumor -0.4
CPT0175060003 Tumor -0.4
CPT0204420003 Normal -0.5
CPT0224540004 Tumor -0.5
CPT0206560003 Tumor -0.5
CPT0204330003 Normal -0.5
CPT0127420003 Tumor -0.6
CPT0092440003 Tumor -0.6
CPT0205780003 Tumor -0.6
CPT0204360003 Normal -0.6
CPT0205670004 Tumor -0.6
CPT0224600003 Tumor -0.6
CPT0204380003 Normal -0.7
CPT0168830003 Tumor -0.7
CPT0093510003 Tumor -0.7
CPT0125510003 Tumor -0.7
CPT0104220003 Tumor -0.8
CPT0162100003 Tumor -0.8
CPT0208980003 Tumor -0.8
CPT0217430008 Tumor -0.8
CPT0225730003 Tumor -0.8
CPT0162140003 Tumor -0.9
CPT0204390003 Normal -0.9
CPT0205450004 Tumor -0.9
CPT0204350003 Normal -0.9
CPT0182550003 Tumor -0.9
CPT0182580003 Tumor -0.9
CPT0206450003 Tumor -1.0
CPT0167530003 Tumor -1.2
CPT0224390004 Tumor -1.2
CPT0171580008 Tumor -1.2
CPT0189850004 Tumor -1.2
CPT0204410003 Normal -1.2
CPT0204400003 Normal -1.3
CPT0217710008 Tumor -1.3
CPT0167860004 Tumor -1.4
CPT0228220003 Tumor -1.4
CPT0218770003 Tumor -1.4
CPT0161730003 Tumor -1.5
CPT0002410011 Tumor -1.5
CPT0206780003 Tumor -1.5
CPT0104330003 Tumor -1.5
CPT0207030003 Tumor -1.5
CPT0204340003 Normal -1.5
CPT0064890003 Tumor -1.6
CPT0217000004 Tumor -2.0
CPT0125570003 Tumor -2.0
CPT0207090003 Tumor -2.1
CPT0089150003 Tumor -2.1
CPT0206670004 Tumor -2.2
CPT0071100003 Tumor -2.2
CPT0064650003 Tumor -2.2
CPT0189650004 Tumor -2.3
CPT0087730003 Tumor -2.3
CPT0087570003 Tumor -2.5
CPT0216920008 Tumor -2.5
CPT0206110003 Tumor -2.5
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GLIOMA - Protein expressioni

A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.

Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

Pending cancer tissue analysis

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