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PPP1R12C
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  • PPP1R12C
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:96.7 nTPM
FANTOM5:15.1 Scaled Tags Per Million
Pig:20.7 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA043532
Glial cells Not detected
Neuronal cells Not detected


CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

96.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 96.7
Samples: 246

Max nTPM: 167.8
Min nTPM: 38.0
Std nTPM: 20.3
Median nTPM: 96.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 167.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 155.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 150.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 143.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 139.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 138.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 138.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 135.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 133.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 132.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 130.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 128.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 128.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 128.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 127.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 127.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 126.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 125.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 125.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 125.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 124.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 123.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 122.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 122.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 122.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 122.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 121.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 121.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 120.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 120.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 120.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 120.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 120.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 119.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 119.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 119.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 118.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 118.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 118.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 117.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 117.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 116.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 116.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 116.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 115.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 115.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 115.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 114.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 113.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 113.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 112.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 112.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 112.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 112.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 111.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 111.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 110.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 110.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 109.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 109.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 109.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 109.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 108.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 108.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 108.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 108.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 107.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 107.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 107.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 107.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 107.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 107.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 107.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 107.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 107.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 106.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 106.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 106.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 105.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 105.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 105.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 105.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 105.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 104.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 104.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 104.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 104.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 104.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 103.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 103.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 102.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 102.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 102.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 102.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 102.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 101.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 101.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 101.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 101.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 101.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 101.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 101.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 101.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 101.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 100.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 100.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 100.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 99.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 99.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 99.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 98.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 98.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 98.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 98.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 97.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 97.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 97.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 97.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 96.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 96.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 96.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 96.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 96.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 96.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 96.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 96.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 96.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 95.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 95.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 95.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 95.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 95.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 94.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 94.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 94.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 94.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 94.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 94.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 94.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 94.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 93.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 92.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 92.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 92.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 91.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 91.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 91.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 90.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 90.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 90.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 90.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 90.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 89.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 89.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 89.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 89.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 89.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 88.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 88.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 88.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 88.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 88.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 88.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 88.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 87.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 87.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 87.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 87.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 86.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 86.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 86.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 86.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 86.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 86.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 85.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 85.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 85.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 85.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 85.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 84.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 84.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 84.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 83.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 83.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 83.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 83.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 83.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 83.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 83.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 82.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 81.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 81.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 80.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 80.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 79.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 79.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 79.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 78.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 78.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 78.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 78.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 77.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 76.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 76.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 76.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 76.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 75.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 75.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 75.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 74.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 74.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 73.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 73.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 72.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 72.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 72.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 72.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 72.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 72.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 71.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 71.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 71.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 71.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 71.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 71.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 70.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 70.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 70.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 69.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 68.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 67.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 66.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 66.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 64.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 64.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 64.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 64.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 59.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 59.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 57.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 56.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 52.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 51.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 51.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 43.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 38.0
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

15.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 15.1
FF:10164-103B2 76 years, female 15.1

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

20.7
Pig sample Sample description nTPM
Caudate
nTPM: 20.7
Samples: 4

Max nTPM: 25.2
Min nTPM: 15.0
Sample A Female 15.0
Sample B Female 22.6
Sample C Male 25.2
Sample D Male 20.0

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