We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
CHCHD5
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • CHCHD5
TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:19.9 nTPM
HPA Brain:19.0 nTPM
GTEx:19.9 nTPM
Pig:8.0 nTPM
Mouse:9.7 nTPM
Allen mouse:0.0 Expression energy

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

19.0
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 14.6
1961 Female, age 42, unknown 14.6
2226 Male, age 75, left hemisphere 14.5
Dorsomedial nucleus
nTPM: 12.8
2041 Female, age 72, unknown 14.5
1989 Male, age 62, unknown 13.8
2017 Female, age 42, unknown 9.9
Lateral hypothalamic area
nTPM: 15.0
1791 Male, age 80, right hemisphere 23.3
2271 Male, age 75, both hemispheres 15.0
2228 Male, age 66, unknown 12.4
2412 Male, age 62, unknown 9.3
Mammillary body
nTPM: 16.2
1945 Male, age 80, right hemisphere 17.7
1923 Female, age 72, unknown 17.6
1948 Female, age 72, unknown 17.0
2413 Male, age 66, unknown 14.9
1834 Female, age 42, unknown 13.9
Paraventricular nucleus
nTPM: 11.9
2700 Male, age 62, unknown 11.9
Preoptic area
nTPM: 13.1
2414 Female, age 72, unknown 13.7
1861 Female, age 42, unknown 13.5
1907 Male, age 80, right hemisphere 12.2
Supraoptic nucleus
nTPM: 19.0
2043 Male, age 62, unknown 20.2
1894 Female, age 72, unknown 19.7
2835 Female, age 72, unknown 17.3
Ventromedial nucleus
nTPM: 11.2
1982 Female, age 72, unknown 11.9
1822 Female, age 42, unknown 10.6

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

19.9
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 19.9
Samples: 202

Max nTPM: 53.4
Min nTPM: 7.0
Std nTPM: 5.9
Median nTPM: 18.8
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 53.4
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 45.1
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 36.4
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 33.9
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 33.8
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 33.5
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 31.8
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 31.3
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 30.8
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 30.8
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 30.0
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 29.7
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 29.4
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 29.0
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 28.4
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 28.2
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 27.8
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 27.2
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 27.0
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 26.9
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 26.8
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 26.7
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 26.5
GTEX-1H3VE-0011-R8b-SM-A9G1L 40-49 years, male 26.4
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 26.3
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 26.1
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 26.0
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 25.8
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 25.8
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 25.6
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 25.3
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 25.3
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 25.2
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 25.1
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 24.7
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 24.7
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 24.5
GTEX-14LLW-0011-R8a-SM-62LFG 70-79 years, female 24.2
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 24.2
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 23.8
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 23.8
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 23.7
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 23.7
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 23.6
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 23.4
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 23.2
GTEX-Q2AG-0011-R8A-SM-2HMK5 40-49 years, female 23.2
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 23.1
GTEX-183WM-0011-R8a-SM-7189W 70-79 years, female 23.0
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 22.9
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 22.8
GTEX-NL3H-0011-R8a-SM-DIPDY 60-69 years, male 22.7
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 22.4
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 22.3
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 22.2
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 22.2
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 22.0
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 22.0
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 22.0
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 21.8
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 21.8
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 21.5
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 21.4
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 21.3
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 21.3
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 21.3
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 21.1
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 21.1
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 21.1
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 21.0
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 20.8
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 20.8
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 20.8
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 20.7
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 20.5
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 20.4
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 20.4
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 20.3
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 20.3
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 20.2
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 20.1
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 20.1
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 20.0
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 19.9
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 19.9
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 19.8
GTEX-TSE9-0011-R8A-SM-3DB7R 60-69 years, female 19.7
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 19.7
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 19.6
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 19.6
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 19.6
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 19.6
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 19.5
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 19.5
GTEX-XLM4-0011-R8A-SM-4AT44 60-69 years, male 19.5
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 19.4
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 19.4
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 19.1
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 18.9
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 18.9
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 18.8
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 18.8
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 18.8
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 18.7
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 18.7
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 18.7
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 18.7
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 18.7
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 18.6
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 18.6
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 18.5
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 18.4
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 18.3
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 18.2
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 18.2
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 18.1
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 18.1
GTEX-145MI-0011-R8b-SM-5PNZ9 60-69 years, female 18.0
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 18.0
GTEX-N7MT-0011-R8a-SM-2I5GU 60-69 years, female 18.0
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 18.0
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 17.9
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 17.9
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 17.9
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 17.9
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 17.8
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 17.8
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 17.7
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 17.7
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 17.7
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 17.6
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 17.4
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 17.4
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 17.3
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 17.2
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 17.2
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 17.2
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 17.0
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 17.0
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 17.0
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 16.9
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 16.8
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 16.8
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 16.8
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 16.7
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 16.7
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 16.6
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 16.6
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 16.5
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 16.5
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 16.4
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 16.3
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 16.3
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 16.3
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 16.2
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 16.2
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 16.1
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 16.1
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 15.9
GTEX-RU72-0011-R8A-SM-2TF61 50-59 years, female 15.6
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 15.6
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 15.5
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 15.4
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 15.4
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 15.2
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 15.1
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 14.9
GTEX-QDT8-0011-R8A-SM-32PKE 30-39 years, female 14.9
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 14.9
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 14.8
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 14.8
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 14.7
GTEX-NPJ7-0011-R8a-SM-2I3G2 60-69 years, female 14.7
GTEX-R55E-0011-R8A-SM-2TC66 20-29 years, male 14.7
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 14.5
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 14.4
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 14.3
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 14.2
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 14.2
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 14.0
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 14.0
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 13.9
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 13.8
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 13.7
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 13.6
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 13.3
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 13.2
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 13.1
GTEX-OHPN-0011-R8A-SM-33HBT 60-69 years, female 12.9
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 12.7
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 12.6
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 12.1
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 12.1
GTEX-13NZ8-0011-R8b-SM-5KM48 60-69 years, female 12.0
GTEX-S7SE-0011-R8A-SM-2XCDG 50-59 years, male 12.0
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 11.4
GTEX-X4EP-0011-R8B-SM-4QASL 60-69 years, female 11.3
GTEX-18464-0011-R8a-SM-72D4Z 50-59 years, male 11.2
GTEX-13IVO-0011-R8a-SM-5L3DY 70-79 years, male 10.1
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 9.5
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 7.5
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 7.0
Show allShow less

HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

8.0
Pig sample Sample description nTPM
Hypothalamus
nTPM: 8.0
Samples: 4

Max nTPM: 9.0
Min nTPM: 6.4
Sample A Female 6.4
Sample B Female 9.0
Sample C Male 8.4
Sample D Male 8.2

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

9.7
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 9.7
Samples: 4

Max nTPM: 10.8
Min nTPM: 8.3
Sample A Male 10.7
Sample B Male 10.8
Sample C Female 8.9
Sample D Female 8.3

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.0
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.0
68444678 Antisense, RP_050111_02_C09, Mouse strain C57BL/6J (56 days, male) 0.0

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org