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GTF2F1
HPA
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  • GTF2F1
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

GTF2F1
Synonyms BTF4, RAP74, TF2F1, TFIIF
Gene descriptioni

Full gene name according to HGNC.

General transcription factor IIF subunit 1
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Plasma proteins
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 19
Cytoband p13.3
Chromosome location (bp) 6379572 - 6393981
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

4
Ensembl ENSG00000125651 (version 109)
Entrez gene 2962
HGNC HGNC:4652
UniProt P35269 (UniProt - Evidence at protein level)
neXtProt NX_P35269
GeneCards GTF2F1
Antibodypedia GTF2F1 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

DNA-binding
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Transcription, Transcription regulation
Gene summary (Entrez)i

Useful information about the gene from Entrez

Enables several functions, including RNA polymerase II general transcription initiation factor activity; phosphatase activator activity; and promoter-specific chromatin binding activity. Involved in several processes, including positive regulation of transcription by RNA polymerase II; response to virus; and transcription initiation from RNA polymerase II promoter. Located in cell junction and nucleoplasm. Part of transcription factor TFIID complex. [provided by Alliance of Genome Resources, Apr 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
GTF2F1-201
ENSP00000377969
ENST00000394456
P35269
[Direct mapping] General transcription factor IIF subunit 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001091 [RNA polymerase II general transcription initiation factor binding]
GO:0001096 [TFIIF-class transcription factor complex binding]
GO:0003677 [DNA binding]
GO:0003723 [RNA binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005669 [transcription factor TFIID complex]
GO:0005674 [transcription factor TFIIF complex]
GO:0006366 [transcription by RNA polymerase II]
GO:0006367 [transcription initiation at RNA polymerase II promoter]
GO:0006368 [transcription elongation by RNA polymerase II promoter]
GO:0009615 [response to virus]
GO:0016251 [RNA polymerase II general transcription initiation factor activity]
GO:0019211 [phosphatase activator activity]
GO:0019903 [protein phosphatase binding]
GO:0019904 [protein domain specific binding]
GO:0030054 [cell junction]
GO:0032091 [negative regulation of protein binding]
GO:0032968 [positive regulation of transcription elongation by RNA polymerase II]
GO:0032991 [protein-containing complex]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0045944 [positive regulation of transcription by RNA polymerase II]
GO:1990841 [promoter-specific chromatin binding]
Show all
517 aa
58.2 kDa
No 0
GTF2F1-202
ENSP00000469091
ENST00000593678
M0QXD6
[Direct mapping] Transcription initiation factor IIF subunit alpha
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003677 [DNA binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0006367 [transcription initiation at RNA polymerase II promoter]
GO:0030054 [cell junction]
GO:0032968 [positive regulation of transcription elongation by RNA polymerase II]
GO:0043231 [intracellular membrane-bounded organelle]
Show all
433 aa
48.6 kDa
No 0
GTF2F1-205
ENSP00000471403
ENST00000595047
M0R0R9
[Direct mapping] Transcription initiation factor IIF subunit alpha
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003677 [DNA binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0006367 [transcription initiation at RNA polymerase II promoter]
GO:0030054 [cell junction]
GO:0032968 [positive regulation of transcription elongation by RNA polymerase II]
Show all
381 aa
43.3 kDa
No 0
GTF2F1-206
ENSP00000471542
ENST00000598607
M0R0Z3
[Direct mapping] Transcription initiation factor IIF subunit alpha
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003677 [DNA binding]
GO:0005634 [nucleus]
GO:0006367 [transcription initiation at RNA polymerase II promoter]
GO:0032968 [positive regulation of transcription elongation by RNA polymerase II]
Show all
127 aa
14.7 kDa
No 0

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